Changeset a34b811 in sasmodels for sasmodels/models


Ignore:
Timestamp:
Mar 28, 2019 5:02:53 PM (5 years ago)
Author:
Paul Kienzle <pkienzle@…>
Branches:
master, ticket-1257-vesicle-product, ticket_1156, ticket_822_more_unit_tests
Children:
db1d9d5
Parents:
e5cb3df
Message:

use radius_effective/radius_effective_mode/radius_effective_modes consistently throughout the code

Location:
sasmodels/models
Files:
60 edited

Legend:

Unmodified
Added
Removed

  • sasmodels/models/_spherepy.py

    r0507e09 ra34b811  
    4848---------------------------- 
    4949 
    50 * **Author: P Kienzle**  
    51 * **Last Modified by:**  
     50* **Author: P Kienzle** 
     51* **Last Modified by:** 
    5252* **Last Reviewed by:** S King and P Parker **Date:** 2013/09/09 and 2014/01/06 
    5353* **Source added by :** Steve King **Date:** March 25, 2019 
    … …  
    8383    return 1.333333333333333 * pi * radius ** 3 
    8484 
    85 def effective_radius(mode, radius): 
     85def radius_effective(mode, radius): 
    8686    """Calculate R_eff for sphere""" 
    87     return radius 
     87    return radius if mode else 0. 
    8888 
    8989def Iq(q, sld, sld_solvent, radius): 

  • sasmodels/models/barbell.c

    r99658f6 ra34b811  
    8585 
    8686static double 
    87 effective_radius(int mode, double radius_bell, double radius, double length) 
     87radius_effective(int mode, double radius_bell, double radius, double length) 
    8888{ 
    8989    switch (mode) { 

  • sasmodels/models/barbell.py

    r0507e09 ra34b811  
    126126source = ["lib/polevl.c", "lib/sas_J1.c", "lib/gauss76.c", "barbell.c"] 
    127127have_Fq = True 
    128 effective_radius_type = [ 
     128radius_effective_modes = [ 
    129129    "equivalent cylinder excluded volume", "equivalent volume sphere", 
    130130    "radius", "half length", "half total length", 

  • sasmodels/models/capped_cylinder.c

    r99658f6 ra34b811  
    107107 
    108108static double 
    109 effective_radius(int mode, double radius, double radius_cap, double length) 
     109radius_effective(int mode, double radius, double radius_cap, double length) 
    110110{ 
    111111    switch (mode) { 

  • sasmodels/models/capped_cylinder.py

    r0507e09 ra34b811  
    146146source = ["lib/polevl.c", "lib/sas_J1.c", "lib/gauss76.c", "capped_cylinder.c"] 
    147147have_Fq = True 
    148 effective_radius_type = [ 
     148radius_effective_modes = [ 
    149149    "equivalent cylinder excluded volume", "equivalent volume sphere", 
    150150    "radius", "half length", "half total length", 

  • sasmodels/models/core_multi_shell.c

    rd42dd4a ra34b811  
    2626 
    2727static double 
    28 effective_radius(int mode, double core_radius, double fp_n, double thickness[]) 
     28radius_effective(int mode, double core_radius, double fp_n, double thickness[]) 
    2929{ 
    3030  switch (mode) { 

  • sasmodels/models/core_multi_shell.py

    r0507e09 ra34b811  
    108108source = ["lib/sas_3j1x_x.c", "core_multi_shell.c"] 
    109109have_Fq = True 
    110 effective_radius_type = ["outer radius", "core radius"] 
     110radius_effective_modes = ["outer radius", "core radius"] 
    111111 
    112112def random(): 

  • sasmodels/models/core_shell_bicelle.c

    r99658f6 ra34b811  
    6060 
    6161static double 
    62 effective_radius(int mode, double radius, double thick_rim, double thick_face, double length) 
     62radius_effective(int mode, double radius, double thick_rim, double thick_face, double length) 
    6363{ 
    6464    switch (mode) { 

  • sasmodels/models/core_shell_bicelle.py

    r0507e09 ra34b811  
    165165          "core_shell_bicelle.c"] 
    166166have_Fq = True 
    167 effective_radius_type = [ 
     167radius_effective_modes = [ 
    168168    "excluded volume", "equivalent volume sphere", "outer rim radius", 
    169169    "half outer thickness", "half diagonal", 

  • sasmodels/models/core_shell_bicelle_elliptical.c

    r99658f6 ra34b811  
    3535 
    3636static double 
    37 effective_radius(int mode, double r_minor, double x_core, double thick_rim, double thick_face, double length) 
     37radius_effective(int mode, double r_minor, double x_core, double thick_rim, double thick_face, double length) 
    3838{ 
    3939    switch (mode) { 

  • sasmodels/models/core_shell_bicelle_elliptical.py

    r0507e09 ra34b811  
    155155          "core_shell_bicelle_elliptical.c"] 
    156156have_Fq = True 
    157 effective_radius_type = [ 
     157radius_effective_modes = [ 
    158158    "equivalent cylinder excluded volume", "equivalent volume sphere", 
    159159    "outer rim average radius", "outer rim min radius", 

  • sasmodels/models/core_shell_bicelle_elliptical_belt_rough.c

    r99658f6 ra34b811  
    3636 
    3737static double 
    38 effective_radius(int mode, double r_minor, double x_core, double thick_rim, double thick_face, double length) 
     38radius_effective(int mode, double r_minor, double x_core, double thick_rim, double thick_face, double length) 
    3939{ 
    4040    switch (mode) { 

  • sasmodels/models/core_shell_bicelle_elliptical_belt_rough.py

    r0507e09 ra34b811  
    168168          "core_shell_bicelle_elliptical_belt_rough.c"] 
    169169have_Fq = True 
    170 effective_radius_type = [ 
     170radius_effective_modes = [ 
    171171    "equivalent cylinder excluded volume", "equivalent volume sphere", 
    172172    "outer rim average radius", "outer rim min radius", 

  • sasmodels/models/core_shell_cylinder.c

    r99658f6 ra34b811  
    3737 
    3838static double 
    39 effective_radius(int mode, double radius, double thickness, double length) 
     39radius_effective(int mode, double radius, double thickness, double length) 
    4040{ 
    4141    switch (mode) { 

  • sasmodels/models/core_shell_cylinder.py

    r0507e09 ra34b811  
    141141source = ["lib/polevl.c", "lib/sas_J1.c", "lib/gauss76.c", "core_shell_cylinder.c"] 
    142142have_Fq = True 
    143 effective_radius_type = [ 
     143radius_effective_modes = [ 
    144144    "excluded volume", "equivalent volume sphere", "outer radius", "half outer length", 
    145145    "half min outer dimension", "half max outer dimension", "half outer diagonal", 

  • sasmodels/models/core_shell_ellipsoid.c

    r99658f6 ra34b811  
    6868 
    6969static double 
    70 effective_radius(int mode, double radius_equat_core, double x_core, double thick_shell, double x_polar_shell) 
     70radius_effective(int mode, double radius_equat_core, double x_core, double thick_shell, double x_polar_shell) 
    7171{ 
    7272    const double radius_equat_tot = radius_equat_core + thick_shell; 

  • sasmodels/models/core_shell_ellipsoid.py

    r0507e09 ra34b811  
    155155source = ["lib/sas_3j1x_x.c", "lib/gauss76.c", "core_shell_ellipsoid.c"] 
    156156have_Fq = True 
    157 effective_radius_type = [ 
     157radius_effective_modes = [ 
    158158    "average outer curvature", "equivalent volume sphere", 
    159159    "min outer radius", "max outer radius", 

  • sasmodels/models/core_shell_parallelepiped.c

    r99658f6 ra34b811  
    7575 
    7676static double 
    77 effective_radius(int mode, double length_a, double length_b, double length_c, 
     77radius_effective(int mode, double length_a, double length_b, double length_c, 
    7878                 double thick_rim_a, double thick_rim_b, double thick_rim_c) 
    7979{ 

  • sasmodels/models/core_shell_parallelepiped.py

    r0507e09 ra34b811  
    236236source = ["lib/gauss76.c", "core_shell_parallelepiped.c"] 
    237237have_Fq = True 
    238 effective_radius_type = [ 
     238radius_effective_modes = [ 
    239239    "equivalent cylinder excluded volume", 
    240240    "equivalent volume sphere", 

  • sasmodels/models/core_shell_sphere.c

    rd42dd4a ra34b811  
    66 
    77static double 
    8 effective_radius(int mode, double radius, double thickness) 
     8radius_effective(int mode, double radius, double thickness) 
    99{ 
    1010    switch (mode) { 

  • sasmodels/models/core_shell_sphere.py

    r0507e09 ra34b811  
    6060---------------------------- 
    6161 
    62 * **Author:**  
    63 * **Last Modified by:**  
    64 * **Last Reviewed by:**  
     62* **Author:** 
     63* **Last Modified by:** 
     64* **Last Reviewed by:** 
    6565* **Source added by :** Steve King **Date:** March 25, 2019 
    6666""" 
    … …  
    9292source = ["lib/sas_3j1x_x.c", "lib/core_shell.c", "core_shell_sphere.c"] 
    9393have_Fq = True 
    94 effective_radius_type = ["outer radius", "core radius"] 
     94radius_effective_modes = ["outer radius", "core radius"] 
    9595 
    9696demo = dict(scale=1, background=0, radius=60, thickness=10, 

  • sasmodels/models/cylinder.c

    r99658f6 ra34b811  
    3232 
    3333static double 
    34 effective_radius(int mode, double radius, double length) 
     34radius_effective(int mode, double radius, double length) 
    3535{ 
    3636    switch (mode) { 

  • sasmodels/models/cylinder.py

    r6652522 ra34b811  
    155155source = ["lib/polevl.c", "lib/sas_J1.c", "lib/gauss76.c", "cylinder.c"] 
    156156have_Fq = True 
    157 effective_radius_type = [ 
     157radius_effective_modes = [ 
    158158    "excluded volume", "equivalent volume sphere", "radius", 
    159159    "half length", "half min dimension", "half max dimension", "half diagonal", 

  • sasmodels/models/ellipsoid.c

    r99658f6 ra34b811  
    3232 
    3333static double 
    34 effective_radius(int mode, double radius_polar, double radius_equatorial) 
     34radius_effective(int mode, double radius_polar, double radius_equatorial) 
    3535{ 
    3636    switch (mode) { 

  • sasmodels/models/ellipsoid.py

    r0507e09 ra34b811  
    167167source = ["lib/sas_3j1x_x.c", "lib/gauss76.c", "ellipsoid.c"] 
    168168have_Fq = True 
    169 effective_radius_type = [ 
     169radius_effective_modes = [ 
    170170    "average curvature", "equivalent volume sphere", "min radius", "max radius", 
    171171    ] 

  • sasmodels/models/elliptical_cylinder.c

    r99658f6 ra34b811  
    4141 
    4242static double 
    43 effective_radius(int mode, double radius_minor, double r_ratio, double length) 
     43radius_effective(int mode, double radius_minor, double r_ratio, double length) 
    4444{ 
    4545    switch (mode) { 

  • sasmodels/models/elliptical_cylinder.py

    r0507e09 ra34b811  
    131131source = ["lib/polevl.c", "lib/sas_J1.c", "lib/gauss76.c", "elliptical_cylinder.c"] 
    132132have_Fq = True 
    133 effective_radius_type = [ 
     133radius_effective_modes = [ 
    134134    "equivalent cylinder excluded volume", 
    135135    "equivalent volume sphere", "average radius", "min radius", "max radius", 

  • sasmodels/models/fuzzy_sphere.c

    rd42dd4a ra34b811  
    55 
    66static double 
    7 effective_radius(int mode, double radius, double fuzziness) 
     7radius_effective(int mode, double radius, double fuzziness) 
    88{ 
    99    switch (mode) { 

  • sasmodels/models/fuzzy_sphere.py

    r0507e09 ra34b811  
    6363---------------------------- 
    6464 
    65 * **Author:**  
    66 * **Last Modified by:**  
    67 * **Last Reviewed by:**  
     65* **Author:** 
     66* **Last Modified by:** 
     67* **Last Reviewed by:** 
    6868* **Source added by :** Steve King **Date:** March 25, 2019 
    6969""" 
    … …  
    9898source = ["lib/sas_3j1x_x.c", "fuzzy_sphere.c"] 
    9999have_Fq = True 
    100 effective_radius_type = ["radius", "radius + fuzziness"] 
     100radius_effective_modes = ["radius", "radius + fuzziness"] 
    101101 
    102102def random(): 

  • sasmodels/models/hollow_cylinder.c

    r99658f6 ra34b811  
    3434 
    3535static double 
    36 effective_radius(int mode, double radius, double thickness, double length) 
     36radius_effective(int mode, double radius, double thickness, double length) 
    3737{ 
    3838    switch (mode) { 

  • sasmodels/models/hollow_cylinder.py

    r0507e09 ra34b811  
    110110source = ["lib/polevl.c", "lib/sas_J1.c", "lib/gauss76.c", "hollow_cylinder.c"] 
    111111have_Fq = True 
    112 effective_radius_type = [ 
     112radius_effective_modes = [ 
    113113    "excluded volume", "equivalent outer volume sphere", 
    114114    "outer radius", "half length", 

  • sasmodels/models/hollow_rectangular_prism.c

    r99658f6 ra34b811  
    3030 
    3131static double 
    32 effective_radius(int mode, double length_a, double b2a_ratio, double c2a_ratio, double thickness) 
     32radius_effective(int mode, double length_a, double b2a_ratio, double c2a_ratio, double thickness) 
    3333// NOTE length_a is external dimension! 
    3434{ 

  • sasmodels/models/hollow_rectangular_prism.py

    r0507e09 ra34b811  
    157157source = ["lib/gauss76.c", "hollow_rectangular_prism.c"] 
    158158have_Fq = True 
    159 effective_radius_type = [ 
     159radius_effective_modes = [ 
    160160    "equivalent cylinder excluded volume", "equivalent outer volume sphere", 
    161161    "half length_a", "half length_b", "half length_c", 

  • sasmodels/models/hollow_rectangular_prism_thin_walls.c

    r99658f6 ra34b811  
    2626 
    2727static double 
    28 effective_radius(int mode, double length_a, double b2a_ratio, double c2a_ratio) 
     28radius_effective(int mode, double length_a, double b2a_ratio, double c2a_ratio) 
    2929{ 
    3030    switch (mode) { 

  • sasmodels/models/hollow_rectangular_prism_thin_walls.py

    r0507e09 ra34b811  
    117117source = ["lib/gauss76.c", "hollow_rectangular_prism_thin_walls.c"] 
    118118have_Fq = True 
    119 effective_radius_type = [ 
     119radius_effective_modes = [ 
    120120    "equivalent cylinder excluded volume", "equivalent outer volume sphere", 
    121121    "half length_a", "half length_b", "half length_c", 

  • sasmodels/models/mono_gauss_coil.c

    r153f8f6 ra34b811  
    66 
    77static double 
    8 effective_radius(int mode, double rg) 
     8radius_effective(int mode, double rg) 
    99{ 
    1010    switch (mode) { 

  • sasmodels/models/mono_gauss_coil.py

    r0507e09 ra34b811  
    5959---------------------------- 
    6060 
    61 * **Author:**  
    62 * **Last Modified by:**  
    63 * **Last Reviewed by:**  
     61* **Author:** 
     62* **Last Modified by:** 
     63* **Last Reviewed by:** 
    6464* **Source added by :** Steve King **Date:** March 25, 2019""" 
    6565 
    … …  
    8686source = ["mono_gauss_coil.c"] 
    8787have_Fq = False 
    88 effective_radius_type = ["R_g", "2R_g", "3R_g", "sqrt(5/3)*R_g"] 
     88radius_effective_modes = ["R_g", "2R_g", "3R_g", "sqrt(5/3)*R_g"] 
    8989 
    9090 

  • sasmodels/models/multilayer_vesicle.c

    ree60aa7 ra34b811  
    4848 
    4949static double 
    50 effective_radius(int mode, double radius, double thick_shell, double thick_solvent, double fp_n_shells) 
     50radius_effective(int mode, double radius, double thick_shell, double thick_solvent, double fp_n_shells) 
    5151{ 
    5252    // case 1: outer radius 

  • sasmodels/models/multilayer_vesicle.py

    r0507e09 ra34b811  
    154154source = ["lib/sas_3j1x_x.c", "multilayer_vesicle.c"] 
    155155have_Fq = True 
    156 effective_radius_type = ["outer radius"] 
     156radius_effective_modes = ["outer radius"] 
    157157 
    158158def random(): 

  • sasmodels/models/onion.c

    ree60aa7 ra34b811  
    4747 
    4848static double 
    49 effective_radius(int mode, double radius_core, double n_shells, double thickness[]) 
     49radius_effective(int mode, double radius_core, double n_shells, double thickness[]) 
    5050{ 
    5151  // case 1: outer radius 

  • sasmodels/models/onion.py

    r0507e09 ra34b811  
    182182---------------------------- 
    183183 
    184 * **Author:**  
    185 * **Last Modified by:**  
    186 * **Last Reviewed by:**  
     184* **Author:** 
     185* **Last Modified by:** 
     186* **Last Reviewed by:** 
    187187* **Source added by :** Steve King **Date:** March 25, 2019 
    188188""" 
    … …  
    329329single = False 
    330330have_Fq = True 
    331 effective_radius_type = ["outer radius"] 
     331radius_effective_modes = ["outer radius"] 
    332332 
    333333profile_axes = ['Radius (A)', 'SLD (1e-6/A^2)'] 

  • sasmodels/models/parallelepiped.c

    r99658f6 ra34b811  
    3737 
    3838static double 
    39 effective_radius(int mode, double length_a, double length_b, double length_c) 
     39radius_effective(int mode, double length_a, double length_b, double length_c) 
    4040{ 
    4141    switch (mode) { 

  • sasmodels/models/parallelepiped.py

    r0507e09 ra34b811  
    240240source = ["lib/gauss76.c", "parallelepiped.c"] 
    241241have_Fq = True 
    242 effective_radius_type = [ 
     242radius_effective_modes = [ 
    243243    "equivalent cylinder excluded volume", "equivalent volume sphere", 
    244244    "half length_a", "half length_b", "half length_c", 

  • sasmodels/models/pearl_necklace.c

    r9b5fd42 ra34b811  
    8686 
    8787static double 
    88 effective_radius(int mode, double radius, double edge_sep, double thick_string, double fp_num_pearls) 
     88radius_effective(int mode, double radius, double edge_sep, double thick_string, double fp_num_pearls) 
    8989{ 
    9090    switch (mode) { 

  • sasmodels/models/pearl_necklace.py

    r0507e09 ra34b811  
    6565---------------------------- 
    6666 
    67 * **Author:**  
    68 * **Last Modified by:**  
    69 * **Last Reviewed by:**  
     67* **Author:** 
     68* **Last Modified by:** 
     69* **Last Reviewed by:** 
    7070* **Source added by :** Steve King **Date:** March 25, 2019 
    7171""" 
    … …  
    111111source = ["lib/sas_Si.c", "lib/sas_3j1x_x.c", "pearl_necklace.c"] 
    112112single = False  # use double precision unless told otherwise 
    113 effective_radius_type = ["equivalent volume sphere"] 
     113radius_effective_modes = ["equivalent volume sphere"] 
    114114 
    115115def random(): 

  • sasmodels/models/poly_gauss_coil.py

    r0507e09 ra34b811  
    5858---------------------------- 
    5959 
    60 * **Author:**  
    61 * **Last Modified by:**  
    62 * **Last Reviewed by:**  
     60* **Author:** 
     61* **Last Modified by:** 
     62* **Last Reviewed by:** 
    6363* **Source added by :** Steve King **Date:** March 25, 2019 
    6464""" 

  • sasmodels/models/pringle.c

    r99658f6 ra34b811  
    111111 
    112112static double 
    113 effective_radius(int mode, double radius, double thickness, double alpha, double beta) 
     113radius_effective(int mode, double radius, double thickness, double alpha, double beta) 
    114114{ 
    115115    switch (mode) { 

  • sasmodels/models/pringle.py

    r0507e09 ra34b811  
    8585source = ["lib/polevl.c", "lib/sas_J0.c", "lib/sas_J1.c", 
    8686          "lib/sas_JN.c", "lib/gauss76.c", "pringle.c"] 
    87 effective_radius_type = [ 
     87radius_effective_modes = [ 
    8888    "equivalent cylinder excluded volume", 
    8989    "equivalent volume sphere", 

  • sasmodels/models/raspberry.c

    rd42dd4a ra34b811  
    1515 
    1616static double 
    17 effective_radius(int mode, double radius_lg, double radius_sm, double penetration) 
     17radius_effective(int mode, double radius_lg, double radius_sm, double penetration) 
    1818{ 
    1919    switch (mode) { 

  • sasmodels/models/raspberry.py

    r0507e09 ra34b811  
    161161 
    162162source = ["lib/sas_3j1x_x.c", "raspberry.c"] 
    163 effective_radius_type = ["radius_large", "radius_outer"] 
     163radius_effective_modes = ["radius_large", "radius_outer"] 
    164164 
    165165def random(): 

  • sasmodels/models/rectangular_prism.c

    r99658f6 ra34b811  
    1414 
    1515static double 
    16 effective_radius(int mode, double length_a, double b2a_ratio, double c2a_ratio) 
     16radius_effective(int mode, double length_a, double b2a_ratio, double c2a_ratio) 
    1717{ 
    1818    switch (mode) { 

  • sasmodels/models/rectangular_prism.py

    r0507e09 ra34b811  
    110110---------------------------- 
    111111 
    112 * **Author:**  
    113 * **Last Modified by:**  
    114 * **Last Reviewed by:**  
     112* **Author:** 
     113* **Last Modified by:** 
     114* **Last Reviewed by:** 
    115115* **Source added by :** Steve King **Date:** March 25, 2019 
    116116""" 
    … …  
    151151source = ["lib/gauss76.c", "rectangular_prism.c"] 
    152152have_Fq = True 
    153 effective_radius_type = [ 
     153radius_effective_modes = [ 
    154154    "equivalent cylinder excluded volume", "equivalent volume sphere", 
    155155    "half length_a", "half length_b", "half length_c", 

  • sasmodels/models/sphere.c

    ree60aa7 ra34b811  
    55 
    66static double 
    7 effective_radius(int mode, double radius) 
     7radius_effective(int mode, double radius) 
    88{ 
    99    // case 1: radius 

  • sasmodels/models/sphere.py

    r6140894 ra34b811  
    8181source = ["lib/sas_3j1x_x.c", "sphere.c"] 
    8282have_Fq = True 
    83 effective_radius_type = ["radius"] 
     83radius_effective_modes = ["radius"] 
    8484 
    8585def random(): 
    … …  
    9999      0.2, 792.0646662454202, 1166737.0473152, 120.0, 7246723.820358589, 1.0], # the longer list here checks  F1, F2, R_eff, volume, volume_ratio = call_Fq(kernel, pars) 
    100100   #  But note P(Q) = F2/volume 
    101    #  F and F^2 are "unscaled", with for  n <F F*>S(q) or for beta approx I(q) = n [<F F*> + <F><F*> (S(q) - 1)]  
    102    #  for n the number density and <.> the orientation average, and F = integral rho(r) exp(i q . r) dr.   
    103    #  The number density is volume fraction divided by particle volume.   
     101   #  F and F^2 are "unscaled", with for  n <F F*>S(q) or for beta approx I(q) = n [<F F*> + <F><F*> (S(q) - 1)] 
     102   #  for n the number density and <.> the orientation average, and F = integral rho(r) exp(i q . r) dr. 
     103   #  The number density is volume fraction divided by particle volume. 
    104104   #  Effectively, this leaves F = V drho form, where form is the usual 3 j1(qr)/(qr) or whatever depending on the shape. 
    105105   # [{"@S": "hardsphere"}, 
    … …  
    124124     "structure_factor_mode": 1,  # 0 = normal decoupling approximation, 1 = beta(Q) approx 
    125125     "radius_effective_mode": 0   # this used r_eff =0 or default 50? 
    126      }, 0.01, 1324.7375636587356 ],    
     126     }, 0.01, 1324.7375636587356 ], 
    127127    [{"@S": "hardsphere", 
    128128     "radius": 120., "radius_pd": 0.2, "radius_pd_n":45, 
    … …  
    131131     "structure_factor_mode": 1,  # 0 = normal decoupling approximation, 1 = beta(Q) approx 
    132132     "radius_effective_mode": 1   # this used 120 ??? 
    133      }, 0.01, 1579.2858949296565 ]    
     133     }, 0.01, 1579.2858949296565 ] 
    134134] 
    135135# putting None for expected result will pass the test if there are no errors from the routine, but without any check on the value of the result 

  • sasmodels/models/spherical_sld.c

    ree60aa7 ra34b811  
    1919 
    2020static double 
    21 effective_radius(int mode, double fp_n_shells, double thickness[], double interface[]) 
     21radius_effective(int mode, double fp_n_shells, double thickness[], double interface[]) 
    2222{ 
    2323    // case 1: outer radius 

  • sasmodels/models/spherical_sld.py

    r0507e09 ra34b811  
    232232single = False  # TODO: fix low q behaviour 
    233233have_Fq = True 
    234 effective_radius_type = ["outer radius"] 
     234radius_effective_modes = ["outer radius"] 
    235235 
    236236profile_axes = ['Radius (A)', 'SLD (1e-6/A^2)'] 

  • sasmodels/models/triaxial_ellipsoid.c

    r99658f6 ra34b811  
    7676 
    7777static double 
    78 effective_radius(int mode, double radius_equat_minor, double radius_equat_major, double radius_polar) 
     78radius_effective(int mode, double radius_equat_minor, double radius_equat_major, double radius_polar) 
    7979{ 
    8080    switch (mode) { 

  • sasmodels/models/triaxial_ellipsoid.py

    r0507e09 ra34b811  
    164164source = ["lib/sas_3j1x_x.c", "lib/gauss76.c", "triaxial_ellipsoid.c"] 
    165165have_Fq = True 
    166 effective_radius_type = [ 
     166radius_effective_modes = [ 
    167167    "equivalent biaxial ellipsoid average curvature", 
    168168    "equivalent volume sphere", "min radius", "max radius", 

  • sasmodels/models/vesicle.c

    r12f4c19 ra34b811  
    1313 
    1414static double 
    15 effective_radius(int mode, double radius, double thickness) 
     15radius_effective(int mode, double radius, double thickness) 
    1616{ 
    1717    // case 1: outer radius 

  • sasmodels/models/vesicle.py

    r0507e09 ra34b811  
    107107source = ["lib/sas_3j1x_x.c", "vesicle.c"] 
    108108have_Fq = True 
    109 effective_radius_type = ["outer radius"] 
     109radius_effective_modes = ["outer radius"] 
    110110 
    111111def random(): 
Note: See TracChangeset for help on using the changeset viewer.