Changeset 9c0f3c17 in sasview for src/sas/sasgui/perspectives/fitting/basepage.py

Timestamp:

Apr 4, 2017 12:50:04 PM (8 years ago)

Author:

Ricardo Ferraz Leal <ricleal@…>

Branches:

master, ESS_GUI, ESS_GUI_Docs, ESS_GUI_batch_fitting, ESS_GUI_bumps_abstraction, ESS_GUI_iss1116, ESS_GUI_iss879, ESS_GUI_iss959, ESS_GUI_opencl, ESS_GUI_ordering, ESS_GUI_sync_sascalc, costrafo411, magnetic_scatt, release-4.2.2, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, ticket885, unittest-saveload

Children:

f2940c4

Parents:

463e7ffc (diff), 1779e72 (diff)
Note: this is a merge changeset, the changes displayed below correspond to the merge itself.
Use the (diff) links above to see all the changes relative to each parent.

Message:

After merge conflict

File:

• src/sas/sasgui/perspectives/fitting/basepage.py (modified) (15 diffs)

src/sas/sasgui/perspectives/fitting/basepage.py

@@ -5 +5 @@
 import os
 import wx
-import numpy
+import numpy as np
 import time
 import copy
@@ -101 +101 @@
         self.graph_id = None
         # Q range for data set
-        self.qmin_data_set = numpy.inf
+        self.qmin_data_set = np.inf
         self.qmax_data_set = None
         self.npts_data_set = 0
@@ -279 +279 @@
 
         """
-        x = numpy.linspace(start=self.qmin_x, stop=self.qmax_x,
+        x = np.linspace(start=self.qmin_x, stop=self.qmax_x,
                            num=self.npts_x, endpoint=True)
         self.data = Data1D(x=x)
@@ -296 +296 @@
         """
         if self.qmin_x >= 1.e-10:
-            qmin = numpy.log10(self.qmin_x)
+            qmin = np.log10(self.qmin_x)
         else:
             qmin = -10.
 
         if self.qmax_x <= 1.e10:
-            qmax = numpy.log10(self.qmax_x)
+            qmax = np.log10(self.qmax_x)
         else:
             qmax = 10.
 
-        x = numpy.logspace(start=qmin, stop=qmax,
+        x = np.logspace(start=qmin, stop=qmax,
                            num=self.npts_x, endpoint=True, base=10.0)
         self.data = Data1D(x=x)
@@ -342 +342 @@
         qstep = self.npts_x
 
-        x = numpy.linspace(start=xmin, stop=xmax, num=qstep, endpoint=True)
-        y = numpy.linspace(start=ymin, stop=ymax, num=qstep, endpoint=True)
+        x = np.linspace(start=xmin, stop=xmax, num=qstep, endpoint=True)
+        y = np.linspace(start=ymin, stop=ymax, num=qstep, endpoint=True)
         # use data info instead
-        new_x = numpy.tile(x, (len(y), 1))
-        new_y = numpy.tile(y, (len(x), 1))
+        new_x = np.tile(x, (len(y), 1))
+        new_y = np.tile(y, (len(x), 1))
         new_y = new_y.swapaxes(0, 1)
         # all data reuire now in 1d array
         qx_data = new_x.flatten()
         qy_data = new_y.flatten()
-        q_data = numpy.sqrt(qx_data * qx_data + qy_data * qy_data)
+        q_data = np.sqrt(qx_data * qx_data + qy_data * qy_data)
         # set all True (standing for unmasked) as default
-        mask = numpy.ones(len(qx_data), dtype=bool)
+        mask = np.ones(len(qx_data), dtype=bool)
         # store x and y bin centers in q space
         x_bins = x
@@ -359 +359 @@
 
         self.data.source = Source()
-        self.data.data = numpy.ones(len(mask))
-        self.data.err_data = numpy.ones(len(mask))
+        self.data.data = np.ones(len(mask))
+        self.data.err_data = np.ones(len(mask))
         self.data.qx_data = qx_data
         self.data.qy_data = qy_data
@@ -784 +784 @@
                     # Skip non-data lines
                     logger.error(traceback.format_exc())
-            return numpy.array(angles), numpy.array(weights)
+            return np.array(angles), np.array(weights)
         except:
             raise
@@ -1450 +1450 @@
                 self.state_change = True
                 self._draw_model()
-                # Time delay has been introduced to prevent _handle error
-                # on Windows
-                # This part of code is executed when model is selected and
-                # it's parameters are changed (with respect to previously
-                # selected model). There are two Iq evaluations occuring one
-                # after another and therefore there may be compilation error
-                # if model is calculated for the first time.
-                # This seems to be Windows only issue - haven't tested on Linux
-                # though.The proper solution (other than time delay) requires
-                # more fundemental code refatoring
-                # Wojtek P. Nov 7, 2016
-                if not ON_MAC:
-                    time.sleep(0.1)
                 self.Refresh()
 
@@ -2121 +2108 @@
         for data in self.data_list:
             # q value from qx and qy
-            radius = numpy.sqrt(data.qx_data * data.qx_data +
+            radius = np.sqrt(data.qx_data * data.qx_data +
                                 data.qy_data * data.qy_data)
             # get unmasked index
@@ -2127 +2114 @@
                          (radius <= float(self.qmax.GetValue()))
             index_data = (index_data) & (data.mask)
-            index_data = (index_data) & (numpy.isfinite(data.data))
+            index_data = (index_data) & (np.isfinite(data.data))
 
             if len(index_data[index_data]) < 10:
@@ -2162 +2149 @@
             index_data = (float(self.qmin.GetValue()) <= radius) & \
                          (radius <= float(self.qmax.GetValue()))
-            index_data = (index_data) & (numpy.isfinite(data.y))
+            index_data = (index_data) & (np.isfinite(data.y))
 
             if len(index_data[index_data]) < 5:
@@ -2234 +2221 @@
 
                 # Check that min is less than max
-                low = -numpy.inf if min_str == "" else float(min_str)
-                high = numpy.inf if max_str == "" else float(max_str)
+                low = -np.inf if min_str == "" else float(min_str)
+                high = np.inf if max_str == "" else float(max_str)
                 if high < low:
                     min_ctrl.SetBackgroundColour("pink")
@@ -2610 +2597 @@
             Layout is called after fitting.
         """
-        self._sleep4sec()
         self.Layout()
         return
-
-    def _sleep4sec(self):
-        """
-            sleep for 1 sec only applied on Mac
-            Note: This 1sec helps for Mac not to crash on self.
-            Layout after self._draw_model
-        """
-        if ON_MAC:
-            time.sleep(1)
 
     def _find_polyfunc_selection(self, disp_func=None):
@@ -2655 +2632 @@
             self.qmin_x = data_min
             self.qmax_x = math.sqrt(x * x + y * y)
-            # self.data.mask = numpy.ones(len(self.data.data),dtype=bool)
+            # self.data.mask = np.ones(len(self.data.data),dtype=bool)
             # check smearing
             if not self.disable_smearer.GetValue():
@@ -3367 +3344 @@
 
             if value[1] == 'array':
-                pd_vals = numpy.array(value[2])
-                pd_weights = numpy.array(value[3])
+                pd_vals = np.array(value[2])
+                pd_weights = np.array(value[3])
                 if len(pd_vals) == 0 or len(pd_vals) != len(pd_weights):
                     msg = ("bad array distribution parameters for %s"