Ignore:
Timestamp:
Jun 3, 2018 6:33:35 AM (6 years ago)
Author:
GitHub <noreply@…>
Branches:
master, magnetic_scatt, release-4.2.2, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, unittest-saveload
Children:
316b9c1
Parents:
de43192 (diff), 8b89396 (diff)
Note: this is a merge changeset, the changes displayed below correspond to the merge itself.
Use the (diff) links above to see all the changes relative to each parent.
git-author:
Paul Butler <butlerpd@…> (06/03/18 06:33:35)
git-committer:
GitHub <noreply@…> (06/03/18 06:33:35)
Message:

Merge pull request #151 from SasView?/ticket885b

Ticket885b

This reverts to no polydisperse parameters — ticket #885 needs to be updated to be a feature request adding polydispersity … correctly this time.

Location:
src/sas/sasgui/perspectives/calculator
Files:
2 edited

Legend:

Unmodified
Added
Removed
  • src/sas/sasgui/perspectives/calculator/model_editor.py

    rc6dfb9f r9258c43c  
    663663        Do the layout for parameter related widgets 
    664664        """ 
    665         param_txt = wx.StaticText(self, -1, 'Fit Parameters NOT requiring' + \ 
    666                                   ' polydispersity (if any): ') 
    667  
    668         param_tip = "#Set the parameters NOT requiring polydispersity " + \ 
    669         "and their initial values.\n" 
     665        param_txt = wx.StaticText(self, -1, 'Fit Parameters: ') 
     666 
     667        param_tip = "#Set the parameters and their initial values.\n" 
    670668        param_tip += "#Example:\n" 
    671669        param_tip += "A = 1\nB = 1" 
     
    681679                                  (self.param_tcl, 1, wx.EXPAND | wx.ALL, 10)]) 
    682680 
    683         # Parameters with polydispersity 
    684         pd_param_txt = wx.StaticText(self, -1, 'Fit Parameters requiring ' + \ 
    685                                      'polydispersity (if any): ') 
    686  
    687         pd_param_tip = "#Set the parameters requiring polydispersity and " + \ 
    688         "their initial values.\n" 
    689         pd_param_tip += "#Example:\n" 
    690         pd_param_tip += "C = 2\nD = 2" 
    691         newid = wx.NewId() 
    692         self.pd_param_tcl = EditWindow(self, newid, wx.DefaultPosition, 
    693                                     wx.DefaultSize, 
    694                                     wx.CLIP_CHILDREN | wx.SUNKEN_BORDER) 
    695         self.pd_param_tcl.setDisplayLineNumbers(True) 
    696         self.pd_param_tcl.SetToolTipString(pd_param_tip) 
    697  
    698         self.param_sizer.AddMany([(pd_param_txt, 0, wx.LEFT, 10), 
    699                                   (self.pd_param_tcl, 1, wx.EXPAND | wx.ALL, 10)]) 
    700681 
    701682    def _layout_function(self): 
     
    899880            description = self.desc_tcl.GetValue() 
    900881            param_str = self.param_tcl.GetText() 
    901             pd_param_str = self.pd_param_tcl.GetText() 
    902882            func_str = self.function_tcl.GetText() 
    903883            # No input for the model function 
     
    905885                if func_str.count('return') > 0: 
    906886                    self.write_file(self.fname, name, description, param_str, 
    907                                     pd_param_str, func_str) 
     887                                    func_str) 
    908888                    try: 
    909889                        result, msg = check_model(self.fname), None 
     
    945925        self.warning = msg 
    946926 
    947     def write_file(self, fname, name, desc_str, param_str, pd_param_str, func_str): 
     927    def write_file(self, fname, name, desc_str, param_str, func_str): 
    948928        """ 
    949929        Write content in file 
     
    952932        :param desc_str: content of the description strings 
    953933        :param param_str: content of params; Strings 
    954         :param pd_param_str: content of params requiring polydispersity; Strings 
    955934        :param func_str: content of func; Strings 
    956935        """ 
     
    966945        # Write out parameters 
    967946        param_names = []    # to store parameter names 
    968         pd_params = [] 
    969947        out_f.write('parameters = [ \n') 
    970948        out_f.write('#   ["name", "units", default, [lower, upper], "type", "description"],\n') 
     
    973951            out_f.write("    ['%s', '', %s, [-inf, inf], '', '%s'],\n" 
    974952                        % (pname, pvalue, desc)) 
    975         for pname, pvalue, desc in self.get_param_helper(pd_param_str): 
    976             param_names.append(pname) 
    977             pd_params.append(pname) 
    978             out_f.write("    ['%s', '', %s, [-inf, inf], 'volume', '%s'],\n" 
    979                         % (pname, pvalue, desc)) 
    980953        out_f.write('    ]\n') 
    981954 
    982955        # Write out function definition 
     956        out_f.write('\n') 
    983957        out_f.write('def Iq(%s):\n' % ', '.join(['x'] + param_names)) 
    984958        out_f.write('    """Absolute scattering"""\n') 
     
    990964            out_f.write('    import numpy as np') 
    991965        for func_line in func_str.split('\n'): 
    992             out_f.write('%s%s\n' % (spaces4, func_line)) 
     966            out_f.write('%s%s\n' % ('    ', func_line)) 
    993967        out_f.write('## uncomment the following if Iq works for vector x\n') 
    994968        out_f.write('#Iq.vectorized = True\n') 
    995  
    996         # If polydisperse, create place holders for form_volume, ER and VR 
    997         if pd_params: 
    998             out_f.write('\n') 
    999             out_f.write(CUSTOM_TEMPLATE_PD % {'args': ', '.join(pd_params)}) 
    1000969 
    1001970        # Create place holder for Iqxy 
     
    11281097description = """%(description)s""" 
    11291098 
    1130 ''' 
    1131  
    1132 CUSTOM_TEMPLATE_PD = '''\ 
    1133 def form_volume(%(args)s): 
    1134     """ 
    1135     Volume of the particles used to compute absolute scattering intensity 
    1136     and to weight polydisperse parameter contributions. 
    1137     """ 
    1138     return 0.0 
    1139  
    1140 def ER(%(args)s): 
    1141     """ 
    1142     Effective radius of particles to be used when computing structure factors. 
    1143  
    1144     Input parameters are vectors ranging over the mesh of polydispersity values. 
    1145     """ 
    1146     return 0.0 
    1147  
    1148 def VR(%(args)s): 
    1149     """ 
    1150     Volume ratio of particles to be used when computing structure factors. 
    1151  
    1152     Input parameters are vectors ranging over the mesh of polydispersity values. 
    1153     """ 
    1154     return 1.0 
    11551099''' 
    11561100 
  • src/sas/sasgui/perspectives/calculator/resolution_calculator_panel.py

    r7432acb r1cf490b6  
    1818matplotlib.use('WXAgg') 
    1919from matplotlib.backends.backend_wxagg import FigureCanvasWxAgg as FigureCanvas 
    20 from matplotlib.backends.backend_wxagg import NavigationToolbar2Wx as Toolbar 
     20from matplotlib.backends.backend_wxagg import NavigationToolbar2WxAgg as Toolbar 
    2121from matplotlib.backend_bases import FigureManagerBase 
    2222# Wx-Pylab magic for displaying plots within an application's window. 
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