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Timestamp:
May 2, 2017 1:58:01 PM (7 years ago)
Author:
Paul Kienzle <pkienzle@…>
Branches:
master, ESS_GUI, ESS_GUI_Docs, ESS_GUI_batch_fitting, ESS_GUI_bumps_abstraction, ESS_GUI_iss1116, ESS_GUI_iss879, ESS_GUI_iss959, ESS_GUI_opencl, ESS_GUI_ordering, ESS_GUI_sync_sascalc, magnetic_scatt, release-4.2.2, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, ticket885, unittest-saveload
Children:
d66dbcc
Parents:
74d9780 (diff), 658dd57 (diff)
Note: this is a merge changeset, the changes displayed below correspond to the merge itself.
Use the (diff) links above to see all the changes relative to each parent.
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merge with master

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  • src/sas/sasview/test/media/testdata_help.rst

    refe730d r914ba0a  
    77sub-folder in your SasView installation folder. 
    88 
    9 The data sets are organized based on their data structure; 1D data, 2D data,  
    10 SASVIEW saved states, and data in formats that are not yet implemented but  
    11 which are in the works for future versions. 
     9The test data sets are organized based on their data structure: 
    1210 
    13 1D data sets have at least two columns of data with Intensity (assumed  
    14 absolute units) on the Y-axis and Q on the X-axis.  
    15  
    16 2D data sets are data sets that give the deduced intensity for each detector  
    17 pixel. Depending on the file extension, uncertainty and meta data may also be  
    18 available. 
    19  
    20 Saved states are projects and analyses saved by the SasView program. A single  
    21 analysis file contains the data and parameters for a single fit (.fit), p(r)  
    22 inversion (.pr), or invariant calculation (.inv). A project file (.svs) contains  
    23 the results for every active analysis. 
    24  
    25 Some of the available test data is described below. 
     11- *1D data* 
     12- *convertible 1D data files* 
     13- *2D data* 
     14- *coordinate data* 
     15- *image data* 
     16- *SESANS data* 
     17- *save states* 
     18- *upcoming formats* 
    2619 
    2720.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
    2821 
     221D Data 
     23^^^^^^^ 
     241D data sets EITHER have: 
     25 
     26- at least two columns of data with I(Q) (assumed to be in absolute units) on the y-axis and Q on the x-axis. And additional columns of data may carry uncertainty data, resolution data, or other metadata. 
     27 
     28OR: 
     29 
     30- the I(Q) and Q data in separate files *with no other information*. 
     31 
     32Data in the latter format need to be converted to a single file format with the :ref:`File_Converter_Tool` before they can be analysed in SasView. Test files are located in the /convertible_files folder. 
     33 
    29341D Test Data 
    30 ^^^^^^^^^^^^ 
     35............ 
     3633837rear_1D_1.75_16.5 
     37  - Data from a magnetically-oriented surfactant liquid crystal output by the Mantid framework. The data was collected on the SANS2D instrument at ISIS. 
    3138 
     3910wtAOT_Reline_120_reduced / Anton-Paar / saxsess_example 
     40  - Data from Anton-Paar SAXSess instruments saved in Otto Glatter's PDH format. 
     41   
    3242AOT_Microemulsion 
    3343  - Aerosol-OT surfactant stabilised oil-in-water microemulsion data at three  
     
    3545    (surfactant layer). 
    3646  - Suitable for testing simultaneous fitting. 
    37    
     47 
     48APS_DND-CAT 
     49  - ASCII data from the DND-CAT beamline at the APS. 
     50 
    3851hSDS_D2O 
    3952  - h25-sodium dodecyl sulphate solutions at two concentrations: 0.5wt% (just  
     
    4255  - Suitable for testing charged S(Q) models. 
    4356 
    44 P123_D2O 
    45   - Lyotropic liquid crystalline solutions of non-ionic ABA block copolymer  
    46     Pluronic P123 in water at three concentrations: 10wt%, 30wt%, and 40wt%. 
    47   - Suitable for testing paracrystal models. 
     57ISIS_83404 / ISIS_98929 
     58  - Polyamide-6 fibres hydrated in D2O exhibiting a broad lamellar peak from the semi-crystalline nanostructure. 
     59  - This is the *same data* as that in the BSL/OTOKO Z8300* / Z9800* files but in an amalgamated ASCII format! 
     60  - Suitable for testing :ref:`Correlation_Function_Analysis` . 
    4861 
    4962ISIS_Polymer_Blend_TK49 
     
    5164    polymer blend. 
    5265  - Suitable for testing Poly_GaussCoil and RPA10 models. 
    53  
    54 .. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
    55  
    56 2D Test Data 
    57 ^^^^^^^^^^^^ 
    5866 
    5967P123_D2O 
     
    6472.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
    6573 
     74Convertible 1D Data 
     75^^^^^^^^^^^^^^^^^^^ 
     76 
     77APS_X / APS_Y 
     78  - ASCII data output by a reduction software package at the APS. 
     79  - Suitable for testing the :ref:`File_Converter_Tool` . 
     80 
     81FIT2D_I / FIT2D_Q 
     82  - ASCII data output by the FIT2D software package at the ESRF. 
     83  - Suitable for testing the :ref:`File_Converter_Tool` . 
     84 
     85Z8300*.I1D / Z8300*.QAX / Z9800*.I1D / Z9800*.QAX 
     86  - BSL/OTOKO data from polyamide-6 fibres hydrated in D2O exhibiting a broad lamellar peak from the semi-crystalline nanostructure. 
     87  - This is the *same data* as that in ISIS_83404 / ISIS_98929 but in an older separated format! 
     88  - Suitable for testing the :ref:`File_Converter_Tool` . 
     89  - Suitable for testing :ref:`Correlation_Function_Analysis` . 
     90 
     91.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
     92 
     932D Data 
     94^^^^^^^ 
     952D data sets are data sets that give the reduced intensity for each Qx-Qy bin. Depending on the file format, uncertainty data and metadata may also be available. 
     96 
     972D Test Data 
     98............ 
     9933837rear_2D_1.75_16.5 
     100  - Data from a magnetically-oriented surfactant liquid crystal output by the Mantid framework. The data was collected on the SANS2D instrument at ISIS. 
     101 
     102P123_D2O 
     103  - Lyotropic liquid crystalline solutions of non-ionic ABA block copolymer  
     104    Pluronic P123 in water at three concentrations: 10wt%, 30wt%, and 40wt%. 
     105  - Suitable for testing paracrystal models. 
     106 
     107.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
     108 
     109Coordinate Data 
     110^^^^^^^^^^^^^^^ 
     111Coordinate data sets, such as PDB or OMF files, and which describe a specific structure, are designed to be read and viewed in the :ref:`SANS_Calculator_Tool` . 
     112 
     113Coordinate Test Data 
     114.................... 
     115A_Raw_Example-1 
     116  - OMF format data file from a simulation of magnetic spheres. 
     117 
     118diamond 
     119  - PDB format data file for diamond. 
     120 
     121dna 
     122  - PDB format data file for DNA. 
     123 
     124sld_file 
     125  - Example SLD format data file. 
     126 
     127.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
     128 
     129Image Data 
     130^^^^^^^^^^ 
     131Image data sets are designed to be read by the :ref:`Image_Viewer_Tool` . They can be converted into synthetic 2D data. 
     132 
     133Image Test Data 
     134............... 
     135ISIS_98940 
     136  - Polyamide-6 fibres hydrated in D2O exhibiting a broad lamellar peak from the semi-crystalline nanostructure. 
     137  - Data is presented in Windows Bitmap (BMP), GIF, JPEG (JPG), PNG, and TIFF (TIF) formats. 
     138 
     139.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
     140 
     141SESANS Data 
     142^^^^^^^^^^^ 
     143SESANS (Spin-Echo SANS) data sets primarily contain the neutron polarisation as a function of the spin-echo length. Also see :ref:`SESANS` . 
     144 
     145SESANS Test Data 
     146................ 
     147spheres2micron 
     148  - SESANS data from 2 micron polystyrene spheres in 53% H2O / 47% D2O. 
     149 
     150.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
     151 
     152Save States 
     153^^^^^^^^^^^ 
     154Saved states are projects and analyses saved by the SasView program. A single  
     155analysis file contains the data and parameters for a single fit (.fit), p(r)  
     156inversion (.prv), or invariant calculation (.inv). A project file (.svs) contains  
     157the results for every active analysis in a SasView session. 
     158 
    66159Saved State Test Data 
    67 ^^^^^^^^^^^^^^^^^^^^^ 
     160..................... 
     161fitstate.fitv 
     162  - a saved fitting analysis. 
    68163 
    69 _phi_weights.txt 
     164test.inv 
     165  - a saved invariant analysis. 
    70166 
    71 _radius_dist.txt 
     167test002.inv 
     168  - a saved invariant analysis. 
    72169 
    73 _THETA_weights.txt 
    74  
    75 fitstate.fitv 
     170prstate.prv 
     171  - a saved P(r) analysis. 
    76172 
    77173newone.svs 
     174  - a saved SasView project. 
    78175 
    79 prstate.prv 
     176.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
    80177 
    81 sld_file.sld 
    82  
    83 test.inv 
    84  
    85 test002.inv 
     178Upcoming Formats 
     179^^^^^^^^^^^^^^^^ 
     180Data in this folder are in formats that are not yet implemented in SasView but which might be in future versions of the program. 
    86181 
    87182.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
     
    89184Other Test Data 
    90185^^^^^^^^^^^^^^^ 
     186phi_weights.txt 
    91187 
    92 1000A_sphere_sm.xml 
     188radius_dist.txt 
    93189 
    94 diamond.pdb 
    95  
    96 dna.pdb 
     190THETA_weights.txt 
    97191 
    98192.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
    99193 
    100 .. note::  This help document was last changed by Steve King, 26Jun2015 
     194.. note::  This help document was last changed by Steve King, 06Oct2016 
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