Ignore:
Timestamp:
Dec 18, 2012 10:55:24 AM (12 years ago)
Author:
Jae Cho <jhjcho@…>
Branches:
master, ESS_GUI, ESS_GUI_Docs, ESS_GUI_batch_fitting, ESS_GUI_bumps_abstraction, ESS_GUI_iss1116, ESS_GUI_iss879, ESS_GUI_iss959, ESS_GUI_opencl, ESS_GUI_ordering, ESS_GUI_sync_sascalc, costrafo411, magnetic_scatt, release-4.1.1, release-4.1.2, release-4.2.2, release_4.0.1, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, ticket885, unittest-saveload
Children:
6550b64
Parents:
0203ade
Message:

Added polarization and magnetic stuffs

File:
1 edited

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  • sansmodels/src/sans/models/media/pd_help.html

    r17574ae r318b5bbb  
    1 <html> 
    2  
    31<head> 
    42<meta http-equiv=Content-Type content="text/html; charset=windows-1252"> 
     
    2927style='font-family:"Times New Roman","serif"'>The following five distribution 
    3028functions are provided;</span></p> 
    31 <p>&nbsp;</p> 
    3229<ul> 
    3330<li><a href="#Rectangular">Rectangular distribution</a></li> 
     
    3835</ul> 
    3936<p>&nbsp;</p> 
    40 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    41 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     37<p><a name="Rectangular"><h4>Rectangular distribution</a></h4></p> 
     38<p><img src="./img/pd_image001.png"></p> 
     39<p>&nbsp;</p> 
     40<p>The x<sub>mean</sub> is the mean 
     41of the distribution, w is the half-width, and Norm is a normalization factor 
     42which is determined during the numerical calculation. Note that the Sigma and 
     43the half width <i>w</i> are different.</p> 
     44<p>The standard deviation is </p> 
     45<p><img src="./img/pd_image002.png"></p> 
     46<p>&nbsp;</p> 
     47<p>The PD (polydispersity) is </p> 
     48<p><img src="./img/pd_image003.png"></p> 
     49<p>&nbsp;</p> 
     50<p><img width=511 height=270 
     51id="Picture 1" src="./img/pd_image004.jpg" alt=flat.gif></p> 
     52<p>&nbsp;</p> 
     53<p>&nbsp;</p> 
     54<p><a name="Array"><h4>Array distribution</h4></a></p> 
    4255 
    43 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    44 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     56<p>This distribution is to be given 
     57by users as a txt file where the array should be defined by two columns in the 
     58order of x and f(x) values. The f(x) will be normalized by SansView during the 
     59computation.</p> 
    4560 
    46 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    47 style='font-family:"Times New Roman","serif"'><a name="Rectangular"><h4>Rectangular distribution</a></h4></span></p> 
     61<p>Example of an array in the file;</p> 
    4862 
    49 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    50 style='font-family:"Times New Roman","serif";position:relative;top:22.0pt'><img 
    51 width=248 height=67 src="./img/pd_image001.png"></span></p> 
     63<p>30        0.1</p> 
     64 
     65<p>32        0.3</p> 
     66 
     67<p>35        0.4</p> 
     68 
     69<p>36        0.5</p> 
     70 
     71<p>37        0.6</p> 
     72 
     73<p>39        0.7</p> 
     74 
     75<p>41        0.9</p> 
     76 
     77<p'>&nbsp;</p> 
     78 
     79<p>We use only these array values in 
     80the computation, therefore the mean value given in the control panel, for 
     81example ‘radius = 60’, will be ignored.</p> 
     82<p>&nbsp;</p> 
     83 
     84 
     85<p><a name="Gaussian"><h4>Gaussian distribution</h4></a></p> 
     86<p>&nbsp;</p> 
     87 
     88<p><img src="./img/pd_image005.png"></p> 
    5289 
    5390<p>&nbsp;</p> 
    54 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    55 style='font-family:"Times New Roman","serif"'>The x<sub>mean</sub> is the mean 
    56 of the distribution, w is the half-width, and Norm is a normalization factor 
    57 which is determined during the numerical calculation. Note that the Sigma and 
    58 the half width <i>w</i> are different.</span></p> 
    5991 
    60 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    61 style='font-family:"Times New Roman","serif"'>The standard deviation is </span></p> 
     92<p>The x<sub>mean</sub> is the mean 
     93of the distribution and Norm is a normalization factor which is determined 
     94during the numerical calculation.</p> 
    6295 
    63 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    64 style='font-family:"Times New Roman","serif";position:relative;top:4.0pt'><img 
    65 width=72 height=24 src="./img/pd_image002.png"></span><span 
    66 style='font-family:"Times New Roman","serif"'>. </span></p> 
     96<p>&nbsp;</p> 
    6797 
    68 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    69 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     98<p>The PD (polydispersity) is </p> 
    7099 
    71 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    72 style='font-family:"Times New Roman","serif"'>The PD (polydispersity) is </span></p> 
     100<p><img src="./img/pd_image003.png"></p> 
    73101 
    74 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    75 style='font-family:"Times New Roman","serif";position:relative;top:6.0pt'><img 
    76 width=93 height=24 src="./img/pd_image003.png"></span><span 
    77 style='font-family:"Times New Roman","serif"'>.</span></p> 
     102<p>&nbsp;</p> 
    78103 
    79 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    80 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     104<p><img width=518 height=275 
     105id="Picture 2" src="./img/pd_image006.jpg" alt=gauss.gif></p> 
    81106 
    82 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    83 style='font-family:"Times New Roman","serif"'><img width=511 height=270 
    84 id="Picture 1" src="./img/pd_image004.jpg" alt=flat.gif></span></p> 
     107<p>&nbsp;</p> 
    85108 
    86 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    87 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     109<p><a name="Lognormal"><h4>Lognormal distribution</h4></a></p> 
    88110 
    89 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    90 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     111<p>&nbsp;</p> 
    91112 
    92 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    93 style='font-family:"Times New Roman","serif"'><a name="Array"><h4>Array distribution</h4></a></span></p> 
     113<p><img src="./img/pd_image007.png"></p> 
    94114 
    95 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    96 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     115<p>&nbsp;</p> 
    97116 
    98  
    99 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    100 style='font-family:"Times New Roman","serif"'>This distribution is to be given 
    101 by users as a txt file where the array should be defined by two columns in the 
    102 order of x and f(x) values. The f(x) will be normalized by SansView during the 
    103 computation.</span></p> 
    104  
    105 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    106 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    107  
    108 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    109 style='font-family:"Times New Roman","serif"'>Example of an array in the file;</span></p> 
    110  
    111 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    112 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    113  
    114 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    115 style='font-family:"Times New Roman","serif"'>30        0.1</span></p> 
    116  
    117 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    118 style='font-family:"Times New Roman","serif"'>32        0.3</span></p> 
    119  
    120 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    121 style='font-family:"Times New Roman","serif"'>35        0.4</span></p> 
    122  
    123 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    124 style='font-family:"Times New Roman","serif"'>36        0.5</span></p> 
    125  
    126 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    127 style='font-family:"Times New Roman","serif"'>37        0.6</span></p> 
    128  
    129 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    130 style='font-family:"Times New Roman","serif"'>39        0.7</span></p> 
    131  
    132 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    133 style='font-family:"Times New Roman","serif"'>41        0.9</span></p> 
    134  
    135 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    136 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    137  
    138 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    139 style='font-family:"Times New Roman","serif"'>We use only these array values in 
    140 the computation, therefore the mean value given in the control panel, for 
    141 example ‘radius = 60’, will be ignored.</span></p> 
    142  
    143 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    144 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    145  
    146 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    147 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    148  
    149 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    150 style='font-family:"Times New Roman","serif"'><a name="Gaussian"><h4>Gaussian distribution</h4></a></span></p> 
    151  
    152 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    153 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    154  
    155 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    156 style='font-family:"Times New Roman","serif";position:relative;top:12.0pt'><img 
    157 width=212 height=44 src="./img/pd_image005.png"></span></p> 
    158  
    159 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    160 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    161  
    162 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    163 style='font-family:"Times New Roman","serif"'>The x<sub>mean</sub> is the mean 
    164 of the distribution and Norm is a normalization factor which is determined 
    165 during the numerical calculation.</span></p> 
    166  
    167 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    168 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    169  
    170 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    171 style='font-family:"Times New Roman","serif"'>The PD (polydispersity) is </span></p> 
    172  
    173 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    174 style='font-family:"Times New Roman","serif";position:relative;top:6.0pt'><img 
    175 width=93 height=24 src="./img/pd_image003.png"></span><span 
    176 style='font-family:"Times New Roman","serif"'>.</span></p> 
    177  
    178 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    179 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    180  
    181 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    182 style='font-family:"Times New Roman","serif"'><img width=518 height=275 
    183 id="Picture 2" src="./img/pd_image006.jpg" alt=gauss.gif></span></p> 
    184  
    185 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    186 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    187  
    188 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    189 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    190  
    191 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    192 style='font-family:"Times New Roman","serif"'><a name="Lognormal"><h4>Lognormal distribution</h4></a></span></p> 
    193  
    194 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    195 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    196  
    197 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    198 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    199  
    200 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    201 style='font-family:"Times New Roman","serif";position:relative;top:14.0pt'><img 
    202 width=236 height=47 src="./img/pd_image007.png"></span></p> 
    203  
    204 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    205 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    206  
    207 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    208 style='font-family:"Times New Roman","serif"'>The mu = ln(x<sub>med</sub>),  x<sub>med</sub> 
     117<p>The &#956; = ln(x<sub>med</sub>),  x<sub>med</sub> 
    209118is the median value of the distribution, and Norm is a normalization factor 
    210119which will be determined during the numerical calculation. The median value is 
    211120the value given in the size parameter in the control panel, for example, 
    212 “radius = 60”.</span></p> 
     121“radius = 60”.</p> 
    213122 
    214 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    215 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     123<p >&nbsp;</p> 
    216124 
    217 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    218 style='font-family:"Times New Roman","serif"'>The PD (polydispersity) is given 
    219 by sigma,</span></p> 
     125<p>The PD (polydispersity) is given 
     126by &#963;,</p> 
    220127 
    221 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    222 style='font-family:"Times New Roman","serif";position:relative;top:5.0pt'><img 
    223 width=55 height=21 src="./img/pd_image008.png"></span><span 
    224 style='font-family:"Times New Roman","serif"'>.</span></p> 
     128<p><img src="./img/pd_image008.png"></p> 
    225129 
    226 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    227 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     130<p>&nbsp;</p> 
    228131 
    229 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    230 style='font-family:"Times New Roman","serif"'>For the angular distribution,</span></p> 
     132<p>For the angular distribution,</p> 
    231133 
    232 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    233 style='font-family:"Times New Roman","serif";position:relative;top:6.0pt'><img 
    234 width=76 height=24 src="./img/pd_image009.png"></span></p> 
     134<p><img src="./img/pd_image009.png"></p> 
    235135 
    236 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    237 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     136<p>&nbsp;</p> 
    238137 
    239 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    240 style='font-family:"Times New Roman","serif"'>The mean value is given by x<sub>mean</sub> 
    241 =exp(mu+p^2/2).</span></p> 
     138<p>The mean value is given by x<sub>mean</sub> 
     139=exp(&#956;+p<sup>2</sup>/2).</p> 
    242140 
    243 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    244 style='font-family:"Times New Roman","serif"'>The peak value is given by x<sub>peak</sub>=exp(mu-p^2).</span></p> 
     141<p>The peak value is given by x<sub>peak</sub>=exp(&#956;-p<sup>2</sup>).</span></p> 
    245142 
    246 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    247 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     143<p>&nbsp;</p> 
    248144 
    249 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    250 style='font-family:"Times New Roman","serif"'><img width=450 height=239 
    251 id="Picture 7" src="./img/pd_image010.jpg" alt=lognormal.gif></span></p> 
     145<p><img width=450 height=239 
     146id="Picture 7" src="./img/pd_image010.jpg" alt=lognormal.gif></p> 
    252147 
    253 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    254 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     148<p>&nbsp;</p> 
    255149 
    256 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    257 style='font-family:"Times New Roman","serif"'>This distribution function 
     150<p>This distribution function 
    258151spreads more and the peak shifts to the left as the p increases, requiring 
    259 higher values of Nsigmas and Npts.</span></p> 
     152higher values of Nsigmas and Npts.</p> 
    260153 
    261 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    262 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     154<p>&nbsp;</p> 
    263155 
    264 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    265 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     156<p><a name="Schulz"><h4>Schulz distribution</h4></a></p> 
    266157 
    267 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    268 style='font-family:"Times New Roman","serif"'><a name="Schulz"><h4>Schulz distribution</h4></a></span></p> 
     158<p>&nbsp;</p> 
    269159 
    270 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    271 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     160<p><img src="./img/pd_image011.png"></p> 
    272161 
    273 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    274 style='font-family:"Times New Roman","serif";position:relative;top:15.0pt'><img 
    275 width=347 height=45 src="./img/pd_image011.png"></span></p> 
     162<p>&nbsp;</p> 
    276163 
    277 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    278 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
     164<p>The x<sub>mean</sub> is the mean 
     165of the distribution and Norm is a normalization factor which is determined 
     166during the numerical calculation. </p> 
    279167 
    280 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    281 style='font-family:"Times New Roman","serif"'>The x<sub>mean</sub> is the mean 
    282 of the distribution and Norm is a normalization factor which is determined 
    283 during the numerical calculation. </span></p> 
     168<p>The z = 1/p<sup>2</sup> – 1.</p> 
     169<p>&nbsp;</p> 
    284170 
    285 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    286 style='font-family:"Times New Roman","serif"'>The z = 1/p^2 – 1.</span></p> 
    287  
    288 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    289 style='font-family:"Times New Roman","serif"'>&nbsp;</span></p> 
    290  
    291 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    292 style='font-family:"Times New Roman","serif"'>The PD (polydispersity) is </span></p> 
    293  
    294 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    295 style='font-family:"Times New Roman","serif";position:relative;top:6.0pt'><img 
    296 width=80 height=24 src="./img/pd_image012.png"></span><span 
    297 style='font-family:"Times New Roman","serif"'>.</span></p> 
    298 <p/> 
    299 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    300 style='font-family:"Times New Roman","serif"'>Note that the higher PD (polydispersity) 
     171<p>The PD (polydispersity) is </p> 
     172<p'><img src="./img/pd_image012.png"></p> 
     173<p>Note that the higher PD (polydispersity) 
    301174 might need higher values of Npts and Nsigmas. For example, at PD = 0.7 and  radisus = 60 A,  
    302  Npts >= 160, and Nsigmas >= 15 at least.</span></p> 
     175 Npts >= 160, and Nsigmas >= 15 at least.</p> 
    303176 <p/> 
    304 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt'><span 
    305 style='font-family:"Times New Roman","serif"'><img width=438 height=232 
    306 id="Picture 4" src="./img/pd_image013.jpg" alt=schulz.gif></span></p> 
     177<p><img width=438 height=232 
     178id="Picture 4" src="./img/pd_image013.jpg" alt=schulz.gif></p> 
    307179 
    308180</div> 
    309  
     181<br> 
    310182</body> 
    311  
    312 </html> 
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