[2add354] | 1 | import numpy as np |
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[4d457df] | 2 | |
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[dc5ef15] | 3 | from sas.qtgui.Plotting.PlotterData import Data1D |
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| 4 | from sas.qtgui.Plotting.PlotterData import Data2D |
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| 5 | |
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[4d457df] | 6 | from sas.sascalc.dataloader.data_info import Detector |
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| 7 | from sas.sascalc.dataloader.data_info import Source |
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| 8 | |
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| 9 | |
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| 10 | class FittingLogic(object): |
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| 11 | """ |
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| 12 | All the data-related logic. This class deals exclusively with Data1D/2D |
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| 13 | No QStandardModelIndex here. |
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| 14 | """ |
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| 15 | def __init__(self, data=None): |
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| 16 | self._data = data |
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[7248d75d] | 17 | self.data_is_loaded = False |
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| 18 | if data is not None: |
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| 19 | self.data_is_loaded = True |
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[4d457df] | 20 | |
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| 21 | @property |
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| 22 | def data(self): |
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| 23 | return self._data |
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| 24 | |
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| 25 | @data.setter |
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| 26 | def data(self, value): |
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| 27 | """ data setter """ |
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| 28 | self._data = value |
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| 29 | self.data_is_loaded = True |
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| 30 | |
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[180bd54] | 31 | def isLoadedData(self): |
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| 32 | """ accessor """ |
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| 33 | return self.data_is_loaded |
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| 34 | |
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[4d457df] | 35 | def createDefault1dData(self, interval, tab_id=0): |
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| 36 | """ |
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| 37 | Create default data for fitting perspective |
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| 38 | Only when the page is on theory mode. |
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| 39 | """ |
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| 40 | self._data = Data1D(x=interval) |
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| 41 | self._data.xaxis('\\rm{Q}', "A^{-1}") |
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| 42 | self._data.yaxis('\\rm{Intensity}', "cm^{-1}") |
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| 43 | self._data.is_data = False |
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| 44 | self._data.id = str(tab_id) + " data" |
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| 45 | self._data.group_id = str(tab_id) + " Model1D" |
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| 46 | |
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| 47 | def createDefault2dData(self, qmax, qstep, tab_id=0): |
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| 48 | """ |
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| 49 | Create 2D data by default |
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| 50 | Only when the page is on theory mode. |
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| 51 | """ |
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| 52 | self._data = Data2D() |
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| 53 | self._data.xaxis('\\rm{Q_{x}}', 'A^{-1}') |
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| 54 | self._data.yaxis('\\rm{Q_{y}}', 'A^{-1}') |
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| 55 | self._data.is_data = False |
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| 56 | self._data.id = str(tab_id) + " data" |
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| 57 | self._data.group_id = str(tab_id) + " Model2D" |
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| 58 | |
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| 59 | # Default detector |
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| 60 | self._data.detector.append(Detector()) |
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| 61 | index = len(self._data.detector) - 1 |
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| 62 | self._data.detector[index].distance = 8000 # mm |
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| 63 | self._data.source.wavelength = 6 # A |
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| 64 | self._data.detector[index].pixel_size.x = 5 # mm |
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| 65 | self._data.detector[index].pixel_size.y = 5 # mm |
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| 66 | self._data.detector[index].beam_center.x = qmax |
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| 67 | self._data.detector[index].beam_center.y = qmax |
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| 68 | # theory default: assume the beam |
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| 69 | #center is located at the center of sqr detector |
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| 70 | xmax = qmax |
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| 71 | xmin = -qmax |
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| 72 | ymax = qmax |
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| 73 | ymin = -qmax |
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| 74 | |
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[2add354] | 75 | x = np.linspace(start=xmin, stop=xmax, num=qstep, endpoint=True) |
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| 76 | y = np.linspace(start=ymin, stop=ymax, num=qstep, endpoint=True) |
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[4d457df] | 77 | # Use data info instead |
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[2add354] | 78 | new_x = np.tile(x, (len(y), 1)) |
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| 79 | new_y = np.tile(y, (len(x), 1)) |
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[4d457df] | 80 | new_y = new_y.swapaxes(0, 1) |
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| 81 | |
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| 82 | # all data required in 1d array |
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| 83 | qx_data = new_x.flatten() |
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| 84 | qy_data = new_y.flatten() |
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[2add354] | 85 | q_data = np.sqrt(qx_data * qx_data + qy_data * qy_data) |
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[4d457df] | 86 | |
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| 87 | # set all True (standing for unmasked) as default |
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[2add354] | 88 | mask = np.ones(len(qx_data), dtype=bool) |
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[4d457df] | 89 | # calculate the range of qx and qy: this way, |
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| 90 | # it is a little more independent |
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| 91 | # store x and y bin centers in q space |
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| 92 | x_bins = x |
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| 93 | y_bins = y |
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| 94 | |
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| 95 | self._data.source = Source() |
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[2add354] | 96 | self._data.data = np.ones(len(mask)) |
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| 97 | self._data.err_data = np.ones(len(mask)) |
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[4d457df] | 98 | self._data.qx_data = qx_data |
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| 99 | self._data.qy_data = qy_data |
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| 100 | self._data.q_data = q_data |
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| 101 | self._data.mask = mask |
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| 102 | self._data.x_bins = x_bins |
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| 103 | self._data.y_bins = y_bins |
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| 104 | # max and min taking account of the bin sizes |
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| 105 | self._data.xmin = xmin |
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| 106 | self._data.xmax = xmax |
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| 107 | self._data.ymin = ymin |
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| 108 | self._data.ymax = ymax |
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| 109 | |
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[7d077d1] | 110 | def new1DPlot(self, return_data, tab_id): |
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[4d457df] | 111 | """ |
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| 112 | Create a new 1D data instance based on fitting results |
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| 113 | """ |
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| 114 | # Unpack return data from Calc1D |
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| 115 | x, y, page_id, state, weight,\ |
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| 116 | fid, toggle_mode_on, \ |
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| 117 | elapsed, index, model,\ |
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| 118 | data, update_chisqr, source = return_data |
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| 119 | |
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| 120 | # Create the new plot |
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| 121 | new_plot = Data1D(x=x, y=y) |
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| 122 | new_plot.is_data = False |
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[2add354] | 123 | new_plot.dy = np.zeros(len(y)) |
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[4d457df] | 124 | _yaxis, _yunit = data.get_yaxis() |
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| 125 | _xaxis, _xunit = data.get_xaxis() |
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| 126 | |
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| 127 | new_plot.group_id = data.group_id |
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[7d077d1] | 128 | new_plot.id = str(tab_id) + " " + data.name |
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[4d457df] | 129 | new_plot.name = model.name + " [" + data.name + "]" |
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[0268aed] | 130 | new_plot.title = new_plot.name |
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[4d457df] | 131 | new_plot.xaxis(_xaxis, _xunit) |
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| 132 | new_plot.yaxis(_yaxis, _yunit) |
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| 133 | |
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[6fd4e36] | 134 | return new_plot |
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[4d457df] | 135 | |
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| 136 | def new2DPlot(self, return_data): |
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| 137 | """ |
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| 138 | Create a new 2D data instance based on fitting results |
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| 139 | """ |
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| 140 | image, data, page_id, model, state, toggle_mode_on,\ |
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| 141 | elapsed, index, fid, qmin, qmax, weight, \ |
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| 142 | update_chisqr, source = return_data |
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| 143 | |
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[2add354] | 144 | np.nan_to_num(image) |
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[4d457df] | 145 | new_plot = Data2D(image=image, err_image=data.err_data) |
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| 146 | new_plot.name = model.name + '2d' |
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| 147 | new_plot.title = "Analytical model 2D " |
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| 148 | new_plot.id = str(page_id) + " " + data.name |
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| 149 | new_plot.group_id = str(page_id) + " Model2D" |
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| 150 | new_plot.detector = data.detector |
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| 151 | new_plot.source = data.source |
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| 152 | new_plot.is_data = False |
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| 153 | new_plot.qx_data = data.qx_data |
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| 154 | new_plot.qy_data = data.qy_data |
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| 155 | new_plot.q_data = data.q_data |
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| 156 | new_plot.mask = data.mask |
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| 157 | ## plot boundaries |
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| 158 | new_plot.ymin = data.ymin |
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| 159 | new_plot.ymax = data.ymax |
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| 160 | new_plot.xmin = data.xmin |
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| 161 | new_plot.xmax = data.xmax |
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| 162 | |
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| 163 | title = data.title |
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| 164 | |
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| 165 | new_plot.is_data = False |
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| 166 | if data.is_data: |
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| 167 | data_name = str(data.name) |
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| 168 | else: |
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| 169 | data_name = str(model.__class__.__name__) + '2d' |
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| 170 | |
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| 171 | if len(title) > 1: |
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| 172 | new_plot.title = "Model2D for %s " % model.name + data_name |
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| 173 | new_plot.name = model.name + " [" + \ |
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| 174 | data_name + "]" |
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| 175 | |
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[6fd4e36] | 176 | return new_plot |
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[4d457df] | 177 | |
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| 178 | def computeDataRange(self): |
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| 179 | """ |
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[ee18d33] | 180 | Wrapper for calculating the data range based on local dataset |
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| 181 | """ |
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| 182 | return self.computeRangeFromData(self.data) |
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| 183 | |
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| 184 | def computeRangeFromData(self, data): |
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| 185 | """ |
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[4d457df] | 186 | Compute the minimum and the maximum range of the data |
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| 187 | return the npts contains in data |
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| 188 | """ |
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| 189 | qmin, qmax, npts = None, None, None |
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[ee18d33] | 190 | if isinstance(data, Data1D): |
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[4d457df] | 191 | try: |
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[ee18d33] | 192 | qmin = min(data.x) |
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| 193 | qmax = max(data.x) |
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| 194 | npts = len(data.x) |
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[4d457df] | 195 | except (ValueError, TypeError): |
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| 196 | msg = "Unable to find min/max/length of \n data named %s" % \ |
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| 197 | self.data.filename |
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| 198 | raise ValueError, msg |
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| 199 | |
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| 200 | else: |
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| 201 | qmin = 0 |
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| 202 | try: |
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[ee18d33] | 203 | x = max(np.fabs(data.xmin), np.fabs(data.xmax)) |
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| 204 | y = max(np.fabs(data.ymin), np.fabs(data.ymax)) |
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[4d457df] | 205 | except (ValueError, TypeError): |
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| 206 | msg = "Unable to find min/max of \n data named %s" % \ |
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| 207 | self.data.filename |
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| 208 | raise ValueError, msg |
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[2add354] | 209 | qmax = np.sqrt(x * x + y * y) |
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[ee18d33] | 210 | npts = len(data.data) |
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[4d457df] | 211 | return qmin, qmax, npts |
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