[01cda57] | 1 | """ |
---|
| 2 | This object is a small tool to allow user to quickly |
---|
| 3 | determine the variance in q from the |
---|
| 4 | instrumental parameters. |
---|
| 5 | """ |
---|
[4992ff2] | 6 | from PyQt5 import QtCore |
---|
| 7 | from PyQt5 import QtGui |
---|
| 8 | from PyQt5 import QtWidgets |
---|
[01cda57] | 9 | |
---|
| 10 | from twisted.internet import threads |
---|
| 11 | import sas.qtgui.Utilities.GuiUtils as GuiUtils |
---|
| 12 | from sas.qtgui.Plotting.PlotterData import Data2D |
---|
| 13 | from sas.qtgui.Plotting.Plotter2D import Plotter2DWidget |
---|
| 14 | from sas.sascalc.calculator.resolution_calculator import ResolutionCalculator |
---|
| 15 | import matplotlib.patches as patches |
---|
| 16 | |
---|
| 17 | import numpy |
---|
| 18 | import sys |
---|
| 19 | import logging |
---|
| 20 | import os |
---|
| 21 | import re |
---|
| 22 | |
---|
[b3e8629] | 23 | from .UI.ResolutionCalculatorPanelUI import Ui_ResolutionCalculatorPanel |
---|
[01cda57] | 24 | |
---|
| 25 | _SOURCE_MASS = {'Alpha': 6.64465620E-24, |
---|
| 26 | 'Deuteron': 3.34358320E-24, |
---|
| 27 | 'Neutron': 1.67492729E-24, |
---|
| 28 | 'Photon': 0.0, |
---|
| 29 | 'Proton': 1.67262137E-24, |
---|
| 30 | 'Triton': 5.00826667E-24} |
---|
| 31 | |
---|
| 32 | BG_WHITE = "background-color: rgb(255, 255, 255);" |
---|
| 33 | BG_RED = "background-color: rgb(244, 170, 164);" |
---|
| 34 | |
---|
| 35 | |
---|
[4992ff2] | 36 | class ResolutionCalculatorPanel(QtWidgets.QDialog, Ui_ResolutionCalculatorPanel): |
---|
[01cda57] | 37 | """ |
---|
| 38 | compute resolution in 2D |
---|
| 39 | """ |
---|
| 40 | def __init__(self, parent=None): |
---|
| 41 | super(ResolutionCalculatorPanel, self).__init__() |
---|
| 42 | self.setupUi(self) |
---|
| 43 | self.manager = parent |
---|
| 44 | |
---|
| 45 | # New font to display angstrom symbol |
---|
| 46 | new_font = 'font-family: -apple-system, "Helvetica Neue", "Ubuntu";' |
---|
| 47 | self.lblUnitWavelength.setStyleSheet(new_font) |
---|
| 48 | self.lblUnitQx.setStyleSheet(new_font) |
---|
| 49 | self.lblUnitQy.setStyleSheet(new_font) |
---|
| 50 | self.lblUnitSigmax.setStyleSheet(new_font) |
---|
| 51 | self.lblUnitSigmay.setStyleSheet(new_font) |
---|
| 52 | self.lblUnitSigmalamd.setStyleSheet(new_font) |
---|
| 53 | self.lblUnit1DSigma.setStyleSheet(new_font) |
---|
| 54 | |
---|
| 55 | # by default Spectrum label and cbCustomSpectrum are not visible |
---|
| 56 | self.cbCustomSpectrum.setVisible(False) |
---|
| 57 | self.lblSpectrum.setVisible(False) |
---|
| 58 | # self.onReset() |
---|
| 59 | |
---|
| 60 | # change index of comboboxes |
---|
| 61 | self.cbWaveColor.currentIndexChanged.connect(self.onSelectWaveColor) |
---|
| 62 | self.cbCustomSpectrum.currentIndexChanged.connect(self.onSelectCustomSpectrum) |
---|
| 63 | |
---|
| 64 | # push buttons |
---|
| 65 | self.cmdClose.clicked.connect(self.accept) |
---|
| 66 | self.cmdHelp.clicked.connect(self.onHelp) |
---|
| 67 | self.cmdCompute.clicked.connect(self.onCompute) |
---|
| 68 | self.cmdReset.clicked.connect(self.onReset) |
---|
| 69 | |
---|
| 70 | # input defaults |
---|
| 71 | self.qx = [] |
---|
| 72 | self.qy = [] |
---|
| 73 | # dQ defaults |
---|
| 74 | self.sigma_r = None |
---|
| 75 | self.sigma_phi = None |
---|
| 76 | self.sigma_1d = None |
---|
| 77 | |
---|
| 78 | # number of bins for wavelength and wavelength spread |
---|
| 79 | self.num_wave = 10 |
---|
| 80 | self.spectrum_dic = {} |
---|
| 81 | |
---|
| 82 | # dQ 2d image |
---|
| 83 | self.image = None |
---|
| 84 | # Source selection dic |
---|
| 85 | self.source_mass = _SOURCE_MASS |
---|
| 86 | # detector coordinate of estimation of sigmas |
---|
| 87 | self.det_coordinate = 'cartesian' |
---|
| 88 | |
---|
| 89 | self.resolution = ResolutionCalculator() |
---|
| 90 | self.spectrum_dic['Add new'] = '' |
---|
| 91 | self.spectrum_dic['Flat'] = self.resolution.get_default_spectrum() |
---|
| 92 | self.resolution.set_spectrum(self.spectrum_dic['Flat']) |
---|
| 93 | |
---|
| 94 | # validators |
---|
| 95 | self.txtWavelength.editingFinished.connect(self.checkWavelength) |
---|
| 96 | self.txtWavelengthSpread.editingFinished.connect(self.checkWavelengthSpread) |
---|
| 97 | |
---|
| 98 | self.txtDetectorPixSize.editingFinished.connect(self.checkPixels) |
---|
| 99 | self.txtDetectorSize.editingFinished.connect(self.checkPixels) |
---|
| 100 | |
---|
| 101 | self.txtSourceApertureSize.editingFinished.connect(self.checkAperture) |
---|
| 102 | self.txtSampleApertureSize.editingFinished.connect(self.checkAperture) |
---|
| 103 | |
---|
| 104 | self.txtQx.editingFinished.connect(self.checkQx_y) |
---|
| 105 | self.txtQy.editingFinished.connect(self.checkQx_y) |
---|
| 106 | |
---|
| 107 | # double validator |
---|
| 108 | self.txtSource2SampleDistance.setValidator(QtGui.QDoubleValidator()) |
---|
| 109 | self.txtSample2DetectorDistance.setValidator(QtGui.QDoubleValidator()) |
---|
| 110 | self.txtSampleOffset.setValidator(QtGui.QDoubleValidator()) |
---|
| 111 | |
---|
| 112 | # call compute to calculate with default values |
---|
| 113 | self.createTemplate2DPlot() |
---|
[7fb471d] | 114 | #self.onCompute() |
---|
[01cda57] | 115 | |
---|
| 116 | # ################################# |
---|
| 117 | # Validators: red background in line edits when wrong input |
---|
| 118 | # and display of info logging message |
---|
| 119 | # ################################# |
---|
| 120 | |
---|
| 121 | def checkWavelength(self): |
---|
| 122 | """ Validator for Wavelength |
---|
| 123 | if TOF, wavelength = min - max else only one number """ |
---|
| 124 | text_edit = self.txtWavelength # self.sender() |
---|
| 125 | if text_edit.isModified(): |
---|
[7fb471d] | 126 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 127 | input_string = str(text_edit.text()) |
---|
| 128 | if self.cbWaveColor.currentText() != 'TOF': |
---|
| 129 | input_wavelength = re.match('\d+\.?\d*', input_string) |
---|
| 130 | if input_wavelength is None: |
---|
[7fb471d] | 131 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 132 | self.cmdCompute.setEnabled(False) |
---|
| 133 | logging.info('Wavelength has to be a number.') |
---|
| 134 | else: |
---|
[7fb471d] | 135 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 136 | self.cmdCompute.setEnabled(True) |
---|
| 137 | else: |
---|
| 138 | interval_wavelength = re.match('^\d+\.?\d*\s*-\s*\d+\.?\d*$', |
---|
| 139 | input_string) |
---|
| 140 | |
---|
| 141 | if interval_wavelength is None: |
---|
[7fb471d] | 142 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 143 | self.cmdCompute.setEnabled(False) |
---|
| 144 | logging.info("Wavelength's input has to be an interval: " |
---|
| 145 | "min - max.") |
---|
| 146 | else: |
---|
| 147 | # check on min < max |
---|
| 148 | [wavelength_min, wavelength_max] = \ |
---|
| 149 | re.findall('\d+\.?\d*', interval_wavelength.group()) |
---|
| 150 | |
---|
| 151 | if float(wavelength_min) >= float(wavelength_max): |
---|
[7fb471d] | 152 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 153 | self.cmdCompute.setEnabled(False) |
---|
| 154 | logging.info("Wavelength: min must be smaller than max.") |
---|
| 155 | |
---|
| 156 | else: |
---|
[7fb471d] | 157 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 158 | self.cmdCompute.setEnabled(True) |
---|
| 159 | |
---|
| 160 | def checkWavelengthSpread(self): |
---|
| 161 | """ Validator for WavelengthSpread |
---|
| 162 | Input can be a 'number or min - max (; Number of bins)' """ |
---|
| 163 | text_edit = self.sender() |
---|
| 164 | |
---|
| 165 | if text_edit.isModified(): |
---|
[7fb471d] | 166 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 167 | if self.cbWaveColor.currentText() != 'TOF': |
---|
| 168 | pattern = '^\d+\.?\d*(|;\s*\d+)$' |
---|
| 169 | input_string = str(text_edit.text()) |
---|
| 170 | wavelength_spread_input = re.match(pattern, input_string) |
---|
| 171 | |
---|
| 172 | if wavelength_spread_input is None: |
---|
[7fb471d] | 173 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 174 | self.cmdCompute.setEnabled(False) |
---|
| 175 | logging.info('Wavelength spread has to be specified: ' |
---|
| 176 | 'single value or value; integer number of bins.') |
---|
| 177 | |
---|
| 178 | else: |
---|
| 179 | split_input = wavelength_spread_input.group().split(';') |
---|
| 180 | self.num_wave = split_input[1] if len(split_input) > 1 else 10 |
---|
[7fb471d] | 181 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 182 | self.cmdCompute.setEnabled(True) |
---|
| 183 | else: |
---|
| 184 | pattern = '^\d+\.?\d*\s*-\s*\d+\.?\d*(|;\s*\d+)$' |
---|
| 185 | input_string = str(text_edit.text()) |
---|
| 186 | wavelength_spread_input = re.match(pattern, input_string) |
---|
| 187 | |
---|
| 188 | if wavelength_spread_input is None: |
---|
[7fb471d] | 189 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 190 | self.cmdCompute.setEnabled(False) |
---|
| 191 | logging.info("Wavelength spread has to be specified: " |
---|
| 192 | "doublet separated by '-' with optional " |
---|
| 193 | "number of bins (given after ';'). " |
---|
| 194 | "For example, 0.1 - 0.1 (; 20).") |
---|
| 195 | |
---|
| 196 | else: |
---|
| 197 | split_input = wavelength_spread_input.group().split(';') |
---|
| 198 | self.num_wave = split_input[1] if len( |
---|
| 199 | split_input) > 1 else 10 |
---|
[7fb471d] | 200 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 201 | self.cmdCompute.setEnabled(True) |
---|
| 202 | |
---|
| 203 | def checkPixels(self): |
---|
| 204 | """ Validator for detector pixel size and number """ |
---|
| 205 | text_edit = self.sender() |
---|
| 206 | |
---|
| 207 | if text_edit.isModified(): |
---|
[7fb471d] | 208 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 209 | pattern = '^\d+\.?\d*,\s*\d+\.?\d*$' |
---|
| 210 | input_string = str(text_edit.text()) |
---|
| 211 | pixels_input = re.match(pattern, input_string) |
---|
| 212 | |
---|
| 213 | if pixels_input is None: |
---|
[7fb471d] | 214 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 215 | self.cmdCompute.setEnabled(False) |
---|
| 216 | logging.info('The input for the detector should contain 2 ' |
---|
| 217 | 'values separated by a comma.') |
---|
| 218 | |
---|
| 219 | else: |
---|
[7fb471d] | 220 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 221 | self.cmdCompute.setEnabled(True) |
---|
| 222 | |
---|
| 223 | def checkQx_y(self): |
---|
| 224 | """ Validator for qx and qy inputs """ |
---|
| 225 | Q_modified = [self.txtQx.isModified(), self.txtQy.isModified()] |
---|
| 226 | if any(Q_modified): |
---|
| 227 | pattern = '^-?\d+\.?\d*(,\s*-?\d+\.?\d*)*$' |
---|
| 228 | text_edit = self.txtQx if Q_modified[0] else self.txtQy |
---|
| 229 | input_string = str(text_edit.text()) |
---|
| 230 | q_input = re.match(pattern, input_string) |
---|
| 231 | if q_input is None: |
---|
[7fb471d] | 232 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 233 | self.cmdCompute.setEnabled(False) |
---|
[fc4fec8] | 234 | logging.info('Qx and Qy should contain one or more comma-separated numbers.') |
---|
[01cda57] | 235 | else: |
---|
[7fb471d] | 236 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 237 | self.cmdCompute.setEnabled(True) |
---|
| 238 | qx = str(self.txtQx.text()).split(',') |
---|
| 239 | qy = str(self.txtQy.text()).split(',') |
---|
| 240 | |
---|
| 241 | if len(qx) == 1 and len(qy) > 1: |
---|
| 242 | fill_qx = ', '.join([qx[0]] * len(qy)) |
---|
| 243 | self.txtQx.setText(fill_qx) |
---|
| 244 | |
---|
| 245 | elif len(qy) == 1 and len(qx) > 1: |
---|
| 246 | fill_qy = ', '.join([qy[0]] * len(qx)) |
---|
| 247 | self.txtQy.setText(fill_qy) |
---|
| 248 | |
---|
| 249 | elif len(qx) != len(qy): |
---|
[7fb471d] | 250 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 251 | self.cmdCompute.setEnabled(False) |
---|
| 252 | logging.info( |
---|
[fc4fec8] | 253 | 'Qx and Qy should have the same number of elements.') |
---|
[01cda57] | 254 | |
---|
| 255 | else: |
---|
[7fb471d] | 256 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 257 | self.cmdCompute.setEnabled(True) |
---|
| 258 | |
---|
| 259 | def checkAperture(self): |
---|
| 260 | """ Validator for Sample and Source apertures""" |
---|
| 261 | text_edit = self.sender() |
---|
| 262 | |
---|
| 263 | if text_edit.isModified(): |
---|
[7fb471d] | 264 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 265 | input_string = str(text_edit.text()) |
---|
| 266 | pattern = '^\d+\.?\d*(|,\s*\d+)$' |
---|
| 267 | aperture_input = re.match(pattern, input_string) |
---|
| 268 | |
---|
| 269 | if aperture_input is None: |
---|
[7fb471d] | 270 | text_edit.setStyleSheet(BG_RED) |
---|
[01cda57] | 271 | self.cmdCompute.setEnabled(False) |
---|
| 272 | logging.info('A circular aperture is defined by a single ' |
---|
| 273 | 'value (diameter). A rectangular aperture is ' |
---|
| 274 | 'defined by 2 values separated by a comma.') |
---|
| 275 | |
---|
| 276 | else: |
---|
[7fb471d] | 277 | text_edit.setStyleSheet(BG_WHITE) |
---|
[01cda57] | 278 | self.cmdCompute.setEnabled(True) |
---|
| 279 | |
---|
| 280 | # ################################# |
---|
| 281 | # Slots associated with signals from comboboxes |
---|
| 282 | # ################################# |
---|
| 283 | |
---|
| 284 | def onSelectWaveColor(self): |
---|
| 285 | """ Modify layout of GUI when TOF selected: add elements |
---|
| 286 | and modify default entry of Wavelength """ |
---|
| 287 | list_wdata = self.resolution.get_wave_list() |
---|
| 288 | min_lambda = min(list_wdata[0]) |
---|
| 289 | |
---|
| 290 | min_wspread = min(list_wdata[1]) |
---|
| 291 | max_wspread = max(list_wdata[1]) |
---|
| 292 | |
---|
| 293 | if self.cbWaveColor.currentText() == 'TOF': |
---|
| 294 | self.cbCustomSpectrum.setVisible(True) |
---|
| 295 | self.lblSpectrum.setVisible(True) |
---|
| 296 | # Get information about wavelength and spread |
---|
| 297 | |
---|
| 298 | if len(list_wdata[0]) < 2: |
---|
| 299 | max_lambda = 2 * min_lambda |
---|
| 300 | else: |
---|
| 301 | max_lambda = max(list_wdata[0]) |
---|
| 302 | self.txtWavelength.setText('{} - {}'.format(min_lambda, max_lambda)) |
---|
| 303 | self.txtWavelengthSpread.setText('{} - {}'.format(min_wspread, |
---|
| 304 | max_wspread)) |
---|
| 305 | |
---|
| 306 | else: |
---|
| 307 | self.cbCustomSpectrum.setVisible(False) |
---|
| 308 | self.lblSpectrum.setVisible(False) |
---|
| 309 | # modify Wavelength line edit only if set for TOF (2 elements) |
---|
| 310 | |
---|
| 311 | if len(self.txtWavelength.text().split('-')) >= 2: |
---|
| 312 | self.txtWavelength.setText(str(min_lambda)) |
---|
| 313 | self.txtWavelengthSpread.setText(str(min_wspread)) |
---|
| 314 | |
---|
| 315 | def onSelectCustomSpectrum(self): |
---|
| 316 | """ On Spectrum Combobox event""" |
---|
| 317 | if self.cbCustomSpectrum.currentText() == 'Add New': |
---|
[4992ff2] | 318 | datafile = QtWidgets.QFileDialog.getOpenFileName( |
---|
[01cda57] | 319 | self, "Choose a spectral distribution file", "", |
---|
| 320 | "All files (*.*)", |
---|
[4992ff2] | 321 | QtWidgets.QFileDialog.DontUseNativeDialog) |
---|
[01cda57] | 322 | |
---|
| 323 | if datafile is None or str(datafile) == '': |
---|
| 324 | logging.info("No spectral distribution data chosen.") |
---|
| 325 | self.cbCustomSpectrum.setCurrentIndex(0) |
---|
| 326 | self.resolution.set_spectrum(self.spectrum_dic['Flat']) |
---|
| 327 | return |
---|
| 328 | |
---|
| 329 | try: |
---|
| 330 | basename = os.path.basename(datafile) |
---|
[b3e8629] | 331 | if basename not in list(self.spectrum_dic.keys()): |
---|
[01cda57] | 332 | self.cbCustomSpectrum.addItem(basename) |
---|
| 333 | |
---|
| 334 | input_f = open(datafile, 'r') |
---|
| 335 | buff = input_f.read() |
---|
| 336 | lines = buff.split('\n') |
---|
| 337 | |
---|
| 338 | wavelength = [] |
---|
| 339 | intensity = [] |
---|
| 340 | |
---|
| 341 | for line in lines: |
---|
| 342 | toks = line.split() |
---|
| 343 | try: |
---|
| 344 | wave = float(toks[0]) |
---|
| 345 | intens = float(toks[1]) |
---|
| 346 | wavelength.append(wave) |
---|
| 347 | intensity.append(intens) |
---|
| 348 | except: |
---|
| 349 | logging.info('Could not extract values from file') |
---|
| 350 | except: |
---|
| 351 | raise |
---|
| 352 | |
---|
| 353 | self.spectrum_dic[basename] = [wavelength, intensity] |
---|
| 354 | self.resolution.set_spectrum(self.spectrum_dic[basename]) |
---|
| 355 | return |
---|
| 356 | |
---|
| 357 | # ################################# |
---|
| 358 | # Slots associated with signals from push buttons |
---|
| 359 | # ################################# |
---|
| 360 | |
---|
| 361 | def onHelp(self): |
---|
| 362 | """ |
---|
| 363 | Bring up the Resolution Calculator Documentation whenever |
---|
| 364 | the HELP button is clicked. |
---|
| 365 | Calls Documentation Window with the path of the location within the |
---|
| 366 | documentation tree (after /doc/ ....". |
---|
| 367 | """ |
---|
| 368 | try: |
---|
| 369 | location = GuiUtils.HELP_DIRECTORY_LOCATION + \ |
---|
| 370 | "/user/sasgui/perspectives/calculator/resolution_calculator_help.html" |
---|
| 371 | self.manager._helpView.load(QtCore.QUrl(location)) |
---|
| 372 | self.manager._helpView.show() |
---|
| 373 | |
---|
| 374 | except AttributeError: |
---|
| 375 | # No manager defined - testing and standalone runs |
---|
| 376 | pass |
---|
| 377 | |
---|
| 378 | def onReset(self): |
---|
| 379 | # by default Spectrum label and cbCustomSpectrum are not visible |
---|
| 380 | self.cbCustomSpectrum.setVisible(False) |
---|
| 381 | self.lblSpectrum.setVisible(False) |
---|
| 382 | # Comboboxes |
---|
| 383 | self.cbCustomSpectrum.setCurrentIndex([self.cbCustomSpectrum.itemText(i) |
---|
| 384 | for i in range(self.cbCustomSpectrum.count())].index('Flat')) |
---|
| 385 | self.cbSource.setCurrentIndex([self.cbSource.itemText(i) for i in |
---|
| 386 | range(self.cbSource.count())].index('Neutron')) |
---|
| 387 | self.cbWaveColor.setCurrentIndex([self.cbWaveColor.itemText(i) for i |
---|
| 388 | in range(self.cbWaveColor.count())].index('Monochromatic')) |
---|
| 389 | # LineEdits |
---|
| 390 | self.txtDetectorPixSize.setText('0.5, 0.5') |
---|
| 391 | self.txtDetectorSize.setText('128, 128') |
---|
| 392 | self.txtSample2DetectorDistance.setText('1000') |
---|
| 393 | self.txtSampleApertureSize.setText('1.27') |
---|
| 394 | self.txtSampleOffset.setText('0') |
---|
| 395 | self.txtSource2SampleDistance.setText('1627') |
---|
| 396 | self.txtSourceApertureSize.setText('3.81') |
---|
| 397 | self.txtWavelength.setText('6.0') |
---|
| 398 | self.txtWavelengthSpread.setText('0.125') |
---|
| 399 | self.txtQx.setText('0.0') |
---|
| 400 | self.txtQy.setText('0.0') |
---|
| 401 | self.txt1DSigma.setText('0.0008289') |
---|
| 402 | self.txtSigma_x.setText('0.0008288') |
---|
| 403 | self.txtSigma_y.setText('0.0008288') |
---|
| 404 | self.txtSigma_lamd.setText('3.168e-05') |
---|
| 405 | |
---|
| 406 | self.image = None |
---|
| 407 | self.source_mass = _SOURCE_MASS |
---|
| 408 | self.det_coordinate = 'cartesian' |
---|
| 409 | self.num_wave = 10 |
---|
| 410 | self.spectrum_dic = {} |
---|
| 411 | self.spectrum_dic['Add new'] = '' |
---|
| 412 | self.spectrum_dic['Flat'] = self.resolution.get_default_spectrum() |
---|
| 413 | self.resolution.set_spectrum(self.spectrum_dic['Flat']) |
---|
| 414 | # Reset plot |
---|
| 415 | self.onCompute() |
---|
| 416 | |
---|
| 417 | # TODO Keep legacy validators?? |
---|
| 418 | def onCompute(self): |
---|
| 419 | """ |
---|
| 420 | Execute the computation of resolution |
---|
| 421 | """ |
---|
| 422 | # Q min max list default |
---|
| 423 | qx_min = [] |
---|
| 424 | qx_max = [] |
---|
| 425 | qy_min = [] |
---|
| 426 | qy_max = [] |
---|
| 427 | # possible max qrange |
---|
| 428 | self.resolution.qxmin_limit = 0 |
---|
| 429 | self.resolution.qxmax_limit = 0 |
---|
| 430 | self.resolution.qymin_limit = 0 |
---|
| 431 | self.resolution.qymax_limit = 0 |
---|
| 432 | |
---|
| 433 | try: |
---|
| 434 | # Get all the values to compute |
---|
| 435 | wavelength = self._str2longlist(self.txtWavelength.text()) |
---|
| 436 | |
---|
| 437 | source = self.cbSource.currentText() |
---|
| 438 | mass = self.source_mass[str(source)] |
---|
| 439 | self.resolution.set_neutron_mass(float(mass)) |
---|
| 440 | |
---|
| 441 | wavelength_spread = self._str2longlist(\ |
---|
| 442 | self.txtWavelengthSpread.text().split(';')[0]) |
---|
| 443 | # Validate the wave inputs |
---|
| 444 | wave_input = self._validate_q_input(wavelength, wavelength_spread) |
---|
| 445 | if wave_input is not None: |
---|
| 446 | wavelength, wavelength_spread = wave_input |
---|
| 447 | |
---|
| 448 | self.resolution.set_wave(wavelength) |
---|
| 449 | self.resolution.set_wave_spread(wavelength_spread) |
---|
| 450 | |
---|
| 451 | # use legacy validator for correct input assignment |
---|
| 452 | |
---|
| 453 | source_aperture_size = self.txtSourceApertureSize.text() |
---|
| 454 | source_aperture_size = self._str2longlist(source_aperture_size) |
---|
| 455 | self.resolution.set_source_aperture_size(source_aperture_size) |
---|
| 456 | |
---|
| 457 | sample_aperture_size = self.txtSampleApertureSize.text() |
---|
| 458 | sample_aperture_size = self._string2list(sample_aperture_size) |
---|
| 459 | self.resolution.set_sample_aperture_size(sample_aperture_size) |
---|
| 460 | |
---|
| 461 | source2sample_distance = self.txtSource2SampleDistance.text() |
---|
| 462 | source2sample_distance = self._string2list(source2sample_distance) |
---|
| 463 | self.resolution.set_source2sample_distance(source2sample_distance) |
---|
| 464 | |
---|
| 465 | sample2sample_distance = self.txtSampleOffset.text() |
---|
| 466 | sample2sample_distance = self._string2list(sample2sample_distance) |
---|
| 467 | self.resolution.set_sample2sample_distance(sample2sample_distance) |
---|
| 468 | |
---|
| 469 | sample2detector_distance = self.txtSample2DetectorDistance.text() |
---|
| 470 | sample2detector_distance = self._string2list( |
---|
| 471 | sample2detector_distance) |
---|
| 472 | self.resolution.set_sample2detector_distance( |
---|
| 473 | sample2detector_distance) |
---|
| 474 | |
---|
| 475 | detector_size = self.txtDetectorSize.text() |
---|
| 476 | detector_size = self._string2list(detector_size) |
---|
| 477 | self.resolution.set_detector_size(detector_size) |
---|
| 478 | |
---|
| 479 | detector_pix_size = self.txtDetectorPixSize.text() |
---|
| 480 | detector_pix_size = self._string2list(detector_pix_size) |
---|
| 481 | self.resolution.set_detector_pix_size(detector_pix_size) |
---|
| 482 | |
---|
| 483 | self.qx = self._string2inputlist(self.txtQx.text()) |
---|
| 484 | self.qy = self._string2inputlist(self.txtQy.text()) |
---|
| 485 | |
---|
| 486 | # Find min max of qs |
---|
| 487 | xmin = min(self.qx) |
---|
| 488 | xmax = max(self.qx) |
---|
| 489 | ymin = min(self.qy) |
---|
| 490 | ymax = max(self.qy) |
---|
| 491 | if not self._validate_q_input(self.qx, self.qy): |
---|
[fc4fec8] | 492 | raise ValueError("Invalid Q input") |
---|
[01cda57] | 493 | except: |
---|
| 494 | msg = "An error occurred during the resolution computation." |
---|
| 495 | msg += "Please check your inputs..." |
---|
| 496 | logging.warning(msg) |
---|
| 497 | return |
---|
| 498 | |
---|
| 499 | # Validate the q inputs |
---|
| 500 | q_input = self._validate_q_input(self.qx, self.qy) |
---|
| 501 | if q_input is not None: |
---|
| 502 | self.qx, self.qy = q_input |
---|
| 503 | |
---|
| 504 | # Make list of q min max for mapping |
---|
| 505 | for i in range(len(self.qx)): |
---|
| 506 | qx_min.append(xmin) |
---|
| 507 | qx_max.append(xmax) |
---|
| 508 | for i in range(len(self.qy)): |
---|
| 509 | qy_min.append(ymin) |
---|
| 510 | qy_max.append(ymax) |
---|
| 511 | |
---|
| 512 | # Compute the resolution |
---|
| 513 | if self.image is not None: |
---|
| 514 | self.resolution.reset_image() |
---|
| 515 | |
---|
| 516 | # Compute and get the image plot |
---|
| 517 | try: |
---|
[fc4fec8] | 518 | cal_res = threads.deferToThread(self.map_wrapper, |
---|
| 519 | self.calc_func, |
---|
| 520 | self.qx, |
---|
| 521 | self.qy, |
---|
| 522 | qx_min, |
---|
| 523 | qx_max, |
---|
| 524 | qy_min, qy_max) |
---|
| 525 | |
---|
| 526 | cal_res.addCallback(self.complete) |
---|
[7fb471d] | 527 | cal_res.addErrback(self.calculateFailed) |
---|
[fc4fec8] | 528 | |
---|
| 529 | # logging.info("Computation is in progress...") |
---|
[01cda57] | 530 | self.cmdCompute.setText('Wait...') |
---|
| 531 | self.cmdCompute.setEnabled(False) |
---|
| 532 | except: |
---|
| 533 | raise |
---|
| 534 | |
---|
[7fb471d] | 535 | def calculateFailed(self, reason): |
---|
| 536 | print("calculateFailed Failed with:\n", reason) |
---|
| 537 | pass |
---|
| 538 | |
---|
[fc4fec8] | 539 | def complete(self, image): |
---|
[01cda57] | 540 | """ |
---|
| 541 | Complete computation |
---|
| 542 | """ |
---|
| 543 | self.image = image |
---|
| 544 | |
---|
| 545 | # Get and format the sigmas |
---|
| 546 | sigma_r = self.formatNumber(self.resolution.sigma_1) |
---|
| 547 | sigma_phi = self.formatNumber(self.resolution.sigma_2) |
---|
| 548 | sigma_lamd = self.formatNumber(self.resolution.sigma_lamd) |
---|
| 549 | sigma_1d = self.formatNumber(self.resolution.sigma_1d) |
---|
| 550 | |
---|
| 551 | # Set output values |
---|
| 552 | self.txtSigma_x.setText(str(sigma_r)) |
---|
| 553 | self.txtSigma_y.setText(str(sigma_phi)) |
---|
| 554 | self.txtSigma_lamd.setText(str(sigma_lamd)) |
---|
| 555 | self.txt1DSigma.setText(str(sigma_1d)) |
---|
| 556 | |
---|
| 557 | self.cmdCompute.setText('Compute') |
---|
| 558 | self.cmdCompute.setEnabled(True) |
---|
[fc4fec8] | 559 | |
---|
| 560 | self.new2DPlot() |
---|
| 561 | |
---|
[01cda57] | 562 | return |
---|
| 563 | |
---|
[fc4fec8] | 564 | def map_wrapper(self, func, qx, qy, qx_min, qx_max, qy_min, qy_max): |
---|
[01cda57] | 565 | """ |
---|
| 566 | Prepare the Mapping for the computation |
---|
| 567 | : params qx, qy, qx_min, qx_max, qy_min, qy_max: |
---|
| 568 | : return: image (numpy array) |
---|
| 569 | """ |
---|
[7fb471d] | 570 | # This fails in py3 with |
---|
| 571 | # [Failure instance: Traceback: <class 'TypeError'>: 'map' object is not subscriptable |
---|
| 572 | # INVESTIGATE |
---|
[fc4fec8] | 573 | image = map(func, qx, qy, |
---|
| 574 | qx_min, qx_max, |
---|
| 575 | qy_min, qy_max)[0] |
---|
| 576 | return image |
---|
| 577 | |
---|
| 578 | def calc_func(self, qx, qy, qx_min, qx_max, qy_min, qy_max): |
---|
| 579 | """ |
---|
| 580 | Perform the calculation for a given set of Q values. |
---|
| 581 | : return: image (numpy array) |
---|
| 582 | """ |
---|
[01cda57] | 583 | try: |
---|
| 584 | qx_value = float(qx) |
---|
| 585 | qy_value = float(qy) |
---|
[fc4fec8] | 586 | except : |
---|
| 587 | raise ValueError |
---|
| 588 | |
---|
[01cda57] | 589 | # calculate 2D resolution distribution image |
---|
| 590 | image = self.resolution.compute_and_plot(qx_value, qy_value, |
---|
| 591 | qx_min, qx_max, qy_min, |
---|
| 592 | qy_max, |
---|
| 593 | self.det_coordinate) |
---|
| 594 | return image |
---|
| 595 | |
---|
| 596 | # ################################# |
---|
| 597 | # Legacy validators |
---|
| 598 | # ################################# |
---|
[fc4fec8] | 599 | def _string2list(self, input_string): |
---|
[01cda57] | 600 | """ |
---|
| 601 | Change NNN, NNN to list,ie. [NNN, NNN] where NNN is a number |
---|
| 602 | """ |
---|
[fc4fec8] | 603 | new_numbers_list = [] |
---|
[01cda57] | 604 | # check the number of floats |
---|
| 605 | try: |
---|
[fc4fec8] | 606 | strg = float(input_string) |
---|
| 607 | new_numbers_list.append(strg) |
---|
[01cda57] | 608 | except: |
---|
[fc4fec8] | 609 | string_split = input_string.split(',') |
---|
[170e95d] | 610 | if len(string_split) == 1 or len(string_split) == 2: |
---|
| 611 | new_numbers_list = [float(item) for item in string_split] |
---|
[01cda57] | 612 | else: |
---|
[fc4fec8] | 613 | msg = "The numbers must be one or two (separated by ',')" |
---|
[01cda57] | 614 | logging.info(msg) |
---|
[b3e8629] | 615 | raise RuntimeError(msg) |
---|
[01cda57] | 616 | |
---|
[fc4fec8] | 617 | return new_numbers_list |
---|
[01cda57] | 618 | |
---|
[fc4fec8] | 619 | def _string2inputlist(self, input_string): |
---|
[01cda57] | 620 | """ |
---|
| 621 | Change NNN, NNN,... to list,ie. [NNN, NNN,...] where NNN is a number |
---|
[fc4fec8] | 622 | : return new_list: string like list |
---|
[01cda57] | 623 | """ |
---|
[fc4fec8] | 624 | new_list = [] |
---|
| 625 | string_split = input_string.split(',') |
---|
| 626 | try: |
---|
| 627 | new_list = [float(t) for t in string_split] |
---|
| 628 | except: |
---|
[b3e8629] | 629 | logging.error(sys.exc_info()[1]) |
---|
[fc4fec8] | 630 | return new_list |
---|
[01cda57] | 631 | |
---|
[fc4fec8] | 632 | def _str2longlist(self, input_string): |
---|
[01cda57] | 633 | """ |
---|
[fc4fec8] | 634 | Change NNN, NNN,... to list, NNN - NNN ; NNN to list, or float to list |
---|
| 635 | : return new_string: string like list |
---|
| 636 | """ |
---|
[01cda57] | 637 | try: |
---|
| 638 | # is float |
---|
[fc4fec8] | 639 | out = [float(input_string)] |
---|
[01cda57] | 640 | return out |
---|
| 641 | except: |
---|
| 642 | if self.cbWaveColor.currentText() == 'Monochromatic': |
---|
| 643 | logging.warning("Wrong format of inputs.") |
---|
| 644 | else: |
---|
| 645 | try: |
---|
| 646 | # has a '-' |
---|
[fc4fec8] | 647 | if input_string.count('-') > 0: |
---|
| 648 | value = input_string.split('-') |
---|
[01cda57] | 649 | if value[1].count(';') > 0: |
---|
| 650 | # has a ';' |
---|
| 651 | last_list = value[1].split(';') |
---|
[fc4fec8] | 652 | num = numpy.ceil(float(last_list[1])) |
---|
[01cda57] | 653 | max_value = float(last_list[0]) |
---|
| 654 | self.num_wave = num |
---|
| 655 | else: |
---|
| 656 | # default num |
---|
| 657 | num = self.num_wave |
---|
| 658 | max_value = float(value[1]) |
---|
| 659 | min_value = float(value[0]) |
---|
| 660 | # make a list |
---|
[fc4fec8] | 661 | bin_size = numpy.fabs(max_value - min_value) / (num - 1) |
---|
[01cda57] | 662 | out = [min_value + bin_size * bnum for bnum in |
---|
| 663 | range(num)] |
---|
| 664 | return out |
---|
[fc4fec8] | 665 | if input_string.count(',') > 0: |
---|
| 666 | out = self._string2inputlist(input_string) |
---|
[01cda57] | 667 | return out |
---|
| 668 | except: |
---|
[b3e8629] | 669 | logging.error(sys.exc_info()[1]) |
---|
[01cda57] | 670 | |
---|
| 671 | def _validate_q_input(self, qx, qy): |
---|
| 672 | """ |
---|
| 673 | Check if q inputs are valid |
---|
| 674 | : params qx: qx as a list |
---|
| 675 | : params qy: qy as a list |
---|
| 676 | : return: True/False |
---|
| 677 | """ |
---|
| 678 | # check qualifications |
---|
| 679 | if qx.__class__.__name__ != 'list': |
---|
| 680 | return None |
---|
| 681 | if qy.__class__.__name__ != 'list': |
---|
| 682 | return None |
---|
| 683 | if len(qx) < 1: |
---|
| 684 | return None |
---|
| 685 | if len(qy) < 1: |
---|
| 686 | return None |
---|
| 687 | # allow one input |
---|
| 688 | if len(qx) == 1 and len(qy) > 1: |
---|
| 689 | qx = [qx[0] for ind in range(len(qy))] |
---|
| 690 | |
---|
| 691 | if len(qy) == 1 and len(qx) > 1: |
---|
| 692 | qy = [qy[0] for ind in range(len(qx))] |
---|
| 693 | # check length |
---|
| 694 | if len(qx) != len(qy): |
---|
| 695 | return None |
---|
| 696 | if qx is None or qy is None: |
---|
| 697 | return None |
---|
| 698 | return qx, qy |
---|
| 699 | |
---|
| 700 | def formatNumber(self, value=None): |
---|
| 701 | """ |
---|
| 702 | Return a float in a standardized, human-readable formatted string |
---|
| 703 | """ |
---|
| 704 | try: |
---|
| 705 | value = float(value) |
---|
| 706 | except: |
---|
| 707 | output = None |
---|
| 708 | return output |
---|
| 709 | |
---|
| 710 | output = "%-7.4g" % value |
---|
| 711 | return output.lstrip().rstrip() |
---|
| 712 | |
---|
| 713 | # ################################# |
---|
| 714 | # Plot |
---|
| 715 | # ################################# |
---|
| 716 | |
---|
| 717 | def createTemplate2DPlot(self): |
---|
| 718 | """ |
---|
| 719 | Create a template for 2D data |
---|
| 720 | """ |
---|
| 721 | self.plotter = Plotter2DWidget(self, quickplot=True) |
---|
| 722 | self.plotter.scale = 'linear' |
---|
[fc4fec8] | 723 | self.plotter.cmap = None |
---|
[4992ff2] | 724 | layout = QtWidgets.QHBoxLayout() |
---|
[01cda57] | 725 | layout.setContentsMargins(0, 0, 0, 0) |
---|
| 726 | self.graphicsView.setLayout(layout) |
---|
| 727 | layout.addWidget(self.plotter) |
---|
| 728 | |
---|
[fc4fec8] | 729 | def new2DPlot(self): |
---|
[01cda57] | 730 | """ |
---|
| 731 | Create a new 2D data instance based on computing results |
---|
| 732 | """ |
---|
| 733 | qx_min, qx_max, qy_min, qy_max = self.resolution.get_detector_qrange() |
---|
| 734 | |
---|
| 735 | dx_size = (qx_max - qx_min) / (1000 - 1) |
---|
| 736 | dy_size = (qy_max - qy_min) / (1000 - 1) |
---|
| 737 | x_val = numpy.arange(qx_min, qx_max, dx_size) |
---|
| 738 | y_val = numpy.arange(qy_max, qy_min, -dy_size) |
---|
| 739 | |
---|
[170e95d] | 740 | if len(self.plotter.ax.patches): |
---|
| 741 | self.plotter.ax.patches[0].remove() |
---|
| 742 | |
---|
[01cda57] | 743 | self.drawLines() |
---|
| 744 | |
---|
| 745 | self.plotter.data = Data2D(image=self.image, |
---|
| 746 | qx_data=x_val, |
---|
| 747 | qy_data=y_val, |
---|
| 748 | xmin=qx_min, xmax=qx_max, |
---|
| 749 | ymin=qy_min, ymax=qy_max) |
---|
| 750 | |
---|
| 751 | self.plotter.plot() |
---|
| 752 | self.plotter.show() |
---|
| 753 | |
---|
| 754 | def drawLines(self): |
---|
| 755 | """ |
---|
| 756 | Draw lines in image if applicable |
---|
| 757 | """ |
---|
| 758 | wave_list, _ = self.resolution.get_wave_list() |
---|
| 759 | if len(wave_list) > 1 and wave_list[-1] == max(wave_list): |
---|
| 760 | color = 'g' |
---|
| 761 | # draw a green rectangle(limit for the longest wavelength |
---|
| 762 | # to be involved) for tof inputs |
---|
| 763 | # Get the params from resolution |
---|
| 764 | # plotting range for largest wavelength |
---|
| 765 | qx_min = self.resolution.qx_min |
---|
| 766 | qx_max = self.resolution.qx_max |
---|
| 767 | qy_min = self.resolution.qy_min |
---|
| 768 | qy_max = self.resolution.qy_max |
---|
| 769 | # detector range |
---|
| 770 | detector_qx_min = self.resolution.detector_qx_min |
---|
| 771 | detector_qx_max = self.resolution.detector_qx_max |
---|
| 772 | detector_qy_min = self.resolution.detector_qy_min |
---|
| 773 | detector_qy_max = self.resolution.detector_qy_max |
---|
| 774 | |
---|
| 775 | rect = patches.Rectangle((detector_qx_min + 0.0002, |
---|
| 776 | detector_qy_min + 0.0002), |
---|
| 777 | detector_qx_max - detector_qx_min, |
---|
| 778 | detector_qy_max - detector_qy_min, |
---|
| 779 | linewidth=2, |
---|
| 780 | edgecolor=color, facecolor='none') |
---|
| 781 | self.plotter.ax.add_patch(rect) |
---|
| 782 | else: |
---|
| 783 | qx_min, qx_max, qy_min, qy_max = self.resolution.get_detector_qrange() |
---|
| 784 | # detector range |
---|
| 785 | detector_qx_min = self.resolution.qxmin_limit |
---|
| 786 | detector_qx_max = self.resolution.qxmax_limit |
---|
| 787 | detector_qy_min = self.resolution.qymin_limit |
---|
| 788 | detector_qy_max = self.resolution.qymax_limit |
---|
| 789 | |
---|
| 790 | xmin = min(self.qx) |
---|
| 791 | xmax = max(self.qx) |
---|
| 792 | ymin = min(self.qy) |
---|
| 793 | ymax = max(self.qy) |
---|
| 794 | |
---|
| 795 | if xmin < detector_qx_min or xmax > detector_qx_max or \ |
---|
| 796 | ymin < detector_qy_min or ymax > detector_qy_max: |
---|
| 797 | # message |
---|
| 798 | msg = 'At least one q value located out side of\n' |
---|
| 799 | msg += " the detector range (%s < qx < %s, %s < qy < %s),\n" % \ |
---|
| 800 | (self.formatNumber(detector_qx_min), |
---|
| 801 | self.formatNumber(detector_qx_max), |
---|
| 802 | self.formatNumber(detector_qy_min), |
---|
| 803 | self.formatNumber(detector_qy_max)) |
---|
| 804 | msg += " is ignored in computation.\n" |
---|
| 805 | |
---|
| 806 | logging.warning(msg) |
---|
| 807 | |
---|
| 808 | # Draw zero axis lines. |
---|
| 809 | if qy_min < 0 <= qy_max: |
---|
| 810 | self.plotter.ax.axhline(linewidth=1) |
---|
| 811 | |
---|
| 812 | if qx_min < 0 <= qx_max: |
---|
| 813 | self.plotter.ax.axvline(linewidth=1) |
---|