1 | """ |
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2 | This object is a small tool to allow user to quickly |
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3 | determine the variance in q from the |
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4 | instrumental parameters. |
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5 | """ |
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6 | from PyQt5 import QtCore |
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7 | from PyQt5 import QtGui |
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8 | from PyQt5 import QtWidgets |
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9 | |
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10 | from twisted.internet import threads |
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11 | import sas.qtgui.Utilities.GuiUtils as GuiUtils |
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12 | from sas.qtgui.Plotting.PlotterData import Data2D |
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13 | from sas.qtgui.Plotting.Plotter2D import Plotter2DWidget |
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14 | from sas.sascalc.calculator.resolution_calculator import ResolutionCalculator |
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15 | import matplotlib.patches as patches |
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16 | |
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17 | import numpy |
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18 | import sys |
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19 | import logging |
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20 | import os |
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21 | import re |
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22 | |
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23 | from .UI.ResolutionCalculatorPanelUI import Ui_ResolutionCalculatorPanel |
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24 | |
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25 | _SOURCE_MASS = {'Alpha': 6.64465620E-24, |
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26 | 'Deuteron': 3.34358320E-24, |
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27 | 'Neutron': 1.67492729E-24, |
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28 | 'Photon': 0.0, |
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29 | 'Proton': 1.67262137E-24, |
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30 | 'Triton': 5.00826667E-24} |
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31 | |
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32 | BG_WHITE = "background-color: rgb(255, 255, 255);" |
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33 | BG_RED = "background-color: rgb(244, 170, 164);" |
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34 | |
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35 | |
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36 | class ResolutionCalculatorPanel(QtWidgets.QDialog, Ui_ResolutionCalculatorPanel): |
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37 | """ |
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38 | compute resolution in 2D |
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39 | """ |
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40 | def __init__(self, parent=None): |
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41 | super(ResolutionCalculatorPanel, self).__init__() |
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42 | self.setupUi(self) |
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43 | # disable the context help icon |
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44 | self.setWindowFlags(self.windowFlags() & ~QtCore.Qt.WindowContextHelpButtonHint) |
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45 | |
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46 | self.manager = parent |
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47 | |
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48 | # New font to display angstrom symbol |
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49 | new_font = 'font-family: -apple-system, "Helvetica Neue", "Ubuntu";' |
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50 | self.lblUnitWavelength.setStyleSheet(new_font) |
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51 | self.lblUnitQx.setStyleSheet(new_font) |
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52 | self.lblUnitQy.setStyleSheet(new_font) |
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53 | self.lblUnitSigmax.setStyleSheet(new_font) |
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54 | self.lblUnitSigmay.setStyleSheet(new_font) |
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55 | self.lblUnitSigmalamd.setStyleSheet(new_font) |
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56 | self.lblUnit1DSigma.setStyleSheet(new_font) |
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57 | |
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58 | # by default Spectrum label and cbCustomSpectrum are not visible |
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59 | self.cbCustomSpectrum.setVisible(False) |
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60 | self.lblSpectrum.setVisible(False) |
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61 | # self.onReset() |
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62 | |
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63 | # change index of comboboxes |
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64 | self.cbWaveColor.currentIndexChanged.connect(self.onSelectWaveColor) |
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65 | self.cbCustomSpectrum.currentIndexChanged.connect(self.onSelectCustomSpectrum) |
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66 | |
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67 | # push buttons |
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68 | self.cmdClose.clicked.connect(self.accept) |
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69 | self.cmdHelp.clicked.connect(self.onHelp) |
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70 | self.cmdCompute.clicked.connect(self.onCompute) |
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71 | self.cmdReset.clicked.connect(self.onReset) |
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72 | |
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73 | # input defaults |
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74 | self.qx = [] |
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75 | self.qy = [] |
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76 | # dQ defaults |
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77 | self.sigma_r = None |
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78 | self.sigma_phi = None |
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79 | self.sigma_1d = None |
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80 | |
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81 | # number of bins for wavelength and wavelength spread |
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82 | self.num_wave = 10 |
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83 | self.spectrum_dic = {} |
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84 | |
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85 | # dQ 2d image |
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86 | self.image = None |
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87 | # Source selection dic |
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88 | self.source_mass = _SOURCE_MASS |
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89 | # detector coordinate of estimation of sigmas |
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90 | self.det_coordinate = 'cartesian' |
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91 | |
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92 | self.resolution = ResolutionCalculator() |
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93 | self.spectrum_dic['Add new'] = '' |
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94 | self.spectrum_dic['Flat'] = self.resolution.get_default_spectrum() |
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95 | self.resolution.set_spectrum(self.spectrum_dic['Flat']) |
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96 | |
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97 | # validators |
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98 | self.txtWavelength.editingFinished.connect(self.checkWavelength) |
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99 | self.txtWavelengthSpread.editingFinished.connect(self.checkWavelengthSpread) |
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100 | |
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101 | self.txtDetectorPixSize.editingFinished.connect(self.checkPixels) |
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102 | self.txtDetectorSize.editingFinished.connect(self.checkPixels) |
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103 | |
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104 | self.txtSourceApertureSize.editingFinished.connect(self.checkAperture) |
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105 | self.txtSampleApertureSize.editingFinished.connect(self.checkAperture) |
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106 | |
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107 | self.txtQx.editingFinished.connect(self.checkQx_y) |
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108 | self.txtQy.editingFinished.connect(self.checkQx_y) |
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109 | |
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110 | # double validator |
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111 | self.txtSource2SampleDistance.setValidator(GuiUtils.DoubleValidator()) |
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112 | self.txtSample2DetectorDistance.setValidator(GuiUtils.DoubleValidator()) |
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113 | self.txtSampleOffset.setValidator(GuiUtils.DoubleValidator()) |
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114 | |
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115 | # call compute to calculate with default values |
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116 | self.createTemplate2DPlot() |
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117 | #self.onCompute() |
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118 | |
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119 | # ################################# |
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120 | # Validators: red background in line edits when wrong input |
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121 | # and display of info logging message |
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122 | # ################################# |
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123 | |
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124 | def checkWavelength(self): |
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125 | """ Validator for Wavelength |
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126 | if TOF, wavelength = min - max else only one number """ |
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127 | text_edit = self.txtWavelength # self.sender() |
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128 | if text_edit.isModified(): |
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129 | text_edit.setStyleSheet(BG_WHITE) |
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130 | input_string = str(text_edit.text()) |
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131 | if self.cbWaveColor.currentText() != 'TOF': |
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132 | input_wavelength = re.match('\d+\.?\d*', input_string) |
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133 | if input_wavelength is None: |
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134 | text_edit.setStyleSheet(BG_RED) |
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135 | self.cmdCompute.setEnabled(False) |
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136 | logging.info('Wavelength has to be a number.') |
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137 | else: |
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138 | text_edit.setStyleSheet(BG_WHITE) |
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139 | self.cmdCompute.setEnabled(True) |
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140 | else: |
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141 | interval_wavelength = re.match('^\d+\.?\d*\s*-\s*\d+\.?\d*$', |
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142 | input_string) |
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143 | |
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144 | if interval_wavelength is None: |
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145 | text_edit.setStyleSheet(BG_RED) |
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146 | self.cmdCompute.setEnabled(False) |
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147 | logging.info("Wavelength's input has to be an interval: " |
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148 | "min - max.") |
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149 | else: |
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150 | # check on min < max |
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151 | [wavelength_min, wavelength_max] = \ |
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152 | re.findall('\d+\.?\d*', interval_wavelength.group()) |
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153 | |
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154 | if float(wavelength_min) >= float(wavelength_max): |
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155 | text_edit.setStyleSheet(BG_RED) |
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156 | self.cmdCompute.setEnabled(False) |
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157 | logging.info("Wavelength: min must be smaller than max.") |
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158 | |
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159 | else: |
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160 | text_edit.setStyleSheet(BG_WHITE) |
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161 | self.cmdCompute.setEnabled(True) |
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162 | |
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163 | def checkWavelengthSpread(self): |
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164 | """ Validator for WavelengthSpread |
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165 | Input can be a 'number or min - max (; Number of bins)' """ |
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166 | text_edit = self.sender() |
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167 | |
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168 | if text_edit.isModified(): |
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169 | text_edit.setStyleSheet(BG_WHITE) |
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170 | if self.cbWaveColor.currentText() != 'TOF': |
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171 | pattern = '^\d+\.?\d*(|;\s*\d+)$' |
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172 | input_string = str(text_edit.text()) |
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173 | wavelength_spread_input = re.match(pattern, input_string) |
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174 | |
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175 | if wavelength_spread_input is None: |
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176 | text_edit.setStyleSheet(BG_RED) |
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177 | self.cmdCompute.setEnabled(False) |
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178 | logging.info('Wavelength spread has to be specified: ' |
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179 | 'single value or value; integer number of bins.') |
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180 | |
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181 | else: |
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182 | split_input = wavelength_spread_input.group().split(';') |
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183 | self.num_wave = split_input[1] if len(split_input) > 1 else 10 |
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184 | text_edit.setStyleSheet(BG_WHITE) |
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185 | self.cmdCompute.setEnabled(True) |
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186 | else: |
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187 | pattern = '^\d+\.?\d*\s*-\s*\d+\.?\d*(|;\s*\d+)$' |
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188 | input_string = str(text_edit.text()) |
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189 | wavelength_spread_input = re.match(pattern, input_string) |
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190 | |
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191 | if wavelength_spread_input is None: |
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192 | text_edit.setStyleSheet(BG_RED) |
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193 | self.cmdCompute.setEnabled(False) |
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194 | logging.info("Wavelength spread has to be specified: " |
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195 | "doublet separated by '-' with optional " |
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196 | "number of bins (given after ';'). " |
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197 | "For example, 0.1 - 0.1 (; 20).") |
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198 | |
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199 | else: |
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200 | split_input = wavelength_spread_input.group().split(';') |
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201 | self.num_wave = split_input[1] if len( |
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202 | split_input) > 1 else 10 |
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203 | text_edit.setStyleSheet(BG_WHITE) |
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204 | self.cmdCompute.setEnabled(True) |
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205 | |
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206 | def checkPixels(self): |
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207 | """ Validator for detector pixel size and number """ |
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208 | text_edit = self.sender() |
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209 | |
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210 | if text_edit.isModified(): |
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211 | text_edit.setStyleSheet(BG_WHITE) |
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212 | pattern = '^\d+\.?\d*,\s*\d+\.?\d*$' |
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213 | input_string = str(text_edit.text()) |
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214 | pixels_input = re.match(pattern, input_string) |
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215 | |
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216 | if pixels_input is None: |
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217 | text_edit.setStyleSheet(BG_RED) |
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218 | self.cmdCompute.setEnabled(False) |
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219 | logging.info('The input for the detector should contain 2 ' |
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220 | 'values separated by a comma.') |
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221 | |
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222 | else: |
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223 | text_edit.setStyleSheet(BG_WHITE) |
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224 | self.cmdCompute.setEnabled(True) |
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225 | |
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226 | def checkQx_y(self): |
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227 | """ Validator for qx and qy inputs """ |
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228 | Q_modified = [self.txtQx.isModified(), self.txtQy.isModified()] |
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229 | if any(Q_modified): |
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230 | pattern = '^-?\d+\.?\d*(,\s*-?\d+\.?\d*)*$' |
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231 | text_edit = self.txtQx if Q_modified[0] else self.txtQy |
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232 | input_string = str(text_edit.text()) |
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233 | q_input = re.match(pattern, input_string) |
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234 | if q_input is None: |
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235 | text_edit.setStyleSheet(BG_RED) |
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236 | self.cmdCompute.setEnabled(False) |
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237 | logging.info('Qx and Qy should contain one or more comma-separated numbers.') |
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238 | else: |
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239 | text_edit.setStyleSheet(BG_WHITE) |
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240 | self.cmdCompute.setEnabled(True) |
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241 | qx = str(self.txtQx.text()).split(',') |
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242 | qy = str(self.txtQy.text()).split(',') |
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243 | |
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244 | if len(qx) == 1 and len(qy) > 1: |
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245 | fill_qx = ', '.join([qx[0]] * len(qy)) |
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246 | self.txtQx.setText(fill_qx) |
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247 | |
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248 | elif len(qy) == 1 and len(qx) > 1: |
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249 | fill_qy = ', '.join([qy[0]] * len(qx)) |
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250 | self.txtQy.setText(fill_qy) |
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251 | |
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252 | elif len(qx) != len(qy): |
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253 | text_edit.setStyleSheet(BG_RED) |
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254 | self.cmdCompute.setEnabled(False) |
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255 | logging.info( |
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256 | 'Qx and Qy should have the same number of elements.') |
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257 | |
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258 | else: |
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259 | text_edit.setStyleSheet(BG_WHITE) |
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260 | self.cmdCompute.setEnabled(True) |
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261 | |
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262 | def checkAperture(self): |
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263 | """ Validator for Sample and Source apertures""" |
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264 | text_edit = self.sender() |
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265 | |
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266 | if text_edit.isModified(): |
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267 | text_edit.setStyleSheet(BG_WHITE) |
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268 | input_string = str(text_edit.text()) |
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269 | pattern = '^\d+\.?\d*(|,\s*\d+)$' |
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270 | aperture_input = re.match(pattern, input_string) |
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271 | |
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272 | if aperture_input is None: |
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273 | text_edit.setStyleSheet(BG_RED) |
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274 | self.cmdCompute.setEnabled(False) |
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275 | logging.info('A circular aperture is defined by a single ' |
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276 | 'value (diameter). A rectangular aperture is ' |
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277 | 'defined by 2 values separated by a comma.') |
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278 | |
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279 | else: |
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280 | text_edit.setStyleSheet(BG_WHITE) |
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281 | self.cmdCompute.setEnabled(True) |
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282 | |
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283 | # ################################# |
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284 | # Slots associated with signals from comboboxes |
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285 | # ################################# |
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286 | |
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287 | def onSelectWaveColor(self): |
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288 | """ Modify layout of GUI when TOF selected: add elements |
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289 | and modify default entry of Wavelength """ |
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290 | list_wdata = self.resolution.get_wave_list() |
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291 | min_lambda = min(list_wdata[0]) |
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292 | |
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293 | min_wspread = min(list_wdata[1]) |
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294 | max_wspread = max(list_wdata[1]) |
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295 | |
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296 | if self.cbWaveColor.currentText() == 'TOF': |
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297 | self.cbCustomSpectrum.setVisible(True) |
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298 | self.lblSpectrum.setVisible(True) |
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299 | # Get information about wavelength and spread |
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300 | |
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301 | if len(list_wdata[0]) < 2: |
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302 | max_lambda = 2 * min_lambda |
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303 | else: |
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304 | max_lambda = max(list_wdata[0]) |
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305 | self.txtWavelength.setText('{} - {}'.format(min_lambda, max_lambda)) |
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306 | self.txtWavelengthSpread.setText('{} - {}'.format(min_wspread, |
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307 | max_wspread)) |
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308 | |
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309 | else: |
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310 | self.cbCustomSpectrum.setVisible(False) |
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311 | self.lblSpectrum.setVisible(False) |
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312 | # modify Wavelength line edit only if set for TOF (2 elements) |
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313 | |
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314 | if len(self.txtWavelength.text().split('-')) >= 2: |
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315 | self.txtWavelength.setText(str(min_lambda)) |
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316 | self.txtWavelengthSpread.setText(str(min_wspread)) |
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317 | |
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318 | def onSelectCustomSpectrum(self): |
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319 | """ On Spectrum Combobox event""" |
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320 | if self.cbCustomSpectrum.currentText() == 'Add New': |
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321 | datafile = QtWidgets.QFileDialog.getOpenFileName( |
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322 | self, "Choose a spectral distribution file","", |
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323 | "All files (*.*)", None, |
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324 | QtWidgets.QFileDialog.DontUseNativeDialog)[0] |
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325 | |
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326 | if datafile is None or str(datafile) == '': |
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327 | logging.info("No spectral distribution data chosen.") |
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328 | self.cbCustomSpectrum.setCurrentIndex(0) |
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329 | self.resolution.set_spectrum(self.spectrum_dic['Flat']) |
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330 | return |
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331 | |
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332 | basename = os.path.basename(datafile) |
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333 | |
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334 | input_f = open(datafile, 'r') |
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335 | buff = input_f.read() |
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336 | lines = buff.split('\n') |
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337 | |
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338 | wavelength = [] |
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339 | intensity = [] |
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340 | |
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341 | for line in lines: |
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342 | toks = line.split() |
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343 | try: |
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344 | wave = float(toks[0]) |
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345 | intens = float(toks[1]) |
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346 | wavelength.append(wave) |
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347 | intensity.append(intens) |
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348 | except: |
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349 | logging.info('Could not extract values from file') |
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350 | if wavelength and intensity: |
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351 | if basename not in list(self.spectrum_dic.keys()): |
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352 | self.cbCustomSpectrum.addItem(basename) |
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353 | self.spectrum_dic[basename] = [wavelength, intensity] |
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354 | self.resolution.set_spectrum(self.spectrum_dic[basename]) |
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355 | return |
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356 | |
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357 | # ################################# |
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358 | # Slots associated with signals from push buttons |
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359 | # ################################# |
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360 | |
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361 | def onHelp(self): |
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362 | """ |
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363 | Bring up the Resolution Calculator Documentation whenever |
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364 | the HELP button is clicked. |
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365 | Calls Documentation Window with the path of the location within the |
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366 | documentation tree (after /doc/ ....". |
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367 | """ |
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368 | location = "/user/qtgui/Calculators/resolution_calculator_help.html" |
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369 | self.manager.showHelp(location) |
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370 | |
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371 | def onReset(self): |
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372 | # by default Spectrum label and cbCustomSpectrum are not visible |
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373 | self.cbCustomSpectrum.setVisible(False) |
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374 | self.lblSpectrum.setVisible(False) |
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375 | # Comboboxes |
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376 | self.cbCustomSpectrum.setCurrentIndex([self.cbCustomSpectrum.itemText(i) |
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377 | for i in range(self.cbCustomSpectrum.count())].index('Flat')) |
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378 | self.cbSource.setCurrentIndex([self.cbSource.itemText(i) for i in |
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379 | range(self.cbSource.count())].index('Neutron')) |
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380 | self.cbWaveColor.setCurrentIndex([self.cbWaveColor.itemText(i) for i |
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381 | in range(self.cbWaveColor.count())].index('Monochromatic')) |
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382 | # LineEdits |
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383 | self.txtDetectorPixSize.setText('0.5, 0.5') |
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384 | self.txtDetectorSize.setText('128, 128') |
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385 | self.txtSample2DetectorDistance.setText('1000') |
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386 | self.txtSampleApertureSize.setText('1.27') |
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387 | self.txtSampleOffset.setText('0') |
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388 | self.txtSource2SampleDistance.setText('1627') |
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389 | self.txtSourceApertureSize.setText('3.81') |
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390 | self.txtWavelength.setText('6.0') |
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391 | self.txtWavelengthSpread.setText('0.125') |
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392 | self.txtQx.setText('0.0') |
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393 | self.txtQy.setText('0.0') |
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394 | self.txt1DSigma.setText('0.0008289') |
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395 | self.txtSigma_x.setText('0.0008288') |
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396 | self.txtSigma_y.setText('0.0008288') |
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397 | self.txtSigma_lamd.setText('3.168e-05') |
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398 | |
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399 | self.image = None |
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400 | self.source_mass = _SOURCE_MASS |
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401 | self.det_coordinate = 'cartesian' |
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402 | self.num_wave = 10 |
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403 | self.spectrum_dic = {} |
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404 | self.spectrum_dic['Add new'] = '' |
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405 | self.spectrum_dic['Flat'] = self.resolution.get_default_spectrum() |
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406 | self.resolution.set_spectrum(self.spectrum_dic['Flat']) |
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407 | # Reset plot |
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408 | self.onCompute() |
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409 | |
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410 | # TODO Keep legacy validators?? |
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411 | def onCompute(self): |
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412 | """ |
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413 | Execute the computation of resolution |
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414 | """ |
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415 | # Q min max list default |
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416 | qx_min = [] |
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417 | qx_max = [] |
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418 | qy_min = [] |
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419 | qy_max = [] |
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420 | # possible max qrange |
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421 | self.resolution.qxmin_limit = 0 |
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422 | self.resolution.qxmax_limit = 0 |
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423 | self.resolution.qymin_limit = 0 |
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424 | self.resolution.qymax_limit = 0 |
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425 | |
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426 | try: |
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427 | # Get all the values to compute |
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428 | wavelength = self._str2longlist(self.txtWavelength.text()) |
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429 | |
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430 | source = self.cbSource.currentText() |
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431 | mass = self.source_mass[str(source)] |
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432 | self.resolution.set_neutron_mass(float(mass)) |
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433 | |
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434 | wavelength_spread = self._str2longlist(\ |
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435 | self.txtWavelengthSpread.text().split(';')[0]) |
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436 | # Validate the wave inputs |
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437 | wave_input = self._validate_q_input(wavelength, wavelength_spread) |
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438 | if wave_input is not None: |
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439 | wavelength, wavelength_spread = wave_input |
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440 | |
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441 | self.resolution.set_wave(wavelength) |
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442 | self.resolution.set_wave_spread(wavelength_spread) |
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443 | |
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444 | # use legacy validator for correct input assignment |
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445 | |
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446 | source_aperture_size = self.txtSourceApertureSize.text() |
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447 | source_aperture_size = self._str2longlist(source_aperture_size) |
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448 | self.resolution.set_source_aperture_size(source_aperture_size) |
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449 | |
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450 | sample_aperture_size = self.txtSampleApertureSize.text() |
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451 | sample_aperture_size = self._string2list(sample_aperture_size) |
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452 | self.resolution.set_sample_aperture_size(sample_aperture_size) |
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453 | |
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454 | source2sample_distance = self.txtSource2SampleDistance.text() |
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455 | source2sample_distance = self._string2list(source2sample_distance) |
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456 | self.resolution.set_source2sample_distance(source2sample_distance) |
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457 | |
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458 | sample2sample_distance = self.txtSampleOffset.text() |
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459 | sample2sample_distance = self._string2list(sample2sample_distance) |
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460 | self.resolution.set_sample2sample_distance(sample2sample_distance) |
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461 | |
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462 | sample2detector_distance = self.txtSample2DetectorDistance.text() |
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463 | sample2detector_distance = self._string2list( |
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464 | sample2detector_distance) |
---|
465 | self.resolution.set_sample2detector_distance( |
---|
466 | sample2detector_distance) |
---|
467 | |
---|
468 | detector_size = self.txtDetectorSize.text() |
---|
469 | det_size = self._string2list(detector_size) |
---|
470 | # detector sizes must be ints. recast. |
---|
471 | detector_size = [int(i) for i in det_size] |
---|
472 | self.resolution.set_detector_size(detector_size) |
---|
473 | |
---|
474 | detector_pix_size = self.txtDetectorPixSize.text() |
---|
475 | detector_pix_size = self._string2list(detector_pix_size) |
---|
476 | self.resolution.set_detector_pix_size(detector_pix_size) |
---|
477 | |
---|
478 | self.qx = self._string2inputlist(self.txtQx.text()) |
---|
479 | self.qy = self._string2inputlist(self.txtQy.text()) |
---|
480 | |
---|
481 | # Find min max of qs |
---|
482 | xmin = min(self.qx) |
---|
483 | xmax = max(self.qx) |
---|
484 | ymin = min(self.qy) |
---|
485 | ymax = max(self.qy) |
---|
486 | if not self._validate_q_input(self.qx, self.qy): |
---|
487 | raise ValueError("Invalid Q input") |
---|
488 | except: |
---|
489 | msg = "An error occurred during the resolution computation." |
---|
490 | msg += "Please check your inputs..." |
---|
491 | logging.warning(msg) |
---|
492 | return |
---|
493 | |
---|
494 | # Validate the q inputs |
---|
495 | q_input = self._validate_q_input(self.qx, self.qy) |
---|
496 | if q_input is not None: |
---|
497 | self.qx, self.qy = q_input |
---|
498 | |
---|
499 | # Make list of q min max for mapping |
---|
500 | for i in range(len(self.qx)): |
---|
501 | qx_min.append(xmin) |
---|
502 | qx_max.append(xmax) |
---|
503 | for i in range(len(self.qy)): |
---|
504 | qy_min.append(ymin) |
---|
505 | qy_max.append(ymax) |
---|
506 | |
---|
507 | # Compute the resolution |
---|
508 | if self.image is not None: |
---|
509 | self.resolution.reset_image() |
---|
510 | |
---|
511 | # Compute and get the image plot |
---|
512 | try: |
---|
513 | cal_res = threads.deferToThread(self.map_wrapper, |
---|
514 | self.calc_func, |
---|
515 | self.qx, |
---|
516 | self.qy, |
---|
517 | qx_min, |
---|
518 | qx_max, |
---|
519 | qy_min, qy_max) |
---|
520 | |
---|
521 | cal_res.addCallback(self.complete) |
---|
522 | cal_res.addErrback(self.calculateFailed) |
---|
523 | |
---|
524 | self.cmdCompute.setText('Wait...') |
---|
525 | self.cmdCompute.setEnabled(False) |
---|
526 | except: |
---|
527 | raise |
---|
528 | |
---|
529 | def calculateFailed(self, reason): |
---|
530 | self.cmdCompute.setText('Compute') |
---|
531 | self.cmdCompute.setEnabled(True) |
---|
532 | logging.error(str(reason)) |
---|
533 | |
---|
534 | def complete(self, image): |
---|
535 | """ |
---|
536 | Complete computation |
---|
537 | """ |
---|
538 | self.image = image |
---|
539 | |
---|
540 | # Get and format the sigmas |
---|
541 | sigma_r = self.formatNumber(self.resolution.sigma_1) |
---|
542 | sigma_phi = self.formatNumber(self.resolution.sigma_2) |
---|
543 | sigma_lamd = self.formatNumber(self.resolution.sigma_lamd) |
---|
544 | sigma_1d = self.formatNumber(self.resolution.sigma_1d) |
---|
545 | |
---|
546 | # Set output values |
---|
547 | self.txtSigma_x.setText(str(sigma_r)) |
---|
548 | self.txtSigma_y.setText(str(sigma_phi)) |
---|
549 | self.txtSigma_lamd.setText(str(sigma_lamd)) |
---|
550 | self.txt1DSigma.setText(str(sigma_1d)) |
---|
551 | |
---|
552 | self.cmdCompute.setText('Compute') |
---|
553 | self.cmdCompute.setEnabled(True) |
---|
554 | |
---|
555 | self.new2DPlot() |
---|
556 | |
---|
557 | return |
---|
558 | |
---|
559 | def map_wrapper(self, func, qx, qy, qx_min, qx_max, qy_min, qy_max): |
---|
560 | """ |
---|
561 | Prepare the Mapping for the computation |
---|
562 | : params qx, qy, qx_min, qx_max, qy_min, qy_max: |
---|
563 | : return: image (numpy array) |
---|
564 | """ |
---|
565 | image = list(map(func, qx, qy, |
---|
566 | qx_min, qx_max, |
---|
567 | qy_min, qy_max))[0] |
---|
568 | |
---|
569 | return image |
---|
570 | |
---|
571 | def calc_func(self, qx, qy, qx_min, qx_max, qy_min, qy_max): |
---|
572 | """ |
---|
573 | Perform the calculation for a given set of Q values. |
---|
574 | : return: image (numpy array) |
---|
575 | """ |
---|
576 | try: |
---|
577 | qx_value = float(qx) |
---|
578 | qy_value = float(qy) |
---|
579 | except : |
---|
580 | raise ValueError |
---|
581 | |
---|
582 | # calculate 2D resolution distribution image |
---|
583 | image = self.resolution.compute_and_plot(qx_value, qy_value, |
---|
584 | qx_min, qx_max, qy_min, |
---|
585 | qy_max, |
---|
586 | self.det_coordinate) |
---|
587 | return image |
---|
588 | |
---|
589 | # ################################# |
---|
590 | # Legacy validators |
---|
591 | # ################################# |
---|
592 | def _string2list(self, input_string): |
---|
593 | """ |
---|
594 | Change NNN, NNN to list,ie. [NNN, NNN] where NNN is a number |
---|
595 | """ |
---|
596 | new_numbers_list = [] |
---|
597 | # check the number of floats |
---|
598 | try: |
---|
599 | strg = float(input_string) |
---|
600 | new_numbers_list.append(strg) |
---|
601 | except: |
---|
602 | string_split = input_string.split(',') |
---|
603 | if len(string_split) == 1 or len(string_split) == 2: |
---|
604 | new_numbers_list = [float(item) for item in string_split] |
---|
605 | else: |
---|
606 | msg = "The numbers must be one or two (separated by ',')" |
---|
607 | logging.info(msg) |
---|
608 | raise RuntimeError(msg) |
---|
609 | |
---|
610 | return new_numbers_list |
---|
611 | |
---|
612 | def _string2inputlist(self, input_string): |
---|
613 | """ |
---|
614 | Change NNN, NNN,... to list,ie. [NNN, NNN,...] where NNN is a number |
---|
615 | : return new_list: string like list |
---|
616 | """ |
---|
617 | new_list = [] |
---|
618 | string_split = input_string.split(',') |
---|
619 | try: |
---|
620 | new_list = [float(t) for t in string_split] |
---|
621 | except: |
---|
622 | logging.error(sys.exc_info()[1]) |
---|
623 | return new_list |
---|
624 | |
---|
625 | def _str2longlist(self, input_string): |
---|
626 | """ |
---|
627 | Change NNN, NNN,... to list, NNN - NNN ; NNN to list, or float to list |
---|
628 | : return new_string: string like list |
---|
629 | """ |
---|
630 | try: |
---|
631 | # is float |
---|
632 | out = [float(input_string)] |
---|
633 | return out |
---|
634 | except: |
---|
635 | if self.cbWaveColor.currentText() == 'Monochromatic': |
---|
636 | logging.warning("Wrong format of inputs.") |
---|
637 | else: |
---|
638 | try: |
---|
639 | # has a '-' |
---|
640 | if input_string.count('-') > 0: |
---|
641 | value = input_string.split('-') |
---|
642 | if value[1].count(';') > 0: |
---|
643 | # has a ';' |
---|
644 | last_list = value[1].split(';') |
---|
645 | num = numpy.ceil(float(last_list[1])) |
---|
646 | max_value = float(last_list[0]) |
---|
647 | self.num_wave = num |
---|
648 | else: |
---|
649 | # default num |
---|
650 | num = self.num_wave |
---|
651 | max_value = float(value[1]) |
---|
652 | min_value = float(value[0]) |
---|
653 | # make a list |
---|
654 | bin_size = numpy.fabs(max_value - min_value) / (num - 1) |
---|
655 | out = [min_value + bin_size * bnum for bnum in |
---|
656 | range(num)] |
---|
657 | return out |
---|
658 | if input_string.count(',') > 0: |
---|
659 | out = self._string2inputlist(input_string) |
---|
660 | return out |
---|
661 | except: |
---|
662 | logging.error(sys.exc_info()[1]) |
---|
663 | |
---|
664 | def _validate_q_input(self, qx, qy): |
---|
665 | """ |
---|
666 | Check if q inputs are valid |
---|
667 | : params qx: qx as a list |
---|
668 | : params qy: qy as a list |
---|
669 | : return: True/False |
---|
670 | """ |
---|
671 | # check qualifications |
---|
672 | if qx.__class__.__name__ != 'list': |
---|
673 | return None |
---|
674 | if qy.__class__.__name__ != 'list': |
---|
675 | return None |
---|
676 | if len(qx) < 1: |
---|
677 | return None |
---|
678 | if len(qy) < 1: |
---|
679 | return None |
---|
680 | # allow one input |
---|
681 | if len(qx) == 1 and len(qy) > 1: |
---|
682 | qx = [qx[0] for ind in range(len(qy))] |
---|
683 | |
---|
684 | if len(qy) == 1 and len(qx) > 1: |
---|
685 | qy = [qy[0] for ind in range(len(qx))] |
---|
686 | # check length |
---|
687 | if len(qx) != len(qy): |
---|
688 | return None |
---|
689 | if qx is None or qy is None: |
---|
690 | return None |
---|
691 | return qx, qy |
---|
692 | |
---|
693 | def formatNumber(self, value=None): |
---|
694 | """ |
---|
695 | Return a float in a standardized, human-readable formatted string |
---|
696 | """ |
---|
697 | try: |
---|
698 | value = float(value) |
---|
699 | except: |
---|
700 | output = None |
---|
701 | return output |
---|
702 | |
---|
703 | output = "%-7.4g" % value |
---|
704 | return output.lstrip().rstrip() |
---|
705 | |
---|
706 | # ################################# |
---|
707 | # Plot |
---|
708 | # ################################# |
---|
709 | |
---|
710 | def createTemplate2DPlot(self): |
---|
711 | """ |
---|
712 | Create a template for 2D data |
---|
713 | """ |
---|
714 | self.plotter = Plotter2DWidget(self, manager=self.manager, quickplot=True) |
---|
715 | self.plotter.scale = 'linear' |
---|
716 | self.plotter.cmap = None |
---|
717 | layout = QtWidgets.QHBoxLayout() |
---|
718 | layout.setContentsMargins(0, 0, 0, 0) |
---|
719 | self.graphicsView.setLayout(layout) |
---|
720 | layout.addWidget(self.plotter) |
---|
721 | |
---|
722 | def new2DPlot(self): |
---|
723 | """ |
---|
724 | Create a new 2D data instance based on computing results |
---|
725 | """ |
---|
726 | qx_min, qx_max, qy_min, qy_max = self.resolution.get_detector_qrange() |
---|
727 | |
---|
728 | dx_size = (qx_max - qx_min) / (1000 - 1) |
---|
729 | dy_size = (qy_max - qy_min) / (1000 - 1) |
---|
730 | x_val = numpy.arange(qx_min, qx_max, dx_size) |
---|
731 | y_val = numpy.arange(qy_max, qy_min, -dy_size) |
---|
732 | |
---|
733 | if len(self.plotter.ax.patches): |
---|
734 | self.plotter.ax.patches[0].remove() |
---|
735 | |
---|
736 | self.drawLines() |
---|
737 | |
---|
738 | self.plotter.data = Data2D(image=self.image, |
---|
739 | qx_data=x_val, |
---|
740 | qy_data=y_val, |
---|
741 | xmin=qx_min, xmax=qx_max, |
---|
742 | ymin=qy_min, ymax=qy_max) |
---|
743 | |
---|
744 | self.plotter.plot() |
---|
745 | self.plotter.show() |
---|
746 | self.plotter.update() |
---|
747 | |
---|
748 | def drawLines(self): |
---|
749 | """ |
---|
750 | Draw lines in image if applicable |
---|
751 | """ |
---|
752 | wave_list, _ = self.resolution.get_wave_list() |
---|
753 | if len(wave_list) > 1 and wave_list[-1] == max(wave_list): |
---|
754 | color = 'g' |
---|
755 | # draw a green rectangle(limit for the longest wavelength |
---|
756 | # to be involved) for tof inputs |
---|
757 | # Get the params from resolution |
---|
758 | # plotting range for largest wavelength |
---|
759 | qx_min = self.resolution.qx_min |
---|
760 | qx_max = self.resolution.qx_max |
---|
761 | qy_min = self.resolution.qy_min |
---|
762 | qy_max = self.resolution.qy_max |
---|
763 | # detector range |
---|
764 | detector_qx_min = self.resolution.detector_qx_min |
---|
765 | detector_qx_max = self.resolution.detector_qx_max |
---|
766 | detector_qy_min = self.resolution.detector_qy_min |
---|
767 | detector_qy_max = self.resolution.detector_qy_max |
---|
768 | |
---|
769 | rect = patches.Rectangle((detector_qx_min + 0.0002, |
---|
770 | detector_qy_min + 0.0002), |
---|
771 | detector_qx_max - detector_qx_min, |
---|
772 | detector_qy_max - detector_qy_min, |
---|
773 | linewidth=2, |
---|
774 | edgecolor=color, facecolor='none') |
---|
775 | self.plotter.ax.add_patch(rect) |
---|
776 | else: |
---|
777 | qx_min, qx_max, qy_min, qy_max = self.resolution.get_detector_qrange() |
---|
778 | # detector range |
---|
779 | detector_qx_min = self.resolution.qxmin_limit |
---|
780 | detector_qx_max = self.resolution.qxmax_limit |
---|
781 | detector_qy_min = self.resolution.qymin_limit |
---|
782 | detector_qy_max = self.resolution.qymax_limit |
---|
783 | |
---|
784 | xmin = min(self.qx) |
---|
785 | xmax = max(self.qx) |
---|
786 | ymin = min(self.qy) |
---|
787 | ymax = max(self.qy) |
---|
788 | |
---|
789 | if xmin < detector_qx_min or xmax > detector_qx_max or \ |
---|
790 | ymin < detector_qy_min or ymax > detector_qy_max: |
---|
791 | # message |
---|
792 | msg = 'At least one q value located out side of\n' |
---|
793 | msg += " the detector range (%s < qx < %s, %s < qy < %s),\n" % \ |
---|
794 | (self.formatNumber(detector_qx_min), |
---|
795 | self.formatNumber(detector_qx_max), |
---|
796 | self.formatNumber(detector_qy_min), |
---|
797 | self.formatNumber(detector_qy_max)) |
---|
798 | msg += " is ignored in computation.\n" |
---|
799 | |
---|
800 | logging.warning(msg) |
---|
801 | |
---|
802 | # Draw zero axis lines. |
---|
803 | if qy_min < 0 <= qy_max: |
---|
804 | self.plotter.ax.axhline(linewidth=1) |
---|
805 | |
---|
806 | if qx_min < 0 <= qx_max: |
---|
807 | self.plotter.ax.axvline(linewidth=1) |
---|