Copy of models.py @ 243a8d4

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload

Last change on this file since 243a8d4 was a07e72f, checked in by Gervaise Alina <gervyh@…>, 14 years ago
remove other type of data into sansview
Property mode set to `100644`
File size: 21.6 KB

Line
1
2	import wx
3	import wx.lib.newevent
4	import imp
5	import os,sys,math
6	import os.path
7
8	(ModelEvent, EVT_MODEL) = wx.lib.newevent.NewEvent()
9	from sans.guiframe.events import StatusEvent
10	# Time is needed by the log method
11	import time
12
13	# Explicitly import from the pluginmodel module so that py2exe
14	# places it in the distribution. The Model1DPlugin class is used
15	# as the base class of plug-in models.
16	from sans.models.pluginmodel import Model1DPlugin
17
18	def log(message):
19	"""
20	"""
21	out = open("plugins.log", 'a')
22	out.write("%10g: %s\n" % (time.clock(), message))
23	out.close()
24
25	def findModels():
26	"""
27	"""
28	log("looking for models in: %s/plugins" % os.getcwd())
29	if os.path.isdir('plugins'):
30	return _findModels('plugins')
31	return []
32
33	def _check_plugin(model, name):
34	"""
35	Do some checking before model adding plugins in the list
36
37	:param model: class model to add into the plugin list
38	:param name:name of the module plugin
39
40	:return model: model if valid model or None if not valid
41
42	"""
43	#Check is the plugin is of type Model1DPlugin
44	if not issubclass(model, Model1DPlugin):
45	msg= "Plugin %s must be of type Model1DPlugin \n"%str(name)
46	log(msg)
47	return None
48	if model.__name__!="Model":
49	msg= "Plugin %s class name must be Model \n"%str(name)
50	log(msg)
51	return None
52	try:
53	new_instance= model()
54	except:
55	msg="Plugin %s error in __init__ \n\t: %s %s\n"%(str(name),
56	str(sys.exc_type),sys.exc_value)
57	log(msg)
58	return None
59
60	new_instance= model()
61	if hasattr(new_instance,"function"):
62	try:
63	value=new_instance.function()
64	except:
65	msg="Plugin %s: error writing function \n\t :%s %s\n "%(str(name),
66	str(sys.exc_type),sys.exc_value)
67	log(msg)
68	return None
69	else:
70	msg="Plugin %s needs a method called function \n"%str(name)
71	log(msg)
72	return None
73	return model
74
75
76	def _findModels(dir):
77	"""
78	"""
79	# List of plugin objects
80	plugins = []
81	# Go through files in plug-in directory
82	try:
83	list = os.listdir(dir)
84	for item in list:
85	toks = os.path.splitext(os.path.basename(item))
86	if toks[1]=='.py' and not toks[0]=='__init__':
87	name = toks[0]
88
89	path = [os.path.abspath(dir)]
90	file = None
91	try:
92	(file, path, info) = imp.find_module(name, path)
93	module = imp.load_module( name, file, item, info )
94	if hasattr(module, "Model"):
95	try:
96	if _check_plugin(module.Model, name)!=None:
97	plugins.append(module.Model)
98	except:
99	msg="Error accessing Model"
100	msg+="in %s\n %s %s\n" % (name,
101	str(sys.exc_type), sys.exc_value)
102	log(msg)
103	except:
104	msg="Error accessing Model"
105	msg +=" in %s\n %s %s \n" %(name,
106	str(sys.exc_type), sys.exc_value)
107	log(msg)
108	finally:
109
110	if not file==None:
111	file.close()
112	except:
113	# Don't deal with bad plug-in imports. Just skip.
114	pass
115	return plugins
116
117	class ModelList(object):
118	"""
119	Contains dictionary of model and their type
120	"""
121	def __init__(self):
122	"""
123	"""
124	self.mydict = {}
125
126	def set_list(self, name, mylist):
127	"""
128	:param name: the type of the list
129	:param mylist: the list to add
130
131	"""
132	if name not in self.mydict.keys():
133	self.mydict[name] = mylist
134
135
136	def get_list(self):
137	"""
138	return all the list stored in a dictionary object
139	"""
140	return self.mydict
141
142	class ModelManager:
143	"""
144	"""
145	## external dict for models
146	model_combobox = ModelList()
147	## Dictionary of form models
148	form_factor_dict = {}
149	## dictionary of other
150	struct_factor_dict = {}
151	##list of form factors
152	shape_list =[]
153	## independent shape model list
154	shape_indep_list = []
155	##list of structure factors
156	struct_list= []
157	##list of model allowing multiplication
158	multiplication_factor=[]
159	##list of multifunctional shapes
160	multi_func_list =[]
161	## list of added models
162	plugins=[]
163	## Event owner (guiframe)
164	event_owner = None
165
166	def _getModelList(self):
167	"""
168	List of models we want to make available by default
169	for this application
170
171	:return: the next free event ID following the new menu events
172
173	"""
174	from sans.models.SphereModel import SphereModel
175	self.shape_list.append(SphereModel)
176	self.multiplication_factor.append(SphereModel)
177
178	from sans.models.BinaryHSModel import BinaryHSModel
179	self.shape_list.append(BinaryHSModel)
180
181	from sans.models.FuzzySphereModel import FuzzySphereModel
182	self.shape_list.append(FuzzySphereModel)
183	self.multiplication_factor.append(FuzzySphereModel)
184
185	from sans.models.CoreShellModel import CoreShellModel
186	self.shape_list.append(CoreShellModel)
187	self.multiplication_factor.append(CoreShellModel)
188
189	from sans.models.CoreMultiShellModel import CoreMultiShellModel
190	self.shape_list.append(CoreMultiShellModel)
191	self.multiplication_factor.append(CoreMultiShellModel)
192	self.multi_func_list.append(CoreMultiShellModel)
193
194	from sans.models.VesicleModel import VesicleModel
195	self.shape_list.append(VesicleModel)
196	self.multiplication_factor.append(VesicleModel)
197
198	from sans.models.MultiShellModel import MultiShellModel
199	self.shape_list.append(MultiShellModel)
200	self.multiplication_factor.append(MultiShellModel)
201
202	from sans.models.OnionExpShellModel import OnionExpShellModel
203	self.shape_list.append(OnionExpShellModel)
204	self.multiplication_factor.append(OnionExpShellModel)
205	self.multi_func_list.append(OnionExpShellModel)
206
207	from sans.models.SphericalSLDModel import SphericalSLDModel
208	self.shape_list.append(SphericalSLDModel)
209	self.multiplication_factor.append(SphericalSLDModel)
210	self.multi_func_list.append(SphericalSLDModel)
211
212	from sans.models.CylinderModel import CylinderModel
213	self.shape_list.append(CylinderModel)
214	self.multiplication_factor.append(CylinderModel)
215
216	from sans.models.CoreShellCylinderModel import CoreShellCylinderModel
217	self.shape_list.append(CoreShellCylinderModel)
218	self.multiplication_factor.append(CoreShellCylinderModel)
219
220	from sans.models.HollowCylinderModel import HollowCylinderModel
221	self.shape_list.append(HollowCylinderModel)
222	self.multiplication_factor.append(HollowCylinderModel)
223
224	from sans.models.FlexibleCylinderModel import FlexibleCylinderModel
225	self.shape_list.append(FlexibleCylinderModel)
226
227	from sans.models.FlexCylEllipXModel import FlexCylEllipXModel
228	self.shape_list.append(FlexCylEllipXModel)
229
230	from sans.models.StackedDisksModel import StackedDisksModel
231	self.shape_list.append(StackedDisksModel)
232	self.multiplication_factor.append(StackedDisksModel)
233
234	from sans.models.ParallelepipedModel import ParallelepipedModel
235	self.shape_list.append(ParallelepipedModel)
236	self.multiplication_factor.append(ParallelepipedModel)
237
238	from sans.models.CSParallelepipedModel import CSParallelepipedModel
239	self.shape_list.append(CSParallelepipedModel)
240	self.multiplication_factor.append(CSParallelepipedModel)
241
242	from sans.models.EllipticalCylinderModel import EllipticalCylinderModel
243	self.shape_list.append(EllipticalCylinderModel)
244	self.multiplication_factor.append(EllipticalCylinderModel)
245
246	from sans.models.BarBellModel import BarBellModel
247	self.shape_list.append(BarBellModel)
248	# not implemeted yet!
249	#self.multiplication_factor.append(BarBellModel)
250
251	from sans.models.CappedCylinderModel import CappedCylinderModel
252	self.shape_list.append(CappedCylinderModel)
253	# not implemeted yet!
254	#self.multiplication_factor.append(CappedCylinderModel)
255
256	from sans.models.EllipsoidModel import EllipsoidModel
257	self.shape_list.append(EllipsoidModel)
258	self.multiplication_factor.append(EllipsoidModel)
259
260	from sans.models.CoreShellEllipsoidModel import CoreShellEllipsoidModel
261	self.shape_list.append(CoreShellEllipsoidModel)
262	self.multiplication_factor.append(CoreShellEllipsoidModel)
263
264	from sans.models.TriaxialEllipsoidModel import TriaxialEllipsoidModel
265	self.shape_list.append(TriaxialEllipsoidModel)
266	self.multiplication_factor.append(TriaxialEllipsoidModel)
267
268	from sans.models.LamellarModel import LamellarModel
269	self.shape_list.append(LamellarModel)
270
271	from sans.models.LamellarFFHGModel import LamellarFFHGModel
272	self.shape_list.append(LamellarFFHGModel)
273
274	from sans.models.LamellarPSModel import LamellarPSModel
275	self.shape_list.append(LamellarPSModel)
276
277	from sans.models.LamellarPSHGModel import LamellarPSHGModel
278	self.shape_list.append(LamellarPSHGModel)
279
280	from sans.models.LamellarPCrystalModel import LamellarPCrystalModel
281	self.shape_list.append(LamellarPCrystalModel)
282
283	from sans.models.SCCrystalModel import SCCrystalModel
284	self.shape_list.append(SCCrystalModel)
285
286	from sans.models.FCCrystalModel import FCCrystalModel
287	self.shape_list.append(FCCrystalModel)
288
289	from sans.models.BCCrystalModel import BCCrystalModel
290	self.shape_list.append(BCCrystalModel)
291
292	## Structure factor
293	from sans.models.SquareWellStructure import SquareWellStructure
294	self.struct_list.append(SquareWellStructure)
295
296	from sans.models.HardsphereStructure import HardsphereStructure
297	self.struct_list.append(HardsphereStructure)
298
299	from sans.models.StickyHSStructure import StickyHSStructure
300	self.struct_list.append(StickyHSStructure)
301
302	from sans.models.HayterMSAStructure import HayterMSAStructure
303	self.struct_list.append(HayterMSAStructure)
304
305	##shape-independent models
306	from sans.models.PowerLawAbsModel import PowerLawAbsModel
307	self.shape_indep_list.append( PowerLawAbsModel )
308
309	from sans.models.BEPolyelectrolyte import BEPolyelectrolyte
310	self.shape_indep_list.append(BEPolyelectrolyte )
311	self.form_factor_dict[str(wx.NewId())] = [SphereModel]
312
313	from sans.models.BroadPeakModel import BroadPeakModel
314	self.shape_indep_list.append(BroadPeakModel)
315
316	from sans.models.CorrLengthModel import CorrLengthModel
317	self.shape_indep_list.append(CorrLengthModel)
318
319	from sans.models.DABModel import DABModel
320	self.shape_indep_list.append(DABModel )
321
322	from sans.models.DebyeModel import DebyeModel
323	self.shape_indep_list.append(DebyeModel )
324
325	#FractalModel (a c-model)is now being used instead of FractalAbsModel.
326	from sans.models.FractalModel import FractalModel
327	self.shape_indep_list.append(FractalModel )
328
329	from sans.models.FractalCoreShellModel import FractalCoreShellModel
330	self.shape_indep_list.append(FractalCoreShellModel )
331
332	from sans.models.GaussLorentzGelModel import GaussLorentzGelModel
333	self.shape_indep_list.append(GaussLorentzGelModel)
334
335	from sans.models.GuinierModel import GuinierModel
336	self.shape_indep_list.append(GuinierModel )
337
338	from sans.models.GuinierPorodModel import GuinierPorodModel
339	self.shape_indep_list.append(GuinierPorodModel )
340
341	from sans.models.LorentzModel import LorentzModel
342	self.shape_indep_list.append( LorentzModel)
343
344	from sans.models.PeakGaussModel import PeakGaussModel
345	self.shape_indep_list.append(PeakGaussModel)
346
347	from sans.models.PeakLorentzModel import PeakLorentzModel
348	self.shape_indep_list.append(PeakLorentzModel)
349
350	from sans.models.Poly_GaussCoil import Poly_GaussCoil
351	self.shape_indep_list.append(Poly_GaussCoil)
352
353	from sans.models.PolymerExclVolume import PolymerExclVolume
354	self.shape_indep_list.append(PolymerExclVolume)
355
356	from sans.models.PorodModel import PorodModel
357	self.shape_indep_list.append(PorodModel )
358
359	from sans.models.RPA10Model import RPA10Model
360	self.shape_indep_list.append(RPA10Model)
361	self.multi_func_list.append(RPA10Model)
362
363	from sans.models.TeubnerStreyModel import TeubnerStreyModel
364	self.shape_indep_list.append(TeubnerStreyModel )
365
366	from sans.models.TwoLorentzianModel import TwoLorentzianModel
367	self.shape_indep_list.append(TwoLorentzianModel )
368
369	from sans.models.TwoPowerLawModel import TwoPowerLawModel
370	self.shape_indep_list.append(TwoPowerLawModel )
371
372	from sans.models.UnifiedPowerRgModel import UnifiedPowerRgModel
373	self.shape_indep_list.append(UnifiedPowerRgModel )
374	self.multi_func_list.append(UnifiedPowerRgModel)
375
376	from sans.models.LineModel import LineModel
377	self.shape_indep_list.append(LineModel)
378
379	from sans.models.ReflectivityModel import ReflectivityModel
380	self.multi_func_list.append(ReflectivityModel)
381
382	from sans.models.ReflectivityIIModel import ReflectivityIIModel
383	self.multi_func_list.append(ReflectivityIIModel)
384
385	#Looking for plugins
386	self.plugins = findModels()
387	self._get_multifunc_models()
388	self.plugins.append(ReflectivityModel)
389	self.plugins.append(ReflectivityIIModel)
390	return 0
391
392
393	def populate_menu(self, modelmenu, event_owner):
394	"""
395	Populate a menu with our models
396
397	:param id: first menu event ID to use when binding the menu events
398	:param modelmenu: wx.Menu object to populate
399	:param event_owner: wx object to bind the menu events to
400
401	:return: the next free event ID following the new menu events
402
403	"""
404	## Fill model lists
405	self._getModelList()
406	## store reference to model menu of guiframe
407	self.modelmenu = modelmenu
408	## guiframe reference
409	self.event_owner = event_owner
410
411	shape_submenu = wx.Menu()
412	shape_indep_submenu = wx.Menu()
413	structure_factor = wx.Menu()
414	added_models = wx.Menu()
415	multip_models = wx.Menu()
416	## create menu with shape
417	self._fill_simple_menu(menuinfo=["Shapes",shape_submenu," simple shape"],
418	list1=self.shape_list)
419
420	self._fill_simple_menu(menuinfo=["Shape-Independent",shape_indep_submenu,
421	"List of shape-independent models"],
422	list1=self.shape_indep_list )
423
424	self._fill_simple_menu(menuinfo=["Structure Factors",structure_factor,
425	"List of Structure factors models" ],
426	list1=self.struct_list)
427
428	self._fill_plugin_menu(menuinfo=["Customized Models", added_models,
429	"List of additional models"],
430	list1=self.plugins)
431
432	self._fill_menu(menuinfo=["P(Q)*S(Q)",multip_models,
433	"mulplication of 2 models"],
434	list1=self.multiplication_factor ,
435	list2= self.struct_list)
436	return 0
437
438	def _fill_plugin_menu(self, menuinfo, list1):
439	"""
440	fill the plugin menu with costumized models
441	"""
442	if len(list1)==0:
443	id = wx.NewId()
444	msg= "No model available check plugins.log for errors to fix problem"
445	menuinfo[1].Append(int(id),"Empty",msg)
446	self._fill_simple_menu( menuinfo,list1)
447
448	def _fill_simple_menu(self, menuinfo, list1):
449	"""
450	Fill the menu with list item
451
452	:param modelmenu: the menu to fill
453	:param menuinfo: submenu item for the first column of this modelmenu
454	with info.Should be a list :
455	[name(string) , menu(wx.menu), help(string)]
456	:param list1: contains item (form factor )to fill modelmenu second column
457
458	"""
459	if len(list1)>0:
460	self.model_combobox.set_list(menuinfo[0],list1)
461
462	for item in list1:
463	try:
464	id = wx.NewId()
465	struct_factor=item()
466	struct_name = struct_factor.__class__.__name__
467	if hasattr(struct_factor, "name"):
468	struct_name = struct_factor.name
469
470	menuinfo[1].Append(int(id),struct_name,struct_name)
471	if not item in self.struct_factor_dict.itervalues():
472	self.struct_factor_dict[str(id)]= item
473	wx.EVT_MENU(self.event_owner, int(id), self._on_model)
474	except:
475	msg= "Error Occured: %s"%sys.exc_value
476	wx.PostEvent(self.event_owner, StatusEvent(status=msg))
477
478	id = wx.NewId()
479	self.modelmenu.AppendMenu(id, menuinfo[0],menuinfo[1],menuinfo[2])
480
481	def _fill_menu(self, menuinfo, list1, list2):
482	"""
483	Fill the menu with list item
484
485	:param menuinfo: submenu item for the first column of this modelmenu
486	with info.Should be a list :
487	[name(string) , menu(wx.menu), help(string)]
488	:param list1: contains item (form factor )to fill modelmenu second column
489	:param list2: contains item (Structure factor )to fill modelmenu
490	third column
491
492	"""
493	if len(list1)>0:
494	self.model_combobox.set_list(menuinfo[0],list1)
495
496	for item in list1:
497	form_factor= item()
498	form_name = form_factor.__class__.__name__
499	if hasattr(form_factor, "name"):
500	form_name = form_factor.name
501	### store form factor to return to other users
502	newmenu= wx.Menu()
503	if len(list2)>0:
504	for model in list2:
505	id = wx.NewId()
506	struct_factor = model()
507	name = struct_factor.__class__.__name__
508	if hasattr(struct_factor, "name"):
509	name = struct_factor.name
510	newmenu.Append(id,name, name)
511	wx.EVT_MENU(self.event_owner, int(id), self._on_model)
512	## save form_fact and struct_fact
513	self.form_factor_dict[int(id)] = [form_factor,struct_factor]
514
515	form_id= wx.NewId()
516	menuinfo[1].AppendMenu(int(form_id), form_name,newmenu,menuinfo[2])
517	id=wx.NewId()
518	self.modelmenu.AppendMenu(id,menuinfo[0],menuinfo[1], menuinfo[2])
519
520	def _on_model(self, evt):
521	"""
522	React to a model menu event
523
524	:param event: wx menu event
525
526	"""
527	if int(evt.GetId()) in self.form_factor_dict.keys():
528	from sans.models.MultiplicationModel import MultiplicationModel
529	model1, model2 = self.form_factor_dict[int(evt.GetId())]
530	model = MultiplicationModel(model1, model2)
531	else:
532	model= self.struct_factor_dict[str(evt.GetId())]()
533	evt = ModelEvent(model=model)
534	wx.PostEvent(self.event_owner, evt)
535
536	def _get_multifunc_models(self):
537	"""
538	Get the multifunctional models
539	"""
540	for item in self.plugins:
541	try:
542	# check the multiplicity if any
543	if item.multiplicity_info[0] > 1:
544	self.multi_func_list.append(item)
545	except:
546	# pass to other items
547	pass
548
549	def get_model_list(self):
550	"""
551	return dictionary of models for fitpanel use
552
553	"""
554	self.model_combobox.set_list("multiplication", self.multiplication_factor)
555	self.model_combobox.set_list("Multi-Functions", self.multi_func_list)
556	return self.model_combobox
557
558
559
560
561
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SasView

source: sasview/sansview/perspectives/fitting/Copy of models.py @ 243a8d4

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