source: sasview/sansmodels/src/sans/models/ProlateModel.py @ 3b865c1

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload
Last change on this file since 3b865c1 was 9ce41c6, checked in by Gervaise Alina <gervyh@…>, 15 years ago

wrote unittest for all model untested , haven' test critial point error handling

  • Property mode set to 100644
File size: 4.7 KB
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1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\prolate.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CProlateModel
26import copy   
27   
28class ProlateModel(CProlateModel, BaseComponent):
29    """ Class that evaluates a ProlateModel model.
30        This file was auto-generated from ..\c_extensions\prolate.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         major_core      = 100.0 [A]
36         minor_core      = 50.0 [A]
37         major_shell     = 110.0 [A]
38         minor_shell     = 60.0 [A]
39         contrast        = 1e-006 [1/A²]
40         sld_solvent     = 6.3e-006 [1/A²]
41         background      = 0.001 [1/cm]
42
43    """
44       
45    def __init__(self):
46        """ Initialization """
47       
48        # Initialize BaseComponent first, then sphere
49        BaseComponent.__init__(self)
50        CProlateModel.__init__(self)
51       
52        ## Name of the model
53        self.name = "ProlateModel"
54        ## Model description
55        self.description ="""[ProlateCoreShellModel] Calculates the form factor for a prolate
56                ellipsoid particle with a core_shell structure.
57                The form factor is averaged over all possible
58                orientations of the ellipsoid such that P(q)
59                = scale*<f^2>/Vol + bkg, where f is the
60                single particle scattering amplitude.
61                [Parameters]:
62                major_core = radius of major_core,
63                minor_core = radius of minor_core,
64                major_shell = radius of major_shell,
65                minor_shell = radius of minor_shell,
66                contrast = SLD_core - SLD_shell
67                sld_solvent = SLD_solvent
68                background = Incoherent bkg
69                scale = scale
70                Note:It is the users' responsibility to ensure
71                that shell radii are larger than core radii."""
72       
73                ## Parameter details [units, min, max]
74        self.details = {}
75        self.details['scale'] = ['', None, None]
76        self.details['major_core'] = ['[A]', None, None]
77        self.details['minor_core'] = ['[A]', None, None]
78        self.details['major_shell'] = ['[A]', None, None]
79        self.details['minor_shell'] = ['[A]', None, None]
80        self.details['contrast'] = ['[1/A²]', None, None]
81        self.details['sld_solvent'] = ['[1/A²]', None, None]
82        self.details['background'] = ['[1/cm]', None, None]
83
84                ## fittable parameters
85        self.fixed=['major_core.width', 'minor_core.width', 'major_shell.width', 'minor_shell.width']
86       
87        ## parameters with orientation
88        self.orientation_params =[]
89   
90    def clone(self):
91        """ Return a identical copy of self """
92        return self._clone(ProlateModel())   
93   
94    def run(self, x = 0.0):
95        """ Evaluate the model
96            @param x: input q, or [q,phi]
97            @return: scattering function P(q)
98        """
99       
100        return CProlateModel.run(self, x)
101   
102    def runXY(self, x = 0.0):
103        """ Evaluate the model in cartesian coordinates
104            @param x: input q, or [qx, qy]
105            @return: scattering function P(q)
106        """
107       
108        return CProlateModel.runXY(self, x)
109       
110    def evalDistribition(self, x = []):
111        """ Evaluate the model in cartesian coordinates
112            @param x: input q[], or [qx[], qy[]]
113            @return: scattering function P(q[])
114        """
115        return CProlateModel.evalDistribition(self, x)
116       
117    def calculate_ER(self):
118        """ Calculate the effective radius for P(q)*S(q)
119            @param x: input q, or [q,phi]
120            @return: the value of the effective radius
121        """       
122        return CProlateModel.calculate_ER(self)
123       
124    def set_dispersion(self, parameter, dispersion):
125        """
126            Set the dispersion object for a model parameter
127            @param parameter: name of the parameter [string]
128            @dispersion: dispersion object of type DispersionModel
129        """
130        return CProlateModel.set_dispersion(self, parameter, dispersion.cdisp)
131       
132   
133# End of file
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