source: sasview/guiframe/data_loader.py @ ff54ce7

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload
Last change on this file since ff54ce7 was ff54ce7, checked in by Jae Cho <jhjcho@…>, 15 years ago

Working on tiff reader

  • Property mode set to 100644
File size: 7.3 KB
RevLine 
[6d920cd]1import os, sys,numpy
[de9483d]2import wx
[81812d9]3from dataFitting import Data1D, Theory1D
4from danse.common.plottools.plottables import Data2D
[c7bc3e7]5from DataLoader.loader import Loader
[58eac5d]6
[de9483d]7def choose_data_file(parent, location=None):
8    path = None
9    if location==None:
10        location = os.getcwd()
[c7bc3e7]11   
12    l = Loader()
13    cards = l.get_wildcards()
14    wlist = '|'.join(cards)
15   
16    dlg = wx.FileDialog(parent, "Choose a file", location, "", wlist, wx.OPEN)
[de9483d]17    if dlg.ShowModal() == wx.ID_OK:
18        path = dlg.GetPath()
19        mypath = os.path.basename(path)
20    dlg.Destroy()
21   
22    return path
23
24
25def load_ascii_1D(path):
26    """
27        Load a 1D ascii file, with errors
28    """
29    if path and os.path.isfile(path):
30   
[fc2b91a]31        file_x = numpy.zeros(0)
32        file_y = numpy.zeros(0)
33        file_dy = numpy.zeros(0)
[bc3dd65d]34        file_dx = numpy.zeros(0)
[de9483d]35       
36        input_f = open(path,'r')
37        buff = input_f.read()
38        lines = buff.split('\n')
[fc2b91a]39       
40        has_dy = False
[bc3dd65d]41        has_dx = False
[fc2b91a]42       
[de9483d]43        for line in lines:
44            try:
45                toks = line.split()
46                x = float(toks[0])
47                y = float(toks[1])
48                if len(toks)==3:
[fc2b91a]49                    has_dy = True
[bc3dd65d]50                    errdy = float(toks[2])
[de9483d]51                else:
[bc3dd65d]52                    errdy = 0.0
53                if len(toks)==4:
54                    has_dx = True
55                    errdx = float(toks[3])
56                else:
57                    errdx = 0.0
[fc2b91a]58                file_x  = numpy.append(file_x, x)
59                file_y  = numpy.append(file_y, y)
[bc3dd65d]60                file_dy = numpy.append(file_dy, dyerr)
61                file_dx = numpy.append(file_dx, dxerr)
[de9483d]62            except:
63                print "READ ERROR", line
64   
[fc2b91a]65        if has_dy==False:
66            file_dy = None
[bc3dd65d]67        if has_dx==False:
68            file_dx = None
[fc2b91a]69           
[bc3dd65d]70        return file_x, file_y, file_dy, file_dx
[fc2b91a]71    return None, None, None
72
[6d920cd]73def plot_data(parent, path):
74    """
75        Use the DataLoader loader to created data to plot.
76        @param path: the path of the data to load
77    """
[ccb560a]78    from sans.guicomm.events import NewPlotEvent, StatusEvent
[4102709]79    from DataLoader.loader import  Loader
[f2776f6]80   
[4102709]81    #Instantiate a loader
[81812d9]82    L = Loader()
[4102709]83   
84    #Recieves data
[ccb560a]85    try:
86        output=L.load(path)
[81812d9]87       
[ccb560a]88    except:
89        wx.PostEvent(parent, StatusEvent(status="Problem loading file: %s" % sys.exc_value))
90        return
[acb1ad1]91    filename = os.path.basename(path)
[cd84dca]92   
[81812d9]93    if not  output.__class__.__name__=="list":
[12aa9b5]94        ## smearing info
[81812d9]95        try:
[12aa9b5]96            dxl = output.dxl
97            dxw = output.dxw
[81812d9]98        except:
[12aa9b5]99            dxl = None
100            dxw = None
101        ## data 's name
102        if output.filename==None:
103            output.filename=str(filename)
[ecd74a1]104           
[12aa9b5]105        ## Creating a Data2D with output
[81812d9]106        if hasattr(output,'data'):
[a19cd4d]107            temp = output.err_data
108            temp[temp==0]=1
[12aa9b5]109            msg= "Loading 2D error bars of value 1 were added to"
110            wx.PostEvent(parent, StatusEvent(status=" %s %s"% (msg,output.filename)))
[a19cd4d]111            new_plot = Data2D(image=output.data,err_image=temp,
[81812d9]112                              xmin=output.xmin,xmax=output.xmax,
113                              ymin=output.ymin,ymax=output.ymax)
114            new_plot.x_bins=output.x_bins
115            new_plot.y_bins=output.y_bins
[ecd74a1]116           
117        ## Creating a pic image2D with output   
118        elif hasattr(output,'image'):
[ff54ce7]119            msg= "Note that RGB was modified to fit the SansView plot platform..."
[ecd74a1]120            wx.PostEvent(parent, StatusEvent(status=" %s %s"% (msg,output.filename)))
121            new_plot = Data2D(image=output.image,
122                              xmin=output.xmin,xmax=output.xmax,
123                              ymin=output.ymin,ymax=output.ymax, pictype = 'image')
124            new_plot.x_bins=output.x_bins
125            new_plot.y_bins=output.y_bins
[ff54ce7]126            #new_plot.scale = 'linear'
[12aa9b5]127        ##Creating Data1D with output
[81812d9]128        else:
[12aa9b5]129            ##dy values checked
[8bd764d]130            if output.dy ==None :
[81812d9]131                new_plot = Theory1D(output.x,output.y, dxl, dxw)
[12aa9b5]132               
[8bd764d]133            elif len(output.dy[output.dy==0])==len(output.dy):
134                output.dy[output.dy==0]=1 
[12aa9b5]135                msg="Loading 1D error bars of value 1 were added to "
136                wx.PostEvent(parent, StatusEvent(status= "%s %s"%(msg, output.filename)))
[8bd764d]137                new_plot = Theory1D(output.x,output.y,output.dy, dxl, dxw)
[81812d9]138            else:
[12aa9b5]139                msg="Loading 1D data: "
140                wx.PostEvent(parent, StatusEvent(status= "%s %s"%(msg, output.filename)))
141                new_plot = Data1D(x=output.x, y=output.y, dx=output.dx,
142                                  dy=output.dy, dxl=dxl, dxw=dxw)
143               
144        ## source will request in dataLoader .manipulation module
[81812d9]145        new_plot.source=output.source
[12aa9b5]146        ## name of the data allow to differentiate data when plotted
[35eeea8]147        name= output.filename
[f2776f6]148       
[35eeea8]149           
150        #print "data_name_list",data_name_list
151        new_plot.name = name
[12aa9b5]152        ## allow to highlight data when plotted
[81812d9]153        new_plot.interactive = True
[12aa9b5]154        ## when 2 data have the same id override the 1 st plotted
[35eeea8]155        new_plot.id = name
[12aa9b5]156        ## info is a reference to output of dataloader that can be used
157        ## to save  data 1D as cansas xml file
[81812d9]158        new_plot.info= output
[12aa9b5]159        ## detector used by dataLoader.manipulation module
[81812d9]160        new_plot.detector =output.detector
[12aa9b5]161        ## If the data file does not tell us what the axes are, just assume...
[81812d9]162        new_plot.xaxis(output._xaxis,output._xunit)
163        new_plot.yaxis(output._yaxis,output._yunit)
[12aa9b5]164        ##group_id specify on which panel to plot this data
[35eeea8]165        new_plot.group_id = name
[12aa9b5]166        ##post data to plot
[35eeea8]167        wx.PostEvent(parent, NewPlotEvent(plot=new_plot, title=str(name)))
[8bd764d]168       
[12aa9b5]169    ## the output of the loader is a list , some xml files contain more than one data
[81812d9]170    else:
[768656e]171        i=1
[81812d9]172        for item in output:
173            try:
[bc3dd65d]174                dx=item.dx
[81812d9]175                dxl=item.dxl
176                dxw=item.dxw
177            except:
[bc3dd65d]178                dx=None
[81812d9]179                dxl=None
180                dxw=None
[12aa9b5]181               
[7a7bf55]182            if item.dy ==None:
[81812d9]183                new_plot = Theory1D(item.x,item.y,dxl,dxw)
184            else:
[bc3dd65d]185                new_plot = Data1D(x=item.x,y=item.y,dx=dx,dy=item.dy,dxl=dxl,dxw=dxw)
[81812d9]186           
187            new_plot.source=item.source
[35eeea8]188           
189            name= str(item.run[0])
190           
191            new_plot.name = name
[81812d9]192            new_plot.interactive = True
193            new_plot.detector =item.detector
194            # If the data file does not tell us what the axes are, just assume...
195            new_plot.xaxis(item._xaxis,item._xunit)
196            new_plot.yaxis(item._yaxis,item._yunit)
[35eeea8]197            new_plot.group_id = name
198            new_plot.id = name
[6d920cd]199            new_plot.info= item
200           
[18eba35]201            if hasattr(item,"title"):
202                title= item.title
203            else:
[35eeea8]204                title= name
[18eba35]205            wx.PostEvent(parent, NewPlotEvent(plot=new_plot, title=str(title)))
[768656e]206            i+=1
[81812d9]207           
208           
Note: See TracBrowser for help on using the repository browser.