Changeset ca6659f in sasview


Ignore:
Timestamp:
Aug 10, 2016 7:05:32 AM (8 years ago)
Author:
lewis
Branches:
master, ESS_GUI, ESS_GUI_Docs, ESS_GUI_batch_fitting, ESS_GUI_bumps_abstraction, ESS_GUI_iss1116, ESS_GUI_iss879, ESS_GUI_iss959, ESS_GUI_opencl, ESS_GUI_ordering, ESS_GUI_sync_sascalc, costrafo411, magnetic_scatt, release-4.1.1, release-4.1.2, release-4.2.2, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, ticket885, unittest-saveload
Children:
9d17c1d
Parents:
ebc1407 (diff), c3e4e213 (diff)
Note: this is a merge changeset, the changes displayed below correspond to the merge itself.
Use the (diff) links above to see all the changes relative to each parent.
Message:

Merge branch 'master' into file-converter

Files:
17 added
7 edited

Legend:

Unmodified
Added
Removed

  • sasview/setup_exe.py

    r5552396 rc3e4e213  
    242242if os.path.isfile(f): 
    243243    data_files.append(('.', [f])) 
     244 
     245# atlas DLL required by matplotlib 11.1 
     246# ** REVISIT WHEN MOVING TO ANACONDA ** 
     247f = "c:\\python27\\lib\\site-packages\\numpy\\core\\numpy-atlas.dll" 
     248if os.path.isfile(f): 
     249    data_files.append(('.', [f])) 
    244250     
    245251if os.path.isfile("BUILD_NUMBER"): 
    … …  
    332338    # numpy 1.8 openmp bindings (still seems to use all the cores without them) 
    333339    #'libiomp5md.dll', 'libifcoremd.dll', 'libmmd.dll', 'svml_dispmd.dll','libifportMD.dll', 
     340    'numpy-atlas.dll', 
    334341    # microsoft C runtime (not allowed to ship with the app; need to ship vcredist 
    335342    'msvcp90.dll', 

  • .gitignore

    re04f87b rdf332d8  
    88# generated. 
    99# 
    10 # Feel free to add more stuff to this as and when it becomes an issue.  
     10# Feel free to add more stuff to this as and when it becomes an issue. 
    1111 
    1212.project 
    … …  
    5050/test/sasdataloader/test/plugins.zip 
    5151/test/sasdataloader/test/test_log.txt 
     52/test/sasdataloader/test/isis_1_0_write_test.xml 
     53/test/sasdataloader/test/isis_1_1_write_test.xml 
     54/test/sasdataloader/test/write_test.xml 
    5255 
    5356# autogenerated scripts 
    5457/sasview/installer.iss 
    55  

  • docs/sphinx-docs/source/user/tools.rst

    r8f46df7 reb8da5f  
    88 
    99   Data Operations Utility <sasgui/perspectives/calculator/data_operator_help> 
    10        
     10 
    1111   Density/Volume Calculator <sasgui/perspectives/calculator/density_calculator_help> 
    12     
     12 
    1313   Generic SANS Calculator <sasgui/perspectives/calculator/sas_calculator_help> 
    14     
     14 
    1515   Image Viewer <sasgui/perspectives/calculator/image_viewer_help> 
    16     
     16 
    1717   Kiessig Thickness Calculator <sasgui/perspectives/calculator/kiessig_calculator_help> 
    18     
     18 
    1919   SLD Calculator <sasgui/perspectives/calculator/sld_calculator_help> 
    20     
     20 
    2121   Slit Size Calculator <sasgui/perspectives/calculator/slit_calculator_help> 
    22     
     22 
    2323   Q Resolution Estimator <sasgui/perspectives/calculator/resolution_calculator_help> 
    24     
     24 
    2525   Python Shell <sasgui/perspectives/calculator/python_shell_help> 
    26     
     26 
     27   File Converter <sasgui/perspectives/file_converter/file_converter_help> 

  • run.py

    r832fea2 r18e7309  
    7272    platform = '%s-%s'%(get_platform(),sys.version[:3]) 
    7373    build_path = joinpath(root, 'build','lib.'+platform) 
    74      
    75     # Notify the help menu that the Sphinx documentation is in a different  
     74 
     75    # Notify the help menu that the Sphinx documentation is in a different 
    7676    # place than it otherwise would be. 
    7777    os.environ['SASVIEW_DOC_PATH'] = joinpath(build_path, "doc") 
    … …  
    123123    # Compiled modules need to be pulled from the build directory. 
    124124    # Some packages are not where they are needed, so load them explicitly. 
     125    import sas.sascalc.file_converter 
     126    sas.sascalc.file_converter.core = import_package('sas.sascalc.file_converter.core', 
     127                                  joinpath(build_path, 'sas', 'sascalc', 'file_converter', 'core'))                     
     128 
     129    # Compiled modules need to be pulled from the build directory. 
     130    # Some packages are not where they are needed, so load them explicitly. 
    125131    import sas.sascalc.calculator 
    126132    sas.sascalc.calculator.core = import_package('sas.sascalc.calculator.core', 

  • sasview/sasview.py

    r1be5202 r77d92cd  
    8181#Always use private .matplotlib setup to avoid conflicts with other 
    8282#uses of matplotlib 
    83 #Have to check if .sasview exists first  
     83#Have to check if .sasview exists first 
    8484sasdir = os.path.join(os.path.expanduser("~"),'.sasview') 
    8585if not os.path.exists(sasdir): 
    … …  
    119119        # Fitting perspective 
    120120        try: 
    121             import sas.sasgui.perspectives.fitting as module     
     121            import sas.sasgui.perspectives.fitting as module 
    122122            fitting_plug = module.Plugin() 
    123123            self.gui.add_perspective(fitting_plug) 
    … …  
    145145            logging.error(traceback.format_exc()) 
    146146 
    147         #Calculator perspective    
     147        #Calculator perspective 
    148148        try: 
    149149            import sas.sasgui.perspectives.calculator as module 
    … …  
    152152        except: 
    153153            logging.error("%s: could not find Calculator plug-in module"% \ 
     154                                                        APP_NAME) 
     155            logging.error(traceback.format_exc()) 
     156 
     157        # File converter tool 
     158        try: 
     159            import sas.sasgui.perspectives.file_converter as module 
     160            converter_plug = module.Plugin() 
     161            self.gui.add_perspective(converter_plug) 
     162        except: 
     163            logging.error("%s: could not find File Converter plug-in module"% \ 
    154164                                                        APP_NAME) 
    155165            logging.error(traceback.format_exc()) 
    … …  
    191201if __name__ == "__main__": 
    192202    run() 
    193  

  • setup.py

    rdb74ee8 r18e7309  
    99from distutils.command.build_ext import build_ext 
    1010from distutils.core import Command 
     11import numpy 
    1112 
    1213# Manage version number ###################################### 
    … …  
    5455        print "Removing existing build directory", SASVIEW_BUILD, "for a clean build" 
    5556        shutil.rmtree(SASVIEW_BUILD) 
    56                      
     57 
    5758# 'sys.maxsize' and 64bit: Not supported for python2.5 
    5859is_64bits = False 
    5960if sys.version_info >= (2, 6): 
    6061    is_64bits = sys.maxsize > 2**32 
    61      
     62 
    6263enable_openmp = False 
    6364 
    … …  
    118119        c = self.compiler.compiler_type 
    119120        print "Compiling with %s (64bit=%s)" % (c, str(is_64bits)) 
    120          
     121 
    121122        # OpenMP build options 
    122123        if enable_openmp: 
    … …  
    127128                for e in self.extensions: 
    128129                    e.extra_link_args = lopt[ c ] 
    129                      
     130 
    130131        # Platform-specific build options 
    131132        if platform_lopt.has_key(c): 
    … …  
    205206) 
    206207 
    207      
     208 
    208209# sas.sascalc.pr 
    209210srcdir  = os.path.join("src", "sas", "sascalc", "pr", "c_extensions") 
    … …  
    217218                              include_dirs=[], 
    218219                              ) ) 
    219          
     220 
     221# sas.sascalc.file_converter 
     222mydir = os.path.join("src", "sas", "sascalc", "file_converter", "c_ext") 
     223package_dir["sas.sascalc.file_converter.core"] = mydir 
     224package_dir["sas.sascalc.file_converter"] = os.path.join("src","sas", "sascalc", "file_converter") 
     225packages.extend(["sas.sascalc.file_converter","sas.sascalc.file_converter.core"]) 
     226ext_modules.append( Extension("sas.sascalc.file_converter.core.bsl_loader", 
     227                              sources = [os.path.join(mydir, "bsl_loader.c")], 
     228                              include_dirs=[numpy.get_include()], 
     229                              ) ) 
     230 
    220231# sas.sascalc.fit 
    221232package_dir["sas.sascalc.fit"] = os.path.join("src", "sas", "sascalc", "fit") 
    … …  
    239250packages.extend(["sas.sasgui.perspectives", "sas.sasgui.perspectives.calculator"]) 
    240251package_data['sas.sasgui.perspectives.calculator'] = ['images/*', 'media/*'] 
    241      
     252 
    242253# Data util 
    243254package_dir["sas.sascalc.data_util"] = os.path.join("src", "sas", "sascalc", "data_util") 
    … …  
    294305                               'test/2d_data/*', 
    295306                               'test/save_states/*', 
    296                                'test/upcoming_formats/*',  
     307                               'test/upcoming_formats/*', 
    297308                                 'default_categories.json'] 
    298309packages.append("sas.sasview") 
    … …  
    316327    required.extend(['pillow']) 
    317328 
    318 # Set up SasView     
     329# Set up SasView 
    319330setup( 
    320331    name="sasview", 
    … …  
    341352                'docs': BuildSphinxCommand, 
    342353                'disable_openmp': DisableOpenMPCommand} 
    343     )    
     354    ) 

  • src/sas/sascalc/dataloader/readers/cansas_reader.py

    r83b6408 rfcba29a  
    957957            written = written | self.write_node(pix, "z", item.pixel_size.z, 
    958958                                                {"unit": item.pixel_size_unit}) 
    959             written = written | self.write_node(det, "slit_length", 
    960                                                 item.slit_length, 
    961                                                 {"unit": item.slit_length_unit}) 
    962959            if written == True: 
    963960                self.append(pix, det) 
     961            self.write_node(det, "slit_length", item.slit_length, 
     962                {"unit": item.slit_length_unit}) 
     963 
    964964 
    965965    def _write_process_notes(self, datainfo, entry_node): 
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