Changeset 78312f7 in sasview for src/sas/sasgui/perspectives/fitting
- Timestamp:
- Jun 19, 2017 8:10:07 PM (7 years ago)
- Branches:
- master, ESS_GUI, ESS_GUI_Docs, ESS_GUI_batch_fitting, ESS_GUI_bumps_abstraction, ESS_GUI_iss1116, ESS_GUI_iss879, ESS_GUI_iss959, ESS_GUI_opencl, ESS_GUI_ordering, ESS_GUI_sync_sascalc, magnetic_scatt, release-4.2.2, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, ticket885, unittest-saveload
- Children:
- 2a0f33f
- Parents:
- bc04647
- Location:
- src/sas/sasgui/perspectives/fitting
- Files:
-
- 3 edited
Legend:
- Unmodified
- Added
- Removed
-
src/sas/sasgui/perspectives/fitting/basepage.py
r914c49d5 r78312f7 6 6 import sys 7 7 import os 8 import wx9 import numpy as np10 8 import time 11 9 import copy … … 14 12 import logging 15 13 import traceback 16 17 14 from collections import defaultdict 15 16 import numpy as np 17 18 import wx 18 19 from wx.lib.scrolledpanel import ScrolledPanel 19 20 20 21 from sasmodels.weights import MODELS as POLYDISPERSITY_MODELS 22 23 from sas.sascalc.dataloader.data_info import Detector 24 from sas.sascalc.dataloader.data_info import Source 21 25 22 26 from sas.sasgui.guiframe.panel_base import PanelBase … … 30 34 from sas.sasgui.guiframe.dataFitting import check_data_validity 31 35 from sas.sasgui.guiframe.gui_style import GUIFRAME_ID 32 from sas.sascalc.dataloader.data_info import Detector33 from sas.sascalc.dataloader.data_info import Source34 from sas.sasgui.perspectives.fitting.pagestate import PageState35 36 from sas.sasgui.guiframe.CategoryInstaller import CategoryInstaller 36 37 from sas.sasgui.guiframe.documentation_window import DocumentationWindow 38 39 from sas.sasgui.perspectives.fitting.pagestate import PageState 40 from sas.sasgui.perspectives.fitting.report_dialog import ReportDialog 37 41 38 42 logger = logging.getLogger(__name__) … … 619 623 # Get plot image from plotpanel 620 624 images, canvases = self.get_images() 621 # get the report dialog 622 self.state.report(images, canvases) 625 imgRAM, images, refs = self._build_plots_for_report(images, canvases) 626 627 # get the strings for report 628 report_str, text_str = self.state.report(fig_urls=refs) 629 630 # Show the dialog 631 report_list = [report_str, text_str, images] 632 dialog = ReportDialog(report_list, None, wx.ID_ANY, "") 633 dialog.Show() 634 635 def _build_plots_for_report(self, figs, canvases): 636 """ 637 Build image state that wx.html understand 638 by plotting, putting it into wx.FileSystem image object 639 """ 640 images = [] 641 refs = [] 642 643 # For no figures in the list, prepare empty plot 644 if figs is None or len(figs) == 0: 645 figs = [None] 646 647 # Loop over the list of figures 648 # use wx.MemoryFSHandler 649 imgRAM = wx.MemoryFSHandler() 650 for fig in figs: 651 if fig is not None: 652 ind = figs.index(fig) 653 canvas = canvases[ind] 654 655 # store the image in wx.FileSystem Object 656 wx.FileSystem.AddHandler(wx.MemoryFSHandler()) 657 658 # index of the fig 659 ind = figs.index(fig) 660 661 # AddFile, image can be retrieved with 'memory:filename' 662 name = 'img_fit%s.png' % ind 663 refs.append('memory:' + name) 664 imgRAM.AddFile(name, canvas.bitmap, wx.BITMAP_TYPE_PNG) 665 666 # append figs 667 images.append(fig) 668 669 return imgRAM, images, refs 670 623 671 624 672 def on_save(self, event): -
src/sas/sasgui/perspectives/fitting/pagestate.py
r959eb01 r78312f7 15 15 import os 16 16 import sys 17 import wx18 17 import copy 19 18 import logging … … 519 518 rep = "\nState name: %s\n" % self.file 520 519 t = time.localtime(self.timestamp) 521 time_str = time.strftime("%b %d %Y %H ;%M;%S ", t)520 time_str = time.strftime("%b %d %Y %H:%M:%S ", t) 522 521 523 522 rep += "State created: %s\n" % time_str … … 596 595 return rep 597 596 598 def set_report_string(self):597 def _get_report_string(self): 599 598 """ 600 599 Get the values (strings) from __str__ for report … … 611 610 q_range = "" 612 611 strings = self.__repr__() 612 fixed_parameter = False 613 613 lines = strings.split('\n') 614 615 614 # get all string values from __str__() 616 615 for line in lines: 617 value = ""618 content = line.split(":")619 name = content[0]620 try:621 value = content[1]622 except Exception:623 msg = "Report string expected 'name: value' but got %r" % line 624 logger.error(msg)625 if name .count("State created"):626 repo_time = "" +value627 if name.count("parameter name"):616 # Skip lines which are not key: value pairs, which includes 617 # blank lines and freeform notes in SASNotes fields. 618 if not ':' in line: 619 #msg = "Report string expected 'name: value' but got %r" % line 620 #logger.error(msg) 621 continue 622 623 name, value = [s.strip() for s in line.split(":", 1)] 624 if name == "State created": 625 repo_time = value 626 elif name == "parameter name": 628 627 val_name = value.split(".") 629 628 if len(val_name) > 1: … … 634 633 else: 635 634 param_string += value + ',' 636 if name == "value":635 elif name == "value": 637 636 param_string += value + ',' 638 fixed_parameter = False 639 if name == "selected": 640 if value == u' False': 641 fixed_parameter = True 642 if name == "error value": 637 elif name == "selected": 638 # remember if it is fixed when reporting error value 639 fixed_parameter = (value == u'False') 640 elif name == "error value": 643 641 if fixed_parameter: 644 642 param_string += '(fixed),' 645 643 else: 646 644 param_string += value + ',' 647 if name == "parameter unit":645 elif name == "parameter unit": 648 646 param_string += value + ':' 649 if name == "Value of Chisqr":647 elif name == "Value of Chisqr": 650 648 chi2 = ("Chi2/Npts = " + value) 651 649 chi2_string = CENTRE % chi2 652 if name == "Title":650 elif name == "Title": 653 651 if len(value.strip()) == 0: 654 652 continue 655 653 title = value + " [" + repo_time + "]" 656 654 title_name = HEADER % title 657 if name == "data":655 elif name == "data": 658 656 try: 659 file_value = ("File name:" + content[2]) 657 # parsing "data : File: filename [mmm dd hh:mm]" 658 name = value.split(':', 1)[1].strip() 659 file_value = "File name:" + name 660 660 file_name = CENTRE % file_value 661 661 if len(title) == 0: 662 title = content[2]+ " [" + repo_time + "]"662 title = name + " [" + repo_time + "]" 663 663 title_name = HEADER % title 664 664 except Exception: 665 665 msg = "While parsing 'data: ...'\n" 666 666 logger.error(msg + traceback.format_exc()) 667 if name == "model name":667 elif name == "model name": 668 668 try: 669 modelname = "Model name:" + content[1]670 except :669 modelname = "Model name:" + value 670 except Exception: 671 671 modelname = "Model name:" + " NAN" 672 672 model_name = CENTRE % modelname 673 673 674 if name == "Plotting Range":674 elif name == "Plotting Range": 675 675 try: 676 q_range = content[1] + " = " + content[2] \ 677 + " = " + content[3].split(",")[0] 676 parts = value.split(':') 677 q_range = parts[0] + " = " + parts[1] \ 678 + " = " + parts[2].split(",")[0] 678 679 q_name = ("Q Range: " + q_range) 679 680 q_range = CENTRE % q_name … … 681 682 msg = "While parsing 'Plotting Range: ...'\n" 682 683 logger.error(msg + traceback.format_exc()) 684 683 685 paramval = "" 684 686 for lines in param_string.split(":"): … … 709 711 "\n" + paramval_string + \ 710 712 "\n" + ELINE + \ 711 "\n" + FEET_1 % title + \ 712 "\n" + FEET_2 713 "\n" + FEET_1 % title 713 714 714 715 return html_string, text_string, title … … 723 724 return name 724 725 725 def report(self, fig s=None, canvases=None):726 def report(self, fig_urls): 726 727 """ 727 728 Invoke report dialog panel … … 729 730 : param figs: list of pylab figures [list] 730 731 """ 731 from sas.sasgui.perspectives.fitting.report_dialog import ReportDialog732 732 # get the strings for report 733 html_str, text_str, title = self. set_report_string()733 html_str, text_str, title = self._get_report_string() 734 734 # Allow 2 figures to append 735 if len(figs) == 1: 736 add_str = FEET_3 737 elif len(figs) == 2: 738 add_str = ELINE 739 add_str += FEET_2 % ("%s") 740 add_str += ELINE 741 add_str += FEET_3 742 elif len(figs) > 2: 743 add_str = ELINE 744 add_str += FEET_2 % ("%s") 745 add_str += ELINE 746 add_str += FEET_2 % ("%s") 747 add_str += ELINE 748 add_str += FEET_3 749 else: 750 add_str = "" 735 image_links = [FEET_2%fig for fig in fig_urls] 751 736 752 737 # final report html strings 753 report_str = html_str % ("%s") + add_str 754 755 # make plot image 756 images = self.set_plot_state(figs, canvases) 757 report_list = [report_str, text_str, images] 758 dialog = ReportDialog(report_list, None, wx.ID_ANY, "") 759 dialog.Show() 738 report_str = html_str + ELINE.join(image_links) 739 740 return report_str, text_str 760 741 761 742 def _to_xml_helper(self, thelist, element, newdoc): … … 805 786 try: 806 787 top_element = newdoc.createElement(FITTING_NODE_NAME) 807 except :788 except Exception: 808 789 string = etree.tostring(doc, pretty_print=True) 809 790 newdoc = parseString(string) … … 814 795 try: 815 796 entry_node.appendChild(top_element) 816 except :797 except Exception: 817 798 node_name = entry_node.tag 818 799 node_list = newdoc.getElementsByTagName(node_name) … … 1036 1017 try: 1037 1018 self.timestamp = float(entry.get('epoch')) 1038 except :1019 except Exception: 1039 1020 msg = "PageState.fromXML: Could not" 1040 1021 msg += " read timestamp\n %s" % sys.exc_value … … 1104 1085 dic[name] = np.array(value_list) 1105 1086 setattr(self, varname, dic) 1106 1107 def set_plot_state(self, figs, canvases):1108 """1109 Build image state that wx.html understand1110 by plotting, putting it into wx.FileSystem image object1111 1112 """1113 images = []1114 1115 # Reset memory1116 self.imgRAM = None1117 wx.MemoryFSHandler()1118 1119 # For no figures in the list, prepare empty plot1120 if figs is None or len(figs) == 0:1121 figs = [None]1122 1123 # Loop over the list of figures1124 # use wx.MemoryFSHandler1125 self.imgRAM = wx.MemoryFSHandler()1126 for fig in figs:1127 if fig is not None:1128 ind = figs.index(fig)1129 canvas = canvases[ind]1130 1131 # store the image in wx.FileSystem Object1132 wx.FileSystem.AddHandler(wx.MemoryFSHandler())1133 1134 # index of the fig1135 ind = figs.index(fig)1136 1137 # AddFile, image can be retrieved with 'memory:filename'1138 self.imgRAM.AddFile('img_fit%s.png' % ind,1139 canvas.bitmap, wx.BITMAP_TYPE_PNG)1140 1141 # append figs1142 images.append(fig)1143 1144 return images1145 1087 1146 1088 … … 1410 1352 return doc 1411 1353 1412 # Simple html report templ et1354 # Simple html report template 1413 1355 HEADER = "<html>\n" 1414 1356 HEADER += "<head>\n" … … 1438 1380 """ 1439 1381 FEET_2 = \ 1440 """ 1441 <img src="%s" > 1442 </img> 1382 """<img src="%s" ></img> 1443 1383 """ 1444 1384 FEET_3 = \ 1445 """ 1446 </center> 1385 """</center> 1447 1386 </div> 1448 1387 </body> 1449 1388 </html> 1450 1389 """ 1451 ELINE = "<p class=MsoNormal> </p>" 1390 ELINE = """<p class=MsoNormal> </p> 1391 """ -
src/sas/sasgui/perspectives/fitting/report_dialog.py
r7432acb r78312f7 38 38 # number of images of plot 39 39 self.nimages = len(self.report_list[2]) 40 41 if self.report_list[2] is not None: 42 # put image path in the report string 43 if len(self.report_list[2]) == 1: 44 self.report_html = self.report_list[0] % \ 45 "memory:img_fit0.png" 46 elif len(self.report_list[2]) == 2: 47 self.report_html = self.report_list[0] % \ 48 ("memory:img_fit0.png", 49 "memory:img_fit1.png") 50 # allows up to three images 51 else: 52 self.report_html = self.report_list[0] % \ 53 ("memory:img_fit0.png", 54 "memory:img_fit1.png", 55 "memory:img_fit2.png") 56 else: 57 self.report_html = self.report_list[0] 40 self.report_html = self.report_list[0] 58 41 # layout 59 42 self._setup_layout() … … 105 88 elif self.nimages == 3: 106 89 html = report_frame % (str(pic_fname[0]), str(pic_fname[1]), 107 90 str(pic_fname[2])) 108 91 109 92 # make/open file in case of absence … … 118 101 #Windows 119 102 os.startfile(str(fName)) 120 except :103 except Exception: 121 104 try: 122 105 #Mac 123 106 os.system("open %s" % fName) 124 except :107 except Exception: 125 108 #DO not open 126 109 pass
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