Changeset 3bfcd9e in sasview for src


Ignore:
Timestamp:
Aug 13, 2018 1:47:15 PM (6 years ago)
Author:
GitHub <noreply@…>
Branches:
master, magnetic_scatt, release-4.2.2, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, unittest-saveload
Children:
ec52ea1
Parents:
fde3042 (diff), e2663b7 (diff)
Note: this is a merge changeset, the changes displayed below correspond to the merge itself.
Use the (diff) links above to see all the changes relative to each parent.
git-author:
Paul Butler <butlerpd@…> (08/13/18 13:47:15)
git-committer:
GitHub <noreply@…> (08/13/18 13:47:15)
Message:

Merge pull request #161 from SasView?/ticket-1142-plugin-reload

Ticket 1142 plugin reload

addresses #1142 hopefully for the last time - actually will leave the ticket open as there is an improved fix that is waiting in a sasmodels PR to be merged after the release - move ticket to 4.3 now

Location:
src/sas
Files:
5 edited

Legend:

Unmodified
Added
Removed
  • src/sas/sasgui/perspectives/calculator/pyconsole.py

    r4627657 re2663b7  
    2828    Check that the model on the path can run. 
    2929    """ 
     30    # TODO: fix model caching 
     31    # model_test.run_one() is directly forcing a reload of the module, but 
     32    # sasview_model is caching models that have already been loaded. 
     33    # If the sasview load happens before the test, then the module is 
     34    # reloaded out from under it, which causes the global variables in 
     35    # the model function definitions to be cleared (at least in python 2.7). 
     36    # To fix the proximal problem of models failing on test, perform the 
     37    # run_one() tests first.  To fix the deeper problem we should either 
     38    # remove caching from sasmodels.sasview_model.load_custom_model() or 
     39    # add caching to sasmodels.custom.load_custom_kernel_module().  Another 
     40    # option is to add a runTests method to SasviewModel which runs the 
     41    # test suite directly from the model info structure.  Probably some 
     42    # combination of options: 
     43    #    (1) have this function (check_model) operate on a loaded model 
     44    #    so that caching isn't needed in sasview_models.load_custom_model 
     45    #    (2) add the runTests method to SasviewModel so that tests can 
     46    #    be run on a loaded module. 
     47    # 
     48    # Also, note that the model test suite runs the equivalent of the 
     49    # "try running the model" block below, and doesn't need to be run 
     50    # twice.  The reason for duplicating the block here is to generate 
     51    # an exception that show_model_output can catch.  Need to write the 
     52    # runTests method so that it returns success flag as well as output 
     53    # string so that the extra test is not necessary. 
     54 
     55    # check the model's unit tests run 
     56    from sasmodels.model_test import run_one 
     57    result = run_one(path) 
     58 
     59    # remove cached version of the model, if any 
     60    from sasmodels import sasview_model 
     61    sasview_model.MODEL_BY_PATH.pop(path, None) 
     62 
    3063    # try running the model 
    31     from sasmodels.sasview_model import load_custom_model 
    32     Model = load_custom_model(path) 
     64    Model = sasview_model.load_custom_model(path) 
    3365    model = Model() 
    3466    q =  np.array([0.01, 0.1]) 
     
    3668    qx, qy =  np.array([0.01, 0.01]), np.array([0.1, 0.1]) 
    3769    Iqxy = model.evalDistribution([qx, qy]) 
    38  
    39     # check the model's unit tests run 
    40     from sasmodels.model_test import run_one 
    41     result = run_one(path) 
    4270 
    4371    return result 
  • src/sas/sascalc/dataloader/readers/abs_reader.py

    re3775c6 rbd5c3b1  
    171171 
    172172                try: 
    173                     _x = float(toks[0]) 
     173                    _x = float(toks[4]) 
    174174                    _y = float(toks[1]) 
    175175                    _dy = float(toks[2]) 
  • src/sas/sascalc/fit/pagestate.py

    r3b070a0 r59873e1  
    1313################################################################################ 
    1414import time 
     15import re 
    1516import os 
    1617import sys 
     
    962963        if node.get('version'): 
    963964            # Get the version for model conversion purposes 
    964             self.version = tuple(int(e) for e in 
    965                                  str.split(node.get('version'), ".")) 
     965            x = re.sub('[^\d.]', '', node.get('version')) 
     966            self.version = tuple(int(e) for e in str.split(x, ".")) 
    966967            # The tuple must be at least 3 items long 
    967968            while len(self.version) < 3: 
  • src/sas/sasgui/guiframe/local_perspectives/plotting/parameters_panel_slicer.py

    ra26f67f ra20a255  
    251251            self.bck.Add(self.batch_slicer_button, (iy, ix), (1, 1), 
    252252                         wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 15) 
     253            # Help button 
     254 
     255            self.bt_help = wx.Button(self, wx.NewId(), "HELP") 
     256            self.bt_help.SetToolTipString( 
     257                "Help for the slicer parameters and batch slicing.") 
     258            self.bck.Add(self.bt_help, (iy, 1), (1, 1), 
     259                         wx.ALIGN_RIGHT | wx.ADJUST_MINSIZE, 15) 
     260            wx.EVT_BUTTON(self, self.bt_help.GetId(), self.on_help) 
     261 
    253262            iy += 1 
    254263            self.bck.Add((5, 5), (iy, ix), (1, 1), 
    255264                         wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 5) 
     265 
    256266        self.bck.Layout() 
    257267        self.bck.Fit(self) 
     
    535545            self.default_value += "_{0}".format(key).split(" [")[0] 
    536546            self.default_value += "-{:.2f}".format(params[key]) 
     547 
     548    def on_help(self, event=None): 
     549        """ 
     550        Opens a help window for the slicer parameters/batch slicing window 
     551        :param event: 
     552        :return: 
     553        """ 
     554        from sas.sasgui.guiframe.documentation_window import DocumentationWindow 
     555 
     556        _TreeLocation = "user/sasgui/guiframe/graph_help.html" 
     557        _doc_viewer = DocumentationWindow(self, wx.ID_ANY, _TreeLocation, 
     558                                          "#d-data-averaging", 
     559                                          "Data Explorer Help") 
  • src/sas/sasgui/guiframe/media/graph_help.rst

    r5ed76f8 rde68f78  
    266266 
    267267.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ 
     268.. _d_data_averaging: 
    268269 
    2692702D data averaging 
     
    301302Alternatively, once a 'slicer' is active you can also select the region to 
    302303average by bringing back the *Dataset Menu* and selecting *Edit Slicer 
    303 Parameters*. A dialog window will appear in which you can enter values to 
    304 define a region or select the number of points to plot (*nbins*). 
     304Parameters and Batch Fitting*. A dialog window will appear in which you can 
     305enter values to define a region, select the number of points to plot (*nbins*), 
     306or apply the slicer to any or all other 2D data plots. 
    305307 
    306308A separate plot window will also have appeared, displaying the requested 
     
    315317 
    316318To remove a 'slicer', bring back the *Dataset menu* and select *Clear Slicer*. 
     319 
     320Batch Slicing 
     321^^^^^^^^^^^^^ 
     322 
     323A slicer can be applied to any or all existing 2D data plots using the 'Slicer 
     324Parameters' window. To open the window, select *Edit Slicer Parameters and Batch 
     325Fitting* in the *Dataset Menu* (see Invoking_the_dataset_menu_). Batch slicing 
     326options are available at the bottom of the window. 
     327 
     328Select the 2D plots you want to apply the slicer to. All 2D plots are selected 
     329by default. The resulting 1D data for all slicers can be saved as a text file 
     330and then sent to fitting by selecting the *Auto save generated 1D* check box. 
     331Sending data to the fitting perspective requires the data be saved. 
     332 
     333Once the auto save check box is selected, you can select where the files are 
     334saved. The file name for the saved data is the slicer name plus the file name 
     335of the original data set, plus what is in the *Append to file name* field. The 
     336default value in the append to field includes the names and values for all of 
     337the slicer parameters. 
     338 
     339The batch of slices can be sent to fitting if desired, with three options 
     340available. The first is to not fit the data, the second is to send the 
     341slices to individual fit pages, and the third is to send all sliced data to a 
     342single batch fit window. 
     343 
     344Clicking *Apply Slicer to Selected Plots* will create a slicer for each selected 
     345plot with the parameters entered in the 'Slicer Parameters' window. Depending on 
     346the options selected the data may then be saved, loaded as separate data sets in 
     347the data manager panel, and finally sent to fitting. 
    317348 
    318349Unmasked circular average 
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