Changeset 1679f2f in sasview


Ignore:
Timestamp:
Aug 12, 2011 2:30:37 PM (13 years ago)
Author:
Jessica Tumarkin <jtumarki@…>
Branches:
master, ESS_GUI, ESS_GUI_Docs, ESS_GUI_batch_fitting, ESS_GUI_bumps_abstraction, ESS_GUI_iss1116, ESS_GUI_iss879, ESS_GUI_iss959, ESS_GUI_opencl, ESS_GUI_ordering, ESS_GUI_sync_sascalc, costrafo411, magnetic_scatt, release-4.1.1, release-4.1.2, release-4.2.2, release_4.0.1, ticket-1009, ticket-1094-headless, ticket-1242-2d-resolution, ticket-1243, ticket-1249, ticket885, unittest-saveload
Children:
fa597990
Parents:
25cba72
Message:

new html files for sphinx docs

Files:
2 added
28 edited

Legend:

Unmodified
Added
Removed

  • invariantview/docs/sphinx/_build/html/api/index.html

    rb514e7a r1679f2f  
    6060<tr class="field"><th class="field-name">Release:</th><td class="field-body">0.1</td> 
    6161</tr> 
    62 <tr class="field"><th class="field-name">Date:</th><td class="field-body">August 08, 2011</td> 
     62<tr class="field"><th class="field-name">Date:</th><td class="field-body">August 12, 2011</td> 
    6363</tr> 
    6464</tbody> 

  • invariantview/docs/sphinx/_build/html/searchindex.js

    rb514e7a r1679f2f  
    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  • inversionview/docs/sphinx/_build/html/_sources/index.txt

    r11f5196 r1679f2f  
    44   contain the root `toctree` directive. 
    55 
    6 Welcome to prview's documentation! 
    7 ================================== 
     6Welcome to Inversionview's documentation! 
     7========================================= 
    88 
    99Contents: 

  • inversionview/docs/sphinx/_build/html/api/perspectives/pr/index.html

    r11f5196 r1679f2f  
    2525    <link rel="top" title="prview v0.1.0 documentation" href="../../../index.html" /> 
    2626    <link rel="next" title="explore_dialog" href="explore_dialog.html" /> 
    27     <link rel="prev" title="Welcome to prview’s documentation!" href="../../../index.html" />  
     27    <link rel="prev" title="Welcome to Inversionview’s documentation!" href="../../../index.html" />  
    2828  </head> 
    2929  <body> 
    … …  
    3838             accesskey="N">next</a> |</li> 
    3939        <li class="right" > 
    40           <a href="../../../index.html" title="Welcome to prview’s documentation!" 
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    4242        <li><a href="../../../index.html">prview v0.1.0 documentation</a> &raquo;</li>  
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    5757<tr class="field"><th class="field-name">Release:</th><td class="field-body">0.1</td> 
    5858</tr> 
    59 <tr class="field"><th class="field-name">Date:</th><td class="field-body">August 08, 2011</td> 
     59<tr class="field"><th class="field-name">Date:</th><td class="field-body">August 12, 2011</td> 
    6060</tr> 
    6161</tbody> 
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    100100  <p class="topless"><a href="../../../index.html" 
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  • inversionview/docs/sphinx/_build/html/index.html

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    88    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> 
    99     
    10     <title>Welcome to prview’s documentation! &mdash; prview v0.1.0 documentation</title> 
     10    <title>Welcome to Inversionview’s documentation! &mdash; prview v0.1.0 documentation</title> 
    1111    <link rel="stylesheet" href="_static/default.css" type="text/css" /> 
    1212    <link rel="stylesheet" href="_static/pygments.css" type="text/css" /> 
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    4545          <div class="body"> 
    4646             
    47   <div class="section" id="welcome-to-prview-s-documentation"> 
    48 <h1>Welcome to prview&#8217;s documentation!<a class="headerlink" href="#welcome-to-prview-s-documentation" title="Permalink to this headline">¶</a></h1> 
     47  <div class="section" id="welcome-to-inversionview-s-documentation"> 
     48<h1>Welcome to Inversionview&#8217;s documentation!<a class="headerlink" href="#welcome-to-inversionview-s-documentation" title="Permalink to this headline">¶</a></h1> 
    4949<p>Contents:</p> 
    5050<div class="toctree-wrapper compound"> 
    … …  
    7979  <h3><a href="#">Table Of Contents</a></h3> 
    8080  <ul> 
    81 <li><a class="reference internal" href="#">Welcome to prview&#8217;s documentation!</a><ul> 
     81<li><a class="reference internal" href="#">Welcome to Inversionview&#8217;s documentation!</a><ul> 
    8282</ul> 
    8383</li> 

  • inversionview/docs/sphinx/_build/html/searchindex.js

    r11f5196 r1679f2f  
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  • park_integration/docs/sphinx/_build/html/api/AbstractFitEngine.html

    r41517a6 r1679f2f  
    3636             accesskey="I">index</a></li> 
    3737        <li class="right" > 
     38          <a href="../py-modindex.html" title="Python Module Index" 
     39             >modules</a> |</li> 
     40        <li class="right" > 
    3841          <a href="Fitting.html" title="Fitting" 
    3942             accesskey="N">next</a> |</li> 
    … …  
    5356  <div class="section" id="abstractfitengine"> 
    5457<h1>AbstractFitEngine<a class="headerlink" href="#abstractfitengine" title="Permalink to this headline">¶</a></h1> 
    55 <div class="section" id="mod-sans-fit-abstractfitengine"> 
    56 <h2>:mod:` sans.fit.AbstractFitEngine`<a class="headerlink" href="#mod-sans-fit-abstractfitengine" title="Permalink to this headline">¶</a></h2> 
     58<div class="section" id="module-sans.fit.AbstractFitEngine"> 
     59<span id="mod-sans-fit-abstractfitengine"></span><h2>:mod:` sans.fit.AbstractFitEngine`<a class="headerlink" href="#module-sans.fit.AbstractFitEngine" title="Permalink to this headline">¶</a></h2> 
     60<dl class="exception"> 
     61<dt id="sans.fit.AbstractFitEngine.FitAbort"> 
     62<em class="property">exception </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">FitAbort</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitAbort" title="Permalink to this definition">¶</a></dt> 
     63<dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">exceptions.Exception</span></tt></p> 
     64<p>Exception raise to stop the fit</p> 
     65<dl class="attribute"> 
     66<dt id="sans.fit.AbstractFitEngine.FitAbort.args"> 
     67<tt class="descname">args</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitAbort.args" title="Permalink to this definition">¶</a></dt> 
     68<dd></dd></dl> 
     69 
     70<dl class="attribute"> 
     71<dt id="sans.fit.AbstractFitEngine.FitAbort.message"> 
     72<tt class="descname">message</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitAbort.message" title="Permalink to this definition">¶</a></dt> 
     73<dd><p>exception message</p> 
     74</dd></dl> 
     75 
     76</dd></dl> 
     77 
     78<dl class="class"> 
     79<dt id="sans.fit.AbstractFitEngine.FitArrange"> 
     80<em class="property">class </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">FitArrange</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange" title="Permalink to this definition">¶</a></dt> 
     81<dd><dl class="method"> 
     82<dt id="sans.fit.AbstractFitEngine.FitArrange.add_data"> 
     83<tt class="descname">add_data</tt><big>(</big><em>data</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange.add_data" title="Permalink to this definition">¶</a></dt> 
     84<dd><p>add_data fill a self.data_list with data to fit</p> 
     85<table class="docutils field-list" frame="void" rules="none"> 
     86<col class="field-name" /> 
     87<col class="field-body" /> 
     88<tbody valign="top"> 
     89<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>data</strong> &#8211; Data to add in the list</td> 
     90</tr> 
     91</tbody> 
     92</table> 
     93</dd></dl> 
     94 
     95<dl class="method"> 
     96<dt id="sans.fit.AbstractFitEngine.FitArrange.get_data"> 
     97<tt class="descname">get_data</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange.get_data" title="Permalink to this definition">¶</a></dt> 
     98<dd><table class="docutils field-list" frame="void" rules="none"> 
     99<col class="field-name" /> 
     100<col class="field-body" /> 
     101<tbody valign="top"> 
     102<tr class="field"><th class="field-name">Returns:</th><td class="field-body">list of data data_list</td> 
     103</tr> 
     104</tbody> 
     105</table> 
     106</dd></dl> 
     107 
     108<dl class="method"> 
     109<dt id="sans.fit.AbstractFitEngine.FitArrange.get_model"> 
     110<tt class="descname">get_model</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange.get_model" title="Permalink to this definition">¶</a></dt> 
     111<dd><table class="docutils field-list" frame="void" rules="none"> 
     112<col class="field-name" /> 
     113<col class="field-body" /> 
     114<tbody valign="top"> 
     115<tr class="field"><th class="field-name">Returns:</th><td class="field-body">saved model</td> 
     116</tr> 
     117</tbody> 
     118</table> 
     119</dd></dl> 
     120 
     121<dl class="method"> 
     122<dt id="sans.fit.AbstractFitEngine.FitArrange.get_to_fit"> 
     123<tt class="descname">get_to_fit</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange.get_to_fit" title="Permalink to this definition">¶</a></dt> 
     124<dd><p>return self.selected value</p> 
     125</dd></dl> 
     126 
     127<dl class="method"> 
     128<dt id="sans.fit.AbstractFitEngine.FitArrange.remove_data"> 
     129<tt class="descname">remove_data</tt><big>(</big><em>data</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange.remove_data" title="Permalink to this definition">¶</a></dt> 
     130<dd><p>Remove one element from the list</p> 
     131<table class="docutils field-list" frame="void" rules="none"> 
     132<col class="field-name" /> 
     133<col class="field-body" /> 
     134<tbody valign="top"> 
     135<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>data</strong> &#8211; Data to remove from data_list</td> 
     136</tr> 
     137</tbody> 
     138</table> 
     139</dd></dl> 
     140 
     141<dl class="method"> 
     142<dt id="sans.fit.AbstractFitEngine.FitArrange.set_model"> 
     143<tt class="descname">set_model</tt><big>(</big><em>model</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange.set_model" title="Permalink to this definition">¶</a></dt> 
     144<dd><p>set_model save a copy of the model</p> 
     145<table class="docutils field-list" frame="void" rules="none"> 
     146<col class="field-name" /> 
     147<col class="field-body" /> 
     148<tbody valign="top"> 
     149<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>model</strong> &#8211; the model being set</td> 
     150</tr> 
     151</tbody> 
     152</table> 
     153</dd></dl> 
     154 
     155<dl class="method"> 
     156<dt id="sans.fit.AbstractFitEngine.FitArrange.set_to_fit"> 
     157<tt class="descname">set_to_fit</tt><big>(</big><em>value=0</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitArrange.set_to_fit" title="Permalink to this definition">¶</a></dt> 
     158<dd><p>set self.selected to 0 or 1  for other values raise an exception</p> 
     159<table class="docutils field-list" frame="void" rules="none"> 
     160<col class="field-name" /> 
     161<col class="field-body" /> 
     162<tbody valign="top"> 
     163<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>value</strong> &#8211; integer between 0 or 1</td> 
     164</tr> 
     165</tbody> 
     166</table> 
     167</dd></dl> 
     168 
     169</dd></dl> 
     170 
     171<dl class="class"> 
     172<dt id="sans.fit.AbstractFitEngine.FitData1D"> 
     173<em class="property">class </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">FitData1D</tt><big>(</big><em>x</em>, <em>y</em>, <em>dx=None</em>, <em>dy=None</em>, <em>smearer=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D" title="Permalink to this definition">¶</a></dt> 
     174<dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">sans.dataloader.data_info.Data1D</span></tt></p> 
     175<p>Wrapper class  for SANS data  
     176FitData1D inherits from DataLoader.data_info.Data1D. Implements  
     177a way to get residuals from data.</p> 
     178<dl class="method"> 
     179<dt id="sans.fit.AbstractFitEngine.FitData1D.add_notes"> 
     180<tt class="descname">add_notes</tt><big>(</big><em>message=''</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.add_notes" title="Permalink to this definition">¶</a></dt> 
     181<dd><p>Add notes to datainfo</p> 
     182</dd></dl> 
     183 
     184<dl class="method"> 
     185<dt id="sans.fit.AbstractFitEngine.FitData1D.append_empty_process"> 
     186<tt class="descname">append_empty_process</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.append_empty_process" title="Permalink to this definition">¶</a></dt> 
     187<dd></dd></dl> 
     188 
     189<dl class="method"> 
     190<dt id="sans.fit.AbstractFitEngine.FitData1D.clone_without_data"> 
     191<tt class="descname">clone_without_data</tt><big>(</big><em>length=0</em>, <em>clone=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.clone_without_data" title="Permalink to this definition">¶</a></dt> 
     192<dd><p>Clone the current object, without copying the data (which 
     193will be filled out by a subsequent operation). 
     194The data arrays will be initialized to zero.</p> 
     195<table class="docutils field-list" frame="void" rules="none"> 
     196<col class="field-name" /> 
     197<col class="field-body" /> 
     198<tbody valign="top"> 
     199<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> 
     200<li><strong>length</strong> &#8211; length of the data array to be initialized</li> 
     201<li><strong>clone</strong> &#8211; if provided, the data will be copied to clone</li> 
     202</ul> 
     203</td> 
     204</tr> 
     205</tbody> 
     206</table> 
     207</dd></dl> 
     208 
     209<dl class="method"> 
     210<dt id="sans.fit.AbstractFitEngine.FitData1D.get_fit_range"> 
     211<tt class="descname">get_fit_range</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.get_fit_range" title="Permalink to this definition">¶</a></dt> 
     212<dd><p>return the range of data.x to fit</p> 
     213</dd></dl> 
     214 
     215<dl class="method"> 
     216<dt id="sans.fit.AbstractFitEngine.FitData1D.is_slit_smeared"> 
     217<tt class="descname">is_slit_smeared</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.is_slit_smeared" title="Permalink to this definition">¶</a></dt> 
     218<dd><p>Check whether the data has slit smearing information</p> 
     219<table class="docutils field-list" frame="void" rules="none"> 
     220<col class="field-name" /> 
     221<col class="field-body" /> 
     222<tbody valign="top"> 
     223<tr class="field"><th class="field-name">Returns:</th><td class="field-body">True is slit smearing info is present, False otherwise</td> 
     224</tr> 
     225</tbody> 
     226</table> 
     227</dd></dl> 
     228 
     229<dl class="method"> 
     230<dt id="sans.fit.AbstractFitEngine.FitData1D.residuals"> 
     231<tt class="descname">residuals</tt><big>(</big><em>fn</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.residuals" title="Permalink to this definition">¶</a></dt> 
     232<dd><p>Compute residuals.</p> 
     233<p>If self.smearer has been set, use if to smear 
     234the data before computing chi squared.</p> 
     235<table class="docutils field-list" frame="void" rules="none"> 
     236<col class="field-name" /> 
     237<col class="field-body" /> 
     238<tbody valign="top"> 
     239<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>fn</strong> &#8211; function that return model value</td> 
     240</tr> 
     241<tr class="field"><th class="field-name">Returns:</th><td class="field-body">residuals</td> 
     242</tr> 
     243</tbody> 
     244</table> 
     245</dd></dl> 
     246 
     247<dl class="method"> 
     248<dt id="sans.fit.AbstractFitEngine.FitData1D.residuals_deriv"> 
     249<tt class="descname">residuals_deriv</tt><big>(</big><em>model</em>, <em>pars=</em><span class="optional">[</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.residuals_deriv" title="Permalink to this definition">¶</a></dt> 
     250<dd><table class="docutils field-list" frame="void" rules="none"> 
     251<col class="field-name" /> 
     252<col class="field-body" /> 
     253<tbody valign="top"> 
     254<tr class="field"><th class="field-name">Returns:</th><td class="field-body">residuals derivatives .</td> 
     255</tr> 
     256<tr class="field"><th class="field-name">Note :</th><td class="field-body">in this case just return empty array</td> 
     257</tr> 
     258</tbody> 
     259</table> 
     260</dd></dl> 
     261 
     262<dl class="method"> 
     263<dt id="sans.fit.AbstractFitEngine.FitData1D.set_fit_range"> 
     264<tt class="descname">set_fit_range</tt><big>(</big><em>qmin=None</em>, <em>qmax=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.set_fit_range" title="Permalink to this definition">¶</a></dt> 
     265<dd><p>to set the fit range</p> 
     266</dd></dl> 
     267 
     268<dl class="method"> 
     269<dt id="sans.fit.AbstractFitEngine.FitData1D.xaxis"> 
     270<tt class="descname">xaxis</tt><big>(</big><em>label</em>, <em>unit</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.xaxis" title="Permalink to this definition">¶</a></dt> 
     271<dd><p>set the x axis label and unit</p> 
     272</dd></dl> 
     273 
     274<dl class="method"> 
     275<dt id="sans.fit.AbstractFitEngine.FitData1D.yaxis"> 
     276<tt class="descname">yaxis</tt><big>(</big><em>label</em>, <em>unit</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData1D.yaxis" title="Permalink to this definition">¶</a></dt> 
     277<dd><p>set the y axis label and unit</p> 
     278</dd></dl> 
     279 
     280</dd></dl> 
     281 
     282<dl class="class"> 
     283<dt id="sans.fit.AbstractFitEngine.FitData2D"> 
     284<em class="property">class </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">FitData2D</tt><big>(</big><em>sans_data2d</em>, <em>data=None</em>, <em>err_data=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D" title="Permalink to this definition">¶</a></dt> 
     285<dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">sans.dataloader.data_info.Data2D</span></tt></p> 
     286<p>Wrapper class  for SANS data</p> 
     287<dl class="method"> 
     288<dt id="sans.fit.AbstractFitEngine.FitData2D.add_notes"> 
     289<tt class="descname">add_notes</tt><big>(</big><em>message=''</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.add_notes" title="Permalink to this definition">¶</a></dt> 
     290<dd><p>Add notes to datainfo</p> 
     291</dd></dl> 
     292 
     293<dl class="method"> 
     294<dt id="sans.fit.AbstractFitEngine.FitData2D.append_empty_process"> 
     295<tt class="descname">append_empty_process</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.append_empty_process" title="Permalink to this definition">¶</a></dt> 
     296<dd></dd></dl> 
     297 
     298<dl class="method"> 
     299<dt id="sans.fit.AbstractFitEngine.FitData2D.clone_without_data"> 
     300<tt class="descname">clone_without_data</tt><big>(</big><em>length=0</em>, <em>clone=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.clone_without_data" title="Permalink to this definition">¶</a></dt> 
     301<dd><p>Clone the current object, without copying the data (which 
     302will be filled out by a subsequent operation). 
     303The data arrays will be initialized to zero.</p> 
     304<table class="docutils field-list" frame="void" rules="none"> 
     305<col class="field-name" /> 
     306<col class="field-body" /> 
     307<tbody valign="top"> 
     308<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> 
     309<li><strong>length</strong> &#8211; length of the data array to be initialized</li> 
     310<li><strong>clone</strong> &#8211; if provided, the data will be copied to clone</li> 
     311</ul> 
     312</td> 
     313</tr> 
     314</tbody> 
     315</table> 
     316</dd></dl> 
     317 
     318<dl class="method"> 
     319<dt id="sans.fit.AbstractFitEngine.FitData2D.get_fit_range"> 
     320<tt class="descname">get_fit_range</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.get_fit_range" title="Permalink to this definition">¶</a></dt> 
     321<dd><p>return the range of data.x to fit</p> 
     322</dd></dl> 
     323 
     324<dl class="method"> 
     325<dt id="sans.fit.AbstractFitEngine.FitData2D.residuals"> 
     326<tt class="descname">residuals</tt><big>(</big><em>fn</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.residuals" title="Permalink to this definition">¶</a></dt> 
     327<dd><p>return the residuals</p> 
     328</dd></dl> 
     329 
     330<dl class="method"> 
     331<dt id="sans.fit.AbstractFitEngine.FitData2D.residuals_deriv"> 
     332<tt class="descname">residuals_deriv</tt><big>(</big><em>model</em>, <em>pars=</em><span class="optional">[</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.residuals_deriv" title="Permalink to this definition">¶</a></dt> 
     333<dd><table class="docutils field-list" frame="void" rules="none"> 
     334<col class="field-name" /> 
     335<col class="field-body" /> 
     336<tbody valign="top"> 
     337<tr class="field"><th class="field-name">Returns:</th><td class="field-body">residuals derivatives .</td> 
     338</tr> 
     339<tr class="field"><th class="field-name">Note :</th><td class="field-body">in this case just return empty array</td> 
     340</tr> 
     341</tbody> 
     342</table> 
     343</dd></dl> 
     344 
     345<dl class="method"> 
     346<dt id="sans.fit.AbstractFitEngine.FitData2D.set_data"> 
     347<tt class="descname">set_data</tt><big>(</big><em>sans_data2d</em>, <em>qmin=None</em>, <em>qmax=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.set_data" title="Permalink to this definition">¶</a></dt> 
     348<dd><p>Determine the correct qx_data and qy_data within range to fit</p> 
     349</dd></dl> 
     350 
     351<dl class="method"> 
     352<dt id="sans.fit.AbstractFitEngine.FitData2D.set_fit_range"> 
     353<tt class="descname">set_fit_range</tt><big>(</big><em>qmin=None</em>, <em>qmax=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.set_fit_range" title="Permalink to this definition">¶</a></dt> 
     354<dd><p>to set the fit range</p> 
     355</dd></dl> 
     356 
     357<dl class="method"> 
     358<dt id="sans.fit.AbstractFitEngine.FitData2D.set_smearer"> 
     359<tt class="descname">set_smearer</tt><big>(</big><em>smearer</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.set_smearer" title="Permalink to this definition">¶</a></dt> 
     360<dd><p>Set smearer</p> 
     361</dd></dl> 
     362 
     363<dl class="method"> 
     364<dt id="sans.fit.AbstractFitEngine.FitData2D.xaxis"> 
     365<tt class="descname">xaxis</tt><big>(</big><em>label</em>, <em>unit</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.xaxis" title="Permalink to this definition">¶</a></dt> 
     366<dd><p>set the x axis label and unit</p> 
     367</dd></dl> 
     368 
     369<dl class="method"> 
     370<dt id="sans.fit.AbstractFitEngine.FitData2D.yaxis"> 
     371<tt class="descname">yaxis</tt><big>(</big><em>label</em>, <em>unit</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.yaxis" title="Permalink to this definition">¶</a></dt> 
     372<dd><p>set the y axis label and unit</p> 
     373</dd></dl> 
     374 
     375<dl class="method"> 
     376<dt id="sans.fit.AbstractFitEngine.FitData2D.zaxis"> 
     377<tt class="descname">zaxis</tt><big>(</big><em>label</em>, <em>unit</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitData2D.zaxis" title="Permalink to this definition">¶</a></dt> 
     378<dd><p>set the z axis label and unit</p> 
     379</dd></dl> 
     380 
     381</dd></dl> 
     382 
     383<dl class="class"> 
     384<dt id="sans.fit.AbstractFitEngine.FitEngine"> 
     385<em class="property">class </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">FitEngine</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitEngine" title="Permalink to this definition">¶</a></dt> 
     386<dd><dl class="method"> 
     387<dt id="sans.fit.AbstractFitEngine.FitEngine.get_model"> 
     388<tt class="descname">get_model</tt><big>(</big><em>id</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitEngine.get_model" title="Permalink to this definition">¶</a></dt> 
     389<dd><table class="docutils field-list" frame="void" rules="none"> 
     390<col class="field-name" /> 
     391<col class="field-body" /> 
     392<tbody valign="top"> 
     393<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>id</strong> &#8211; id is key in the dictionary containing the model to return</td> 
     394</tr> 
     395<tr class="field"><th class="field-name">Returns:</th><td class="field-body">a model at this id or None if no FitArrange element was  
     396created with this id</td> 
     397</tr> 
     398</tbody> 
     399</table> 
     400</dd></dl> 
     401 
     402<dl class="method"> 
     403<dt id="sans.fit.AbstractFitEngine.FitEngine.get_problem_to_fit"> 
     404<tt class="descname">get_problem_to_fit</tt><big>(</big><em>id</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitEngine.get_problem_to_fit" title="Permalink to this definition">¶</a></dt> 
     405<dd><p>return the self.selected value of the fit problem of id</p> 
     406<table class="docutils field-list" frame="void" rules="none"> 
     407<col class="field-name" /> 
     408<col class="field-body" /> 
     409<tbody valign="top"> 
     410<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>id</strong> &#8211; the id of the problem</td> 
     411</tr> 
     412</tbody> 
     413</table> 
     414</dd></dl> 
     415 
     416<dl class="method"> 
     417<dt id="sans.fit.AbstractFitEngine.FitEngine.remove_fit_problem"> 
     418<tt class="descname">remove_fit_problem</tt><big>(</big><em>id</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitEngine.remove_fit_problem" title="Permalink to this definition">¶</a></dt> 
     419<dd><p>remove   fitarrange in id</p> 
     420</dd></dl> 
     421 
     422<dl class="method"> 
     423<dt id="sans.fit.AbstractFitEngine.FitEngine.select_problem_for_fit"> 
     424<tt class="descname">select_problem_for_fit</tt><big>(</big><em>id</em>, <em>value</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitEngine.select_problem_for_fit" title="Permalink to this definition">¶</a></dt> 
     425<dd><p>select a couple of model and data at the id position in dictionary 
     426and set in self.selected value to value</p> 
     427<table class="docutils field-list" frame="void" rules="none"> 
     428<col class="field-name" /> 
     429<col class="field-body" /> 
     430<tbody valign="top"> 
     431<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>value</strong> &#8211; the value to allow fitting.  
     432can only have the value one or zero</td> 
     433</tr> 
     434</tbody> 
     435</table> 
     436</dd></dl> 
     437 
     438<dl class="method"> 
     439<dt id="sans.fit.AbstractFitEngine.FitEngine.set_data"> 
     440<tt class="descname">set_data</tt><big>(</big><em>data</em>, <em>id</em>, <em>smearer=None</em>, <em>qmin=None</em>, <em>qmax=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitEngine.set_data" title="Permalink to this definition">¶</a></dt> 
     441<dd><p>Receives plottable, creates a list of data to fit,set data 
     442in a FitArrange object and adds that object in a dictionary  
     443with key id.</p> 
     444<table class="docutils field-list" frame="void" rules="none"> 
     445<col class="field-name" /> 
     446<col class="field-body" /> 
     447<tbody valign="top"> 
     448<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> 
     449<li><strong>data</strong> &#8211; data added</li> 
     450<li><strong>id</strong> &#8211; unique key corresponding to a fitArrange object with data</li> 
     451</ul> 
     452</td> 
     453</tr> 
     454</tbody> 
     455</table> 
     456</dd></dl> 
     457 
     458<dl class="method"> 
     459<dt id="sans.fit.AbstractFitEngine.FitEngine.set_model"> 
     460<tt class="descname">set_model</tt><big>(</big><em>model</em>, <em>id</em>, <em>pars=</em><span class="optional">[</span><span class="optional">]</span>, <em>constraints=</em><span class="optional">[</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.FitEngine.set_model" title="Permalink to this definition">¶</a></dt> 
     461<dd><p>set a model on a given  in the fit engine.</p> 
     462<table class="docutils field-list" frame="void" rules="none"> 
     463<col class="field-name" /> 
     464<col class="field-body" /> 
     465<tbody valign="top"> 
     466<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>model</strong> &#8211; sans.models type</td> 
     467</tr> 
     468</tbody> 
     469</table> 
     470<dl class="docutils"> 
     471<dt>:param <span class="classifier-delimiter">:</span> <span class="classifier">is the key of the fitArrange dictionary where model is </span></dt> 
     472<dd>saved as a value</dd> 
     473</dl> 
     474<table class="docutils field-list" frame="void" rules="none"> 
     475<col class="field-name" /> 
     476<col class="field-body" /> 
     477<tbody valign="top"> 
     478<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple"> 
     479<li><strong>pars</strong> &#8211; the list of parameters to fit</li> 
     480<li><strong>constraints</strong> &#8211; <p>list of  
     481tuple (name of parameter, value of parameters) 
     482the value of parameter must be a string to constraint 2 different 
     483parameters. 
     484Example:   
     485we want to fit 2 model M1 and M2 both have parameters A and B. 
     486constraints can be:</p> 
     487<blockquote> 
     488<div>constraints = [(M1.A, M2.B+2), (M1.B= M2.A <a href="#id1"><span class="problematic" id="id2">*</span></a>5),...,]</div></blockquote> 
     489</li> 
     490</ul> 
     491</td> 
     492</tr> 
     493<tr class="field"><th class="field-name">Note :</th><td class="field-body"><p class="first last">pars must contains only name of existing model&#8217;s parameters</p> 
     494</td> 
     495</tr> 
     496</tbody> 
     497</table> 
     498</dd></dl> 
     499 
     500</dd></dl> 
     501 
     502<dl class="class"> 
     503<dt id="sans.fit.AbstractFitEngine.Model"> 
     504<em class="property">class </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">Model</tt><big>(</big><em>sans_model</em>, <em>**kw</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.Model" title="Permalink to this definition">¶</a></dt> 
     505<dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">park.model.Model</span></tt></p> 
     506<p>PARK wrapper for SANS models.</p> 
     507<dl class="method"> 
     508<dt id="sans.fit.AbstractFitEngine.Model.eval"> 
     509<tt class="descname">eval</tt><big>(</big><em>x</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.Model.eval" title="Permalink to this definition">¶</a></dt> 
     510<dd><p>override eval method of park model.</p> 
     511<table class="docutils field-list" frame="void" rules="none"> 
     512<col class="field-name" /> 
     513<col class="field-body" /> 
     514<tbody valign="top"> 
     515<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>x</strong> &#8211; the x value used to compute a function</td> 
     516</tr> 
     517</tbody> 
     518</table> 
     519</dd></dl> 
     520 
     521<dl class="method"> 
     522<dt id="sans.fit.AbstractFitEngine.Model.eval_derivs"> 
     523<tt class="descname">eval_derivs</tt><big>(</big><em>x</em>, <em>pars=</em><span class="optional">[</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.Model.eval_derivs" title="Permalink to this definition">¶</a></dt> 
     524<dd><p>Evaluate the model and derivatives wrt pars at x.</p> 
     525<p>pars is a list of the names of the parameters for which derivatives 
     526are desired.</p> 
     527<p>This method needs to be specialized in the model to evaluate the 
     528model function.  Alternatively, the model can implement is own 
     529version of residuals which calculates the residuals directly 
     530instead of calling eval.</p> 
     531</dd></dl> 
     532 
     533<dl class="method"> 
     534<dt id="sans.fit.AbstractFitEngine.Model.get_params"> 
     535<tt class="descname">get_params</tt><big>(</big><em>fitparams</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.Model.get_params" title="Permalink to this definition">¶</a></dt> 
     536<dd><p>return a list of value of paramter to fit</p> 
     537<table class="docutils field-list" frame="void" rules="none"> 
     538<col class="field-name" /> 
     539<col class="field-body" /> 
     540<tbody valign="top"> 
     541<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>fitparams</strong> &#8211; list of paramaters name to fit</td> 
     542</tr> 
     543</tbody> 
     544</table> 
     545</dd></dl> 
     546 
     547<dl class="method"> 
     548<dt id="sans.fit.AbstractFitEngine.Model.set"> 
     549<tt class="descname">set</tt><big>(</big><em>**kw</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.Model.set" title="Permalink to this definition">¶</a></dt> 
     550<dd><p>Set the initial value for a set of parameters.</p> 
     551<p>E.g., model.set(width=3,center=5)</p> 
     552</dd></dl> 
     553 
     554<dl class="method"> 
     555<dt id="sans.fit.AbstractFitEngine.Model.set_params"> 
     556<tt class="descname">set_params</tt><big>(</big><em>paramlist</em>, <em>params</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.Model.set_params" title="Permalink to this definition">¶</a></dt> 
     557<dd><p>Set value for parameters to fit</p> 
     558<table class="docutils field-list" frame="void" rules="none"> 
     559<col class="field-name" /> 
     560<col class="field-body" /> 
     561<tbody valign="top"> 
     562<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>params</strong> &#8211; list of value for parameters to fit</td> 
     563</tr> 
     564</tbody> 
     565</table> 
     566</dd></dl> 
     567 
     568</dd></dl> 
     569 
     570<dl class="class"> 
     571<dt id="sans.fit.AbstractFitEngine.SansAssembly"> 
     572<em class="property">class </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">SansAssembly</tt><big>(</big><em>paramlist</em>, <em>model=None</em>, <em>data=None</em>, <em>fitresult=None</em>, <em>handler=None</em>, <em>curr_thread=None</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansAssembly" title="Permalink to this definition">¶</a></dt> 
     573<dd><p>Sans Assembly class a class wrapper to be call in optimizer.leastsq method</p> 
     574<dl class="method"> 
     575<dt id="sans.fit.AbstractFitEngine.SansAssembly.check_param_range"> 
     576<tt class="descname">check_param_range</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansAssembly.check_param_range" title="Permalink to this definition">¶</a></dt> 
     577<dd><p>Check the lower and upper bound of the parameter value 
     578and set res to the inf if the value is outside of the 
     579range 
     580:limitation: the initial values must be within range.</p> 
     581</dd></dl> 
     582 
     583<dl class="method"> 
     584<dt id="sans.fit.AbstractFitEngine.SansAssembly.chisq"> 
     585<tt class="descname">chisq</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansAssembly.chisq" title="Permalink to this definition">¶</a></dt> 
     586<dd><p>Calculates chi^2</p> 
     587<table class="docutils field-list" frame="void" rules="none"> 
     588<col class="field-name" /> 
     589<col class="field-body" /> 
     590<tbody valign="top"> 
     591<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>params</strong> &#8211; list of parameter values</td> 
     592</tr> 
     593<tr class="field"><th class="field-name">Returns:</th><td class="field-body">chi^2</td> 
     594</tr> 
     595</tbody> 
     596</table> 
     597</dd></dl> 
     598 
     599</dd></dl> 
     600 
     601<dl class="class"> 
     602<dt id="sans.fit.AbstractFitEngine.SansParameter"> 
     603<em class="property">class </em><tt class="descclassname">sans.fit.AbstractFitEngine.</tt><tt class="descname">SansParameter</tt><big>(</big><em>name</em>, <em>model</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter" title="Permalink to this definition">¶</a></dt> 
     604<dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">park.parameter.Parameter</span></tt></p> 
     605<p>SANS model parameters for use in the PARK fitting service. 
     606The parameter attribute value is redirected to the underlying 
     607parameter value in the SANS model.</p> 
     608<dl class="method"> 
     609<dt id="sans.fit.AbstractFitEngine.SansParameter.get"> 
     610<tt class="descname">get</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.get" title="Permalink to this definition">¶</a></dt> 
     611<dd><p>Return the current value for a parameter.</p> 
     612</dd></dl> 
     613 
     614<dl class="method"> 
     615<dt id="sans.fit.AbstractFitEngine.SansParameter.get_name"> 
     616<tt class="descname">get_name</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.get_name" title="Permalink to this definition">¶</a></dt> 
     617<dd></dd></dl> 
     618 
     619<dl class="method"> 
     620<dt id="sans.fit.AbstractFitEngine.SansParameter.iscomputed"> 
     621<tt class="descname">iscomputed</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.iscomputed" title="Permalink to this definition">¶</a></dt> 
     622<dd></dd></dl> 
     623 
     624<dl class="method"> 
     625<dt id="sans.fit.AbstractFitEngine.SansParameter.isfeasible"> 
     626<tt class="descname">isfeasible</tt><big>(</big><em>value</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.isfeasible" title="Permalink to this definition">¶</a></dt> 
     627<dd><p>Return true if the value is in the range</p> 
     628</dd></dl> 
     629 
     630<dl class="method"> 
     631<dt id="sans.fit.AbstractFitEngine.SansParameter.isfitted"> 
     632<tt class="descname">isfitted</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.isfitted" title="Permalink to this definition">¶</a></dt> 
     633<dd></dd></dl> 
     634 
     635<dl class="method"> 
     636<dt id="sans.fit.AbstractFitEngine.SansParameter.isfixed"> 
     637<tt class="descname">isfixed</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.isfixed" title="Permalink to this definition">¶</a></dt> 
     638<dd></dd></dl> 
     639 
     640<dl class="method"> 
     641<dt id="sans.fit.AbstractFitEngine.SansParameter.isrestrained"> 
     642<tt class="descname">isrestrained</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.isrestrained" title="Permalink to this definition">¶</a></dt> 
     643<dd></dd></dl> 
     644 
     645<dl class="attribute"> 
     646<dt id="sans.fit.AbstractFitEngine.SansParameter.name"> 
     647<tt class="descname">name</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.name" title="Permalink to this definition">¶</a></dt> 
     648<dd><p>parameter name</p> 
     649</dd></dl> 
     650 
     651<dl class="attribute"> 
     652<dt id="sans.fit.AbstractFitEngine.SansParameter.range"> 
     653<tt class="descname">range</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.range" title="Permalink to this definition">¶</a></dt> 
     654<dd><p>Override _getrange of park parameter 
     655return the range of parameter</p> 
     656</dd></dl> 
     657 
     658<dl class="method"> 
     659<dt id="sans.fit.AbstractFitEngine.SansParameter.set"> 
     660<tt class="descname">set</tt><big>(</big><em>value</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.set" title="Permalink to this definition">¶</a></dt> 
     661<dd><p>Set a parameter to a value, a range or an expression.  If it is a value, 
     662the parameter will be fixed for the fit.  If it is a range, the value 
     663will be varying for the fit.  If it is an expression, the parameter will 
     664be calculated from the values of other parameters in the fit.</p> 
     665<p>Raises ValueError if the value could not be interpreted.</p> 
     666</dd></dl> 
     667 
     668<dl class="method"> 
     669<dt id="sans.fit.AbstractFitEngine.SansParameter.setprefix"> 
     670<tt class="descname">setprefix</tt><big>(</big><em>prefix</em><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.setprefix" title="Permalink to this definition">¶</a></dt> 
     671<dd><p>Set the full path to the parameter as used in expressions involving 
     672the parameter name.</p> 
     673</dd></dl> 
     674 
     675<dl class="method"> 
     676<dt id="sans.fit.AbstractFitEngine.SansParameter.summarize"> 
     677<tt class="descname">summarize</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.summarize" title="Permalink to this definition">¶</a></dt> 
     678<dd><p>Return parameter range string.</p> 
     679<p>E.g.,  &#8221;       Gold .....|.... 5.2043 in [2,7]&#8221;</p> 
     680</dd></dl> 
     681 
     682<dl class="attribute"> 
     683<dt id="sans.fit.AbstractFitEngine.SansParameter.value"> 
     684<tt class="descname">value</tt><a class="headerlink" href="#sans.fit.AbstractFitEngine.SansParameter.value" title="Permalink to this definition">¶</a></dt> 
     685<dd><p>override the _getvalue of park parameter</p> 
     686<p>:return value the parameter associates with self.name</p> 
     687</dd></dl> 
     688 
     689</dd></dl> 
     690 
    57691</div> 
    58692</div> 
    … …  
    67701  <ul> 
    68702<li><a class="reference internal" href="#">AbstractFitEngine</a><ul> 
    69 <li><a class="reference internal" href="#mod-sans-fit-abstractfitengine">:mod:` sans.fit.AbstractFitEngine`</a></li> 
     703<li><a class="reference internal" href="#module-sans.fit.AbstractFitEngine">:mod:` sans.fit.AbstractFitEngine`</a></li> 
    70704</ul> 
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  • park_integration/docs/sphinx/_build/html/api/ScipyFitting.html

    r41517a6 r1679f2f  
    3535             accesskey="I">index</a></li> 
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    … …  
    4952  <div class="section" id="scipyfitting"> 
    5053<h1>ScipyFitting<a class="headerlink" href="#scipyfitting" title="Permalink to this headline">¶</a></h1> 
    51 <div class="section" id="mod-sans-fit-scipyfitting"> 
    52 <h2>:mod:` sans.fit.ScipyFitting`<a class="headerlink" href="#mod-sans-fit-scipyfitting" title="Permalink to this headline">¶</a></h2> 
     54<div class="section" id="module-sans.fit.ScipyFitting"> 
     55<span id="mod-sans-fit-scipyfitting"></span><h2>:mod:` sans.fit.ScipyFitting`<a class="headerlink" href="#module-sans.fit.ScipyFitting" title="Permalink to this headline">¶</a></h2> 
     56<p>ScipyFitting module contains FitArrange , ScipyFit, 
     57Parameter classes.All listed classes work together to perform a  
     58simple fit with scipy optimizer.</p> 
     59<dl class="class"> 
     60<dt id="sans.fit.ScipyFitting.ScipyFit"> 
     61<em class="property">class </em><tt class="descclassname">sans.fit.ScipyFitting.</tt><tt class="descname">ScipyFit</tt><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit" title="Permalink to this definition">¶</a></dt> 
     62<dd><p>Bases: <a class="reference internal" href="AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine" title="sans.fit.AbstractFitEngine.FitEngine"><tt class="xref py py-class docutils literal"><span class="pre">sans.fit.AbstractFitEngine.FitEngine</span></tt></a></p> 
     63<p>ScipyFit performs the Fit.This class can be used as follow: 
     64#Do the fit SCIPY 
     65create an engine: engine = ScipyFit() 
     66Use data must be of type plottable 
     67Use a sans model</p> 
     68<p>Add data with a dictionnary of FitArrangeDict where Uid is a key and data 
     69is saved in FitArrange object. 
     70engine.set_data(data,Uid)</p> 
     71<p>Set model parameter &#8220;M1&#8221;= model.name add {model.parameter.name:value}.</p> 
     72<table class="docutils field-list" frame="void" rules="none"> 
     73<col class="field-name" /> 
     74<col class="field-body" /> 
     75<tbody valign="top"> 
     76<tr class="field"><th class="field-name">Note :</th><td class="field-body">Set_param() if used must always preceded set_model() 
     77for the fit to be performed.In case of Scipyfit set_param is called in 
     78fit () automatically.</td> 
     79</tr> 
     80</tbody> 
     81</table> 
     82<p>engine.set_param( model,&#8221;M1&#8221;, {&#8216;A&#8217;:2,&#8217;B&#8217;:4})</p> 
     83<p>Add model with a dictionnary of FitArrangeDict{} where Uid is a key and model 
     84is save in FitArrange object. 
     85engine.set_model(model,Uid)</p> 
     86<p>engine.fit return chisqr,[model.parameter 1,2,..],[[err1....][..err2...]] 
     87chisqr1, out1, cov1=engine.fit({model.parameter.name:value},qmin,qmax)</p> 
     88<dl class="method"> 
     89<dt id="sans.fit.ScipyFitting.ScipyFit.fit"> 
     90<tt class="descname">fit</tt><big>(</big><em>q=None</em>, <em>handler=None</em>, <em>curr_thread=None</em>, <em>ftol=1.49012e-008</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit.fit" title="Permalink to this definition">¶</a></dt> 
     91<dd></dd></dl> 
     92 
     93<dl class="method"> 
     94<dt id="sans.fit.ScipyFitting.ScipyFit.get_model"> 
     95<tt class="descname">get_model</tt><big>(</big><em>id</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit.get_model" title="Permalink to this definition">¶</a></dt> 
     96<dd><table class="docutils field-list" frame="void" rules="none"> 
     97<col class="field-name" /> 
     98<col class="field-body" /> 
     99<tbody valign="top"> 
     100<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>id</strong> &#8211; id is key in the dictionary containing the model to return</td> 
     101</tr> 
     102<tr class="field"><th class="field-name">Returns:</th><td class="field-body">a model at this id or None if no FitArrange element was  
     103created with this id</td> 
     104</tr> 
     105</tbody> 
     106</table> 
     107</dd></dl> 
     108 
     109<dl class="method"> 
     110<dt id="sans.fit.ScipyFitting.ScipyFit.get_problem_to_fit"> 
     111<tt class="descname">get_problem_to_fit</tt><big>(</big><em>id</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit.get_problem_to_fit" title="Permalink to this definition">¶</a></dt> 
     112<dd><p>return the self.selected value of the fit problem of id</p> 
     113<table class="docutils field-list" frame="void" rules="none"> 
     114<col class="field-name" /> 
     115<col class="field-body" /> 
     116<tbody valign="top"> 
     117<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>id</strong> &#8211; the id of the problem</td> 
     118</tr> 
     119</tbody> 
     120</table> 
     121</dd></dl> 
     122 
     123<dl class="method"> 
     124<dt id="sans.fit.ScipyFitting.ScipyFit.remove_fit_problem"> 
     125<tt class="descname">remove_fit_problem</tt><big>(</big><em>id</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit.remove_fit_problem" title="Permalink to this definition">¶</a></dt> 
     126<dd><p>remove   fitarrange in id</p> 
     127</dd></dl> 
     128 
     129<dl class="method"> 
     130<dt id="sans.fit.ScipyFitting.ScipyFit.select_problem_for_fit"> 
     131<tt class="descname">select_problem_for_fit</tt><big>(</big><em>id</em>, <em>value</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit.select_problem_for_fit" title="Permalink to this definition">¶</a></dt> 
     132<dd><p>select a couple of model and data at the id position in dictionary 
     133and set in self.selected value to value</p> 
     134<table class="docutils field-list" frame="void" rules="none"> 
     135<col class="field-name" /> 
     136<col class="field-body" /> 
     137<tbody valign="top"> 
     138<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>value</strong> &#8211; the value to allow fitting.  
     139can only have the value one or zero</td> 
     140</tr> 
     141</tbody> 
     142</table> 
     143</dd></dl> 
     144 
     145<dl class="method"> 
     146<dt id="sans.fit.ScipyFitting.ScipyFit.set_data"> 
     147<tt class="descname">set_data</tt><big>(</big><em>data</em>, <em>id</em>, <em>smearer=None</em>, <em>qmin=None</em>, <em>qmax=None</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit.set_data" title="Permalink to this definition">¶</a></dt> 
     148<dd><p>Receives plottable, creates a list of data to fit,set data 
     149in a FitArrange object and adds that object in a dictionary  
     150with key id.</p> 
     151<table class="docutils field-list" frame="void" rules="none"> 
     152<col class="field-name" /> 
     153<col class="field-body" /> 
     154<tbody valign="top"> 
     155<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple"> 
     156<li><strong>data</strong> &#8211; data added</li> 
     157<li><strong>id</strong> &#8211; unique key corresponding to a fitArrange object with data</li> 
     158</ul> 
     159</td> 
     160</tr> 
     161</tbody> 
     162</table> 
     163</dd></dl> 
     164 
     165<dl class="method"> 
     166<dt id="sans.fit.ScipyFitting.ScipyFit.set_model"> 
     167<tt class="descname">set_model</tt><big>(</big><em>model</em>, <em>id</em>, <em>pars=</em><span class="optional">[</span><span class="optional">]</span>, <em>constraints=</em><span class="optional">[</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.ScipyFit.set_model" title="Permalink to this definition">¶</a></dt> 
     168<dd><p>set a model on a given  in the fit engine.</p> 
     169<table class="docutils field-list" frame="void" rules="none"> 
     170<col class="field-name" /> 
     171<col class="field-body" /> 
     172<tbody valign="top"> 
     173<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><strong>model</strong> &#8211; sans.models type</td> 
     174</tr> 
     175</tbody> 
     176</table> 
     177<dl class="docutils"> 
     178<dt>:param <span class="classifier-delimiter">:</span> <span class="classifier">is the key of the fitArrange dictionary where model is </span></dt> 
     179<dd>saved as a value</dd> 
     180</dl> 
     181<table class="docutils field-list" frame="void" rules="none"> 
     182<col class="field-name" /> 
     183<col class="field-body" /> 
     184<tbody valign="top"> 
     185<tr class="field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple"> 
     186<li><strong>pars</strong> &#8211; the list of parameters to fit</li> 
     187<li><strong>constraints</strong> &#8211; <p>list of  
     188tuple (name of parameter, value of parameters) 
     189the value of parameter must be a string to constraint 2 different 
     190parameters. 
     191Example:   
     192we want to fit 2 model M1 and M2 both have parameters A and B. 
     193constraints can be:</p> 
     194<blockquote> 
     195<div>constraints = [(M1.A, M2.B+2), (M1.B= M2.A <a href="#id1"><span class="problematic" id="id2">*</span></a>5),...,]</div></blockquote> 
     196</li> 
     197</ul> 
     198</td> 
     199</tr> 
     200<tr class="field"><th class="field-name">Note :</th><td class="field-body"><p class="first last">pars must contains only name of existing model&#8217;s parameters</p> 
     201</td> 
     202</tr> 
     203</tbody> 
     204</table> 
     205</dd></dl> 
     206 
     207</dd></dl> 
     208 
     209<dl class="class"> 
     210<dt id="sans.fit.ScipyFitting.fitresult"> 
     211<em class="property">class </em><tt class="descclassname">sans.fit.ScipyFitting.</tt><tt class="descname">fitresult</tt><big>(</big><em>model=None</em>, <em>param_list=None</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.fitresult" title="Permalink to this definition">¶</a></dt> 
     212<dd><p>Bases: <tt class="xref py py-class docutils literal"><span class="pre">object</span></tt></p> 
     213<p>Storing fit result</p> 
     214<dl class="method"> 
     215<dt id="sans.fit.ScipyFitting.fitresult.print_summary"> 
     216<tt class="descname">print_summary</tt><big>(</big><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.fitresult.print_summary" title="Permalink to this definition">¶</a></dt> 
     217<dd></dd></dl> 
     218 
     219<dl class="method"> 
     220<dt id="sans.fit.ScipyFitting.fitresult.set_fitness"> 
     221<tt class="descname">set_fitness</tt><big>(</big><em>fitness</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.fitresult.set_fitness" title="Permalink to this definition">¶</a></dt> 
     222<dd></dd></dl> 
     223 
     224<dl class="method"> 
     225<dt id="sans.fit.ScipyFitting.fitresult.set_model"> 
     226<tt class="descname">set_model</tt><big>(</big><em>model</em><big>)</big><a class="headerlink" href="#sans.fit.ScipyFitting.fitresult.set_model" title="Permalink to this definition">¶</a></dt> 
     227<dd></dd></dl> 
     228 
     229</dd></dl> 
     230 
    53231</div> 
    54232</div> 
    … …  
    63241  <ul> 
    64242<li><a class="reference internal" href="#">ScipyFitting</a><ul> 
    65 <li><a class="reference internal" href="#mod-sans-fit-scipyfitting">:mod:` sans.fit.ScipyFitting`</a></li> 
     243<li><a class="reference internal" href="#module-sans.fit.ScipyFitting">:mod:` sans.fit.ScipyFitting`</a></li> 
    66244</ul> 
    67245</li> 
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     280          <a href="../py-modindex.html" title="Python Module Index" 
     281             >modules</a> |</li> 
     282        <li class="right" > 
    102283          <a href="ParkFitting.html" title="ParkFitting" 
    103284             >previous</a> |</li> 

  • park_integration/docs/sphinx/_build/html/api/index.html

    r41517a6 r1679f2f  
    3535             accesskey="I">index</a></li> 
    3636        <li class="right" > 
     37          <a href="../py-modindex.html" title="Python Module Index" 
     38             >modules</a> |</li> 
     39        <li class="right" > 
    3740          <a href="AbstractFitEngine.html" title="AbstractFitEngine" 
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    … …  
    6467<ul> 
    6568<li class="toctree-l1"><a class="reference internal" href="AbstractFitEngine.html">AbstractFitEngine</a><ul> 
    66 <li class="toctree-l2"><a class="reference internal" href="AbstractFitEngine.html#mod-sans-fit-abstractfitengine">:mod:` sans.fit.AbstractFitEngine`</a></li> 
     69<li class="toctree-l2"><a class="reference internal" href="AbstractFitEngine.html#module-sans.fit.AbstractFitEngine">:mod:` sans.fit.AbstractFitEngine`</a></li> 
    6770</ul> 
    6871</li> 
    … …  
    7679</li> 
    7780<li class="toctree-l1"><a class="reference internal" href="ScipyFitting.html">ScipyFitting</a><ul> 
    78 <li class="toctree-l2"><a class="reference internal" href="ScipyFitting.html#mod-sans-fit-scipyfitting">:mod:` sans.fit.ScipyFitting`</a></li> 
     81<li class="toctree-l2"><a class="reference internal" href="ScipyFitting.html#module-sans.fit.ScipyFitting">:mod:` sans.fit.ScipyFitting`</a></li> 
    7982</ul> 
    8083</li> 
    … …  
    124127             >index</a></li> 
    125128        <li class="right" > 
     129          <a href="../py-modindex.html" title="Python Module Index" 
     130             >modules</a> |</li> 
     131        <li class="right" > 
    126132          <a href="AbstractFitEngine.html" title="AbstractFitEngine" 
    127133             >next</a> |</li> 

  • park_integration/docs/sphinx/_build/html/genindex.html

    r41517a6 r1679f2f  
    3232          <a href="#" title="General Index" 
    3333             accesskey="I">index</a></li> 
     34        <li class="right" > 
     35          <a href="py-modindex.html" title="Python Module Index" 
     36             >modules</a> |</li> 
    3437        <li><a href="index.html">park_integration v0.1.0 documentation</a> &raquo;</li>  
    3538      </ul> 
    … …  
    4548 
    4649   <div class="genindex-jumpbox"> 
    47     
     50   <a href="#A"><strong>A</strong></a> | <a href="#C"><strong>C</strong></a> | <a href="#E"><strong>E</strong></a> | <a href="#F"><strong>F</strong></a> | <a href="#G"><strong>G</strong></a> | <a href="#I"><strong>I</strong></a> | <a href="#M"><strong>M</strong></a> | <a href="#N"><strong>N</strong></a> | <a href="#P"><strong>P</strong></a> | <a href="#R"><strong>R</strong></a> | <a href="#S"><strong>S</strong></a> | <a href="#V"><strong>V</strong></a> | <a href="#X"><strong>X</strong></a> | <a href="#Y"><strong>Y</strong></a> | <a href="#Z"><strong>Z</strong></a>  
    4851   </div> 
     52<h2 id="A">A</h2> 
     53<table style="width: 100%" class="indextable genindextable"><tr> 
     54  <td style="width: 33%" valign="top"><dl> 
     55    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange.add_data">add_data() (sans.fit.AbstractFitEngine.FitArrange method)</a></dt> 
     56    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.add_notes">add_notes() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     57    <dd><dl> 
     58      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.add_notes">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     59  </dl></dd> 
     60</dl></td> 
     61  <td style="width: 33%" valign="top"><dl> 
     62    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.append_empty_process">append_empty_process() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     63    <dd><dl> 
     64      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.append_empty_process">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     65  </dl></dd> 
     66    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitAbort.args">args (sans.fit.AbstractFitEngine.FitAbort attribute)</a></dt> 
     67</dl></td> 
     68</tr></table> 
     69 
     70<h2 id="C">C</h2> 
     71<table style="width: 100%" class="indextable genindextable"><tr> 
     72  <td style="width: 33%" valign="top"><dl> 
     73    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansAssembly.check_param_range">check_param_range() (sans.fit.AbstractFitEngine.SansAssembly method)</a></dt> 
     74    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansAssembly.chisq">chisq() (sans.fit.AbstractFitEngine.SansAssembly method)</a></dt> 
     75</dl></td> 
     76  <td style="width: 33%" valign="top"><dl> 
     77    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.clone_without_data">clone_without_data() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     78    <dd><dl> 
     79      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.clone_without_data">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     80  </dl></dd> 
     81</dl></td> 
     82</tr></table> 
     83 
     84<h2 id="E">E</h2> 
     85<table style="width: 100%" class="indextable genindextable"><tr> 
     86  <td style="width: 33%" valign="top"><dl> 
     87    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.Model.eval">eval() (sans.fit.AbstractFitEngine.Model method)</a></dt> 
     88</dl></td> 
     89  <td style="width: 33%" valign="top"><dl> 
     90    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.Model.eval_derivs">eval_derivs() (sans.fit.AbstractFitEngine.Model method)</a></dt> 
     91</dl></td> 
     92</tr></table> 
     93 
     94<h2 id="F">F</h2> 
     95<table style="width: 100%" class="indextable genindextable"><tr> 
     96  <td style="width: 33%" valign="top"><dl> 
     97    <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit.fit">fit() (sans.fit.ScipyFitting.ScipyFit method)</a></dt> 
     98    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitAbort">FitAbort</a></dt> 
     99    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange">FitArrange (class in sans.fit.AbstractFitEngine)</a></dt> 
     100    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D">FitData1D (class in sans.fit.AbstractFitEngine)</a></dt> 
     101</dl></td> 
     102  <td style="width: 33%" valign="top"><dl> 
     103    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D">FitData2D (class in sans.fit.AbstractFitEngine)</a></dt> 
     104    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine">FitEngine (class in sans.fit.AbstractFitEngine)</a></dt> 
     105    <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.fitresult">fitresult (class in sans.fit.ScipyFitting)</a></dt> 
     106</dl></td> 
     107</tr></table> 
     108 
     109<h2 id="G">G</h2> 
     110<table style="width: 100%" class="indextable genindextable"><tr> 
     111  <td style="width: 33%" valign="top"><dl> 
     112    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.get">get() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     113    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange.get_data">get_data() (sans.fit.AbstractFitEngine.FitArrange method)</a></dt> 
     114    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.get_fit_range">get_fit_range() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     115    <dd><dl> 
     116      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.get_fit_range">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     117  </dl></dd> 
     118    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange.get_model">get_model() (sans.fit.AbstractFitEngine.FitArrange method)</a></dt> 
     119    <dd><dl> 
     120      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine.get_model">(sans.fit.AbstractFitEngine.FitEngine method)</a></dt> 
     121      <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit.get_model">(sans.fit.ScipyFitting.ScipyFit method)</a></dt> 
     122  </dl></dd> 
     123</dl></td> 
     124  <td style="width: 33%" valign="top"><dl> 
     125    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.get_name">get_name() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     126    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.Model.get_params">get_params() (sans.fit.AbstractFitEngine.Model method)</a></dt> 
     127    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine.get_problem_to_fit">get_problem_to_fit() (sans.fit.AbstractFitEngine.FitEngine method)</a></dt> 
     128    <dd><dl> 
     129      <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit.get_problem_to_fit">(sans.fit.ScipyFitting.ScipyFit method)</a></dt> 
     130  </dl></dd> 
     131    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange.get_to_fit">get_to_fit() (sans.fit.AbstractFitEngine.FitArrange method)</a></dt> 
     132</dl></td> 
     133</tr></table> 
     134 
     135<h2 id="I">I</h2> 
     136<table style="width: 100%" class="indextable genindextable"><tr> 
     137  <td style="width: 33%" valign="top"><dl> 
     138    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.is_slit_smeared">is_slit_smeared() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     139    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.iscomputed">iscomputed() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     140    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.isfeasible">isfeasible() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     141</dl></td> 
     142  <td style="width: 33%" valign="top"><dl> 
     143    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.isfitted">isfitted() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     144    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.isfixed">isfixed() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     145    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.isrestrained">isrestrained() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     146</dl></td> 
     147</tr></table> 
     148 
     149<h2 id="M">M</h2> 
     150<table style="width: 100%" class="indextable genindextable"><tr> 
     151  <td style="width: 33%" valign="top"><dl> 
     152    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitAbort.message">message (sans.fit.AbstractFitEngine.FitAbort attribute)</a></dt> 
     153</dl></td> 
     154  <td style="width: 33%" valign="top"><dl> 
     155    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.Model">Model (class in sans.fit.AbstractFitEngine)</a></dt> 
     156</dl></td> 
     157</tr></table> 
     158 
     159<h2 id="N">N</h2> 
     160<table style="width: 100%" class="indextable genindextable"><tr> 
     161  <td style="width: 33%" valign="top"><dl> 
     162    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.name">name (sans.fit.AbstractFitEngine.SansParameter attribute)</a></dt> 
     163</dl></td> 
     164</tr></table> 
     165 
     166<h2 id="P">P</h2> 
     167<table style="width: 100%" class="indextable genindextable"><tr> 
     168  <td style="width: 33%" valign="top"><dl> 
     169    <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.fitresult.print_summary">print_summary() (sans.fit.ScipyFitting.fitresult method)</a></dt> 
     170</dl></td> 
     171</tr></table> 
     172 
     173<h2 id="R">R</h2> 
     174<table style="width: 100%" class="indextable genindextable"><tr> 
     175  <td style="width: 33%" valign="top"><dl> 
     176    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.range">range (sans.fit.AbstractFitEngine.SansParameter attribute)</a></dt> 
     177    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange.remove_data">remove_data() (sans.fit.AbstractFitEngine.FitArrange method)</a></dt> 
     178    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine.remove_fit_problem">remove_fit_problem() (sans.fit.AbstractFitEngine.FitEngine method)</a></dt> 
     179    <dd><dl> 
     180      <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit.remove_fit_problem">(sans.fit.ScipyFitting.ScipyFit method)</a></dt> 
     181  </dl></dd> 
     182</dl></td> 
     183  <td style="width: 33%" valign="top"><dl> 
     184    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.residuals">residuals() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     185    <dd><dl> 
     186      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.residuals">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     187  </dl></dd> 
     188    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.residuals_deriv">residuals_deriv() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     189    <dd><dl> 
     190      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.residuals_deriv">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     191  </dl></dd> 
     192</dl></td> 
     193</tr></table> 
     194 
     195<h2 id="S">S</h2> 
     196<table style="width: 100%" class="indextable genindextable"><tr> 
     197  <td style="width: 33%" valign="top"><dl> 
     198    <dt><a href="api/AbstractFitEngine.html#module-sans.fit.AbstractFitEngine">sans.fit.AbstractFitEngine (module)</a></dt> 
     199    <dt><a href="api/ScipyFitting.html#module-sans.fit.ScipyFitting">sans.fit.ScipyFitting (module)</a></dt> 
     200    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansAssembly">SansAssembly (class in sans.fit.AbstractFitEngine)</a></dt> 
     201    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter">SansParameter (class in sans.fit.AbstractFitEngine)</a></dt> 
     202    <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit">ScipyFit (class in sans.fit.ScipyFitting)</a></dt> 
     203    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine.select_problem_for_fit">select_problem_for_fit() (sans.fit.AbstractFitEngine.FitEngine method)</a></dt> 
     204    <dd><dl> 
     205      <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit.select_problem_for_fit">(sans.fit.ScipyFitting.ScipyFit method)</a></dt> 
     206  </dl></dd> 
     207    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.Model.set">set() (sans.fit.AbstractFitEngine.Model method)</a></dt> 
     208    <dd><dl> 
     209      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.set">(sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     210  </dl></dd> 
     211    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.set_data">set_data() (sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     212    <dd><dl> 
     213      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine.set_data">(sans.fit.AbstractFitEngine.FitEngine method)</a></dt> 
     214      <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit.set_data">(sans.fit.ScipyFitting.ScipyFit method)</a></dt> 
     215  </dl></dd> 
     216</dl></td> 
     217  <td style="width: 33%" valign="top"><dl> 
     218    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.set_fit_range">set_fit_range() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     219    <dd><dl> 
     220      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.set_fit_range">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     221  </dl></dd> 
     222    <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.fitresult.set_fitness">set_fitness() (sans.fit.ScipyFitting.fitresult method)</a></dt> 
     223    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange.set_model">set_model() (sans.fit.AbstractFitEngine.FitArrange method)</a></dt> 
     224    <dd><dl> 
     225      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitEngine.set_model">(sans.fit.AbstractFitEngine.FitEngine method)</a></dt> 
     226      <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.ScipyFit.set_model">(sans.fit.ScipyFitting.ScipyFit method)</a></dt> 
     227      <dt><a href="api/ScipyFitting.html#sans.fit.ScipyFitting.fitresult.set_model">(sans.fit.ScipyFitting.fitresult method)</a></dt> 
     228  </dl></dd> 
     229    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.Model.set_params">set_params() (sans.fit.AbstractFitEngine.Model method)</a></dt> 
     230    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.set_smearer">set_smearer() (sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     231    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitArrange.set_to_fit">set_to_fit() (sans.fit.AbstractFitEngine.FitArrange method)</a></dt> 
     232    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.setprefix">setprefix() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     233    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.summarize">summarize() (sans.fit.AbstractFitEngine.SansParameter method)</a></dt> 
     234</dl></td> 
     235</tr></table> 
     236 
     237<h2 id="V">V</h2> 
     238<table style="width: 100%" class="indextable genindextable"><tr> 
     239  <td style="width: 33%" valign="top"><dl> 
     240    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.SansParameter.value">value (sans.fit.AbstractFitEngine.SansParameter attribute)</a></dt> 
     241</dl></td> 
     242</tr></table> 
     243 
     244<h2 id="X">X</h2> 
     245<table style="width: 100%" class="indextable genindextable"><tr> 
     246  <td style="width: 33%" valign="top"><dl> 
     247    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.xaxis">xaxis() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     248    <dd><dl> 
     249      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.xaxis">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     250  </dl></dd> 
     251</dl></td> 
     252</tr></table> 
     253 
     254<h2 id="Y">Y</h2> 
     255<table style="width: 100%" class="indextable genindextable"><tr> 
     256  <td style="width: 33%" valign="top"><dl> 
     257    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData1D.yaxis">yaxis() (sans.fit.AbstractFitEngine.FitData1D method)</a></dt> 
     258    <dd><dl> 
     259      <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.yaxis">(sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     260  </dl></dd> 
     261</dl></td> 
     262</tr></table> 
     263 
     264<h2 id="Z">Z</h2> 
     265<table style="width: 100%" class="indextable genindextable"><tr> 
     266  <td style="width: 33%" valign="top"><dl> 
     267    <dt><a href="api/AbstractFitEngine.html#sans.fit.AbstractFitEngine.FitData2D.zaxis">zaxis() (sans.fit.AbstractFitEngine.FitData2D method)</a></dt> 
     268</dl></td> 
     269</tr></table> 
     270 
    49271 
    50272 
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  • pr_inversion/docs/sphinx/_build/html/api/index.html

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    6060<tr class="field"><th class="field-name">Release:</th><td class="field-body">0.1</td> 
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     62<tr class="field"><th class="field-name">Date:</th><td class="field-body">August 12, 2011</td> 
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  • pr_inversion/docs/sphinx/_build/html/searchindex.js

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  • sansinvariant/docs/sphinx/_build/html/_sources/api/index.txt

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    1515 
    1616   invariant.rst 
     17   invariant_mapper.rst 

  • sansinvariant/docs/sphinx/_build/html/api/index.html

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    6060<tr class="field"><th class="field-name">Release:</th><td class="field-body">0.1.0</td> 
    6161</tr> 
    62 <tr class="field"><th class="field-name">Date:</th><td class="field-body">August 08, 2011</td> 
     62<tr class="field"><th class="field-name">Date:</th><td class="field-body">August 12, 2011</td> 
    6363</tr> 
    6464</tbody> 
    … …  
    6868<li class="toctree-l1"><a class="reference internal" href="invariant.html">invariant</a><ul> 
    6969<li class="toctree-l2"><a class="reference internal" href="invariant.html#module-sans.invariant.invariant"><tt class="docutils literal"><span class="pre">sans.invariant.invariant</span></tt></a></li> 
     70</ul> 
     71</li> 
     72<li class="toctree-l1"><a class="reference internal" href="invariant_mapper.html">invariant_mapper</a><ul> 
     73<li class="toctree-l2"><a class="reference internal" href="invariant_mapper.html#module-sans.invariant.invariant_mapper"><tt class="docutils literal"><span class="pre">sans.invariant.invariant_mapper</span></tt></a></li> 
    7074</ul> 
    7175</li> 

  • sansinvariant/docs/sphinx/_build/html/api/invariant.html

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    2525    <link rel="top" title="invariant v0.1.0 documentation" href="../index.html" /> 
    2626    <link rel="up" title="Reference" href="index.html" /> 
     27    <link rel="next" title="invariant_mapper" href="invariant_mapper.html" /> 
    2728    <link rel="prev" title="Reference" href="index.html" />  
    2829  </head> 
    … …  
    3839             >modules</a> |</li> 
    3940        <li class="right" > 
     41          <a href="invariant_mapper.html" title="invariant_mapper" 
     42             accesskey="N">next</a> |</li> 
     43        <li class="right" > 
    4044          <a href="index.html" title="Reference" 
    4145             accesskey="P">previous</a> |</li> 
    … …  
    654658  <p class="topless"><a href="index.html" 
    655659                        title="previous chapter">Reference</a></p> 
     660  <h4>Next topic</h4> 
     661  <p class="topless"><a href="invariant_mapper.html" 
     662                        title="next chapter">invariant_mapper</a></p> 
    656663  <h3>This Page</h3> 
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    686693             >modules</a> |</li> 
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  • sansinvariant/docs/sphinx/_build/html/genindex.html

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    9393    <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_extra_data_low">get_extra_data_low() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    9494    <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_extrapolation_power">get_extrapolation_power() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    95     <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_qstar">get_qstar() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     95    <dt><a href="api/invariant_mapper.html#sans.invariant.invariant_mapper.get_qstar">get_qstar() (in module sans.invariant.invariant_mapper)</a></dt> 
     96    <dd><dl> 
     97      <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_qstar">(sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     98  </dl></dd> 
    9699    <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_qstar_high">get_qstar_high() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    97100</dl></td> 
    98101  <td style="width: 33%" valign="top"><dl> 
    99102    <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_qstar_low">get_qstar_low() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    100     <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_qstar_with_error">get_qstar_with_error() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    101     <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_surface">get_surface() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    102     <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_surface_with_error">get_surface_with_error() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    103     <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_volume_fraction">get_volume_fraction() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
    104     <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_volume_fraction_with_error">get_volume_fraction_with_error() (sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     103    <dt><a href="api/invariant_mapper.html#sans.invariant.invariant_mapper.get_qstar_with_error">get_qstar_with_error() (in module sans.invariant.invariant_mapper)</a></dt> 
     104    <dd><dl> 
     105      <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_qstar_with_error">(sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     106  </dl></dd> 
     107    <dt><a href="api/invariant_mapper.html#sans.invariant.invariant_mapper.get_surface">get_surface() (in module sans.invariant.invariant_mapper)</a></dt> 
     108    <dd><dl> 
     109      <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_surface">(sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     110  </dl></dd> 
     111    <dt><a href="api/invariant_mapper.html#sans.invariant.invariant_mapper.get_surface_with_error">get_surface_with_error() (in module sans.invariant.invariant_mapper)</a></dt> 
     112    <dd><dl> 
     113      <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_surface_with_error">(sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     114  </dl></dd> 
     115    <dt><a href="api/invariant_mapper.html#sans.invariant.invariant_mapper.get_volume_fraction">get_volume_fraction() (in module sans.invariant.invariant_mapper)</a></dt> 
     116    <dd><dl> 
     117      <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_volume_fraction">(sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     118  </dl></dd> 
     119    <dt><a href="api/invariant_mapper.html#sans.invariant.invariant_mapper.get_volume_fraction_with_error">get_volume_fraction_with_error() (in module sans.invariant.invariant_mapper)</a></dt> 
     120    <dd><dl> 
     121      <dt><a href="api/invariant.html#sans.invariant.invariant.InvariantCalculator.get_volume_fraction_with_error">(sans.invariant.invariant.InvariantCalculator method)</a></dt> 
     122  </dl></dd> 
    105123    <dt><a href="api/invariant.html#sans.invariant.invariant.Guinier">Guinier (class in sans.invariant.invariant)</a></dt> 
    106124</dl></td> 
    … …  
    143161  <td style="width: 33%" valign="top"><dl> 
    144162    <dt><a href="api/invariant.html#module-sans.invariant.invariant">sans.invariant.invariant (module)</a></dt> 
     163    <dt><a href="api/invariant_mapper.html#module-sans.invariant.invariant_mapper">sans.invariant.invariant_mapper (module)</a></dt> 
    145164</dl></td> 
    146165  <td style="width: 33%" valign="top"><dl> 

  • sansinvariant/docs/sphinx/_build/html/index.html

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    5555<li class="toctree-l1"><a class="reference internal" href="api/index.html">Reference</a><ul> 
    5656<li class="toctree-l2"><a class="reference internal" href="api/invariant.html">invariant</a></li> 
     57<li class="toctree-l2"><a class="reference internal" href="api/invariant_mapper.html">invariant_mapper</a></li> 
    5758</ul> 
    5859</li> 

  • sansinvariant/docs/sphinx/_build/html/py-modindex.html

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    6969       <a href="api/invariant.html#module-sans.invariant.invariant"><tt class="xref">sans.invariant.invariant</tt></a></td><td> 
    7070       <em></em></td></tr> 
     71     <tr class="cg-1"> 
     72       <td></td> 
     73       <td>&nbsp;&nbsp;&nbsp; 
     74       <a href="api/invariant_mapper.html#module-sans.invariant.invariant_mapper"><tt class="xref">sans.invariant.invariant_mapper</tt></a></td><td> 
     75       <em></em></td></tr> 
    7176   </table> 
    7277 

  • sansinvariant/docs/sphinx/_build/html/searchindex.js

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