1 | /** \file points_model.h child class of SASmodel*/ |
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2 | |
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3 | #ifndef POINTSMODEL_H |
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4 | #define POINTSMODEL_H |
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5 | |
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6 | #include <vector> |
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7 | #include "tnt/tnt.h" |
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8 | #include <string> |
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9 | #include "Point3D.h" |
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10 | #include "iq.h" |
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11 | #include "sas_model.h" |
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12 | |
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13 | using namespace std; |
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14 | |
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15 | class PointsModel : public SASModel{ |
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16 | public: |
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17 | PointsModel(); |
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18 | virtual ~PointsModel(); |
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19 | |
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20 | void CalculateIQ(IQ *iq); |
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21 | double CalculateIQ(double q); |
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22 | double CalculateIQError(double q); |
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23 | |
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24 | // Old lengthy 2D simulation (unchecked) |
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25 | void CalculateIQ_2D(IQ *iq,double phi); |
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26 | double CalculateIQ_2D(double qx, double qy); |
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27 | |
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28 | // Fast 2D simulation |
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29 | double CalculateIQ_2D(const vector<Point3D>&, double qx, double qy); |
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30 | double CalculateIQ_2D_Error(const vector<Point3D>&, double qx, double qy); |
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31 | |
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32 | //given a set of points, calculate distance correlation |
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33 | //function, and return the max dist |
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34 | double DistDistribution(const vector<Point3D>&); |
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35 | void DistDistributionXY(const vector<Point3D>&); |
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36 | |
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37 | Array2D<double> GetPr(); |
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38 | void OutputPR(const std::string &); |
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39 | void OutputPR_XY(const std::string &); |
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40 | |
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41 | virtual int GetPoints(Point3DVector &) = 0; |
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42 | void OutputPDB(const vector<Point3D>&,const char*); |
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43 | |
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44 | //will be used in calculating P(r), the maximum distance |
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45 | virtual double GetDimBound() = 0; |
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46 | //will be used to determin the maximum distance for |
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47 | //several pointsmodel instances |
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48 | virtual vector<double> GetCenter(); |
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49 | |
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50 | protected: |
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51 | double CalculateRstep(int num_points, double rmax); |
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52 | double rmax_, rstep_,cormax_,cormax_xy_; |
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53 | int r_grids_num_; |
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54 | vector<double> center_; |
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55 | |
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56 | private: |
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57 | Array2D<double> pr_,pr_xy_; |
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58 | vector<double> product_sld_; |
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59 | }; |
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60 | |
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61 | #endif |
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