source: sasview/src/sas/sasgui/perspectives/invariant/media/invariant_help.rst @ 65d1d04

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[ec392464]1.. invariant_help.rst
2
3.. This is a port of the original SasView html help file to ReSTructured text
4.. by S King, ISIS, during SasView CodeCamp-III in Feb 2015.
5
[b64b87c]6Invariant Calculation
7=====================
[ec392464]8
[a9dc4eb]9Description
10-----------
[ec392464]11
[0721c3d]12The scattering, or Porod, invariant (Q*\) is a model-independent quantity that
13can be easily calculated from scattering data.
[ec392464]14
[0721c3d]15For two phase systems, the scattering invariant is defined as the integral of
16the square of the wave transfer (Q) multiplied by the scattering cross section
17over the full range of Q from zero to infinity, that is
[ec392464]18
19.. image:: image001.gif
20
[70305bd2]21where *g = q* for pinhole geometry (SAS) and *g = q*\ :sub:`v` (the slit height) for 
[0721c3d]22slit geometry (USAS).
[ec392464]23
[0721c3d]24The worth of Q*\  is that it can be used to determine the volume fraction and
25the specific area of a sample. Whilst these quantities are useful in their own
26right they can also be used in further analysis.
[ec392464]27
[0721c3d]28The difficulty with using Q*\  arises from the fact that experimental data is
29never measured over the range 0 =< *Q* =< infinity. At best, combining USAS and
30WAS data might cover the range 1e-5 =< *Q* =< 10 1/\ |Ang| . Thus it is usually
31necessary to extrapolate the experimental data to low and high *Q*. For this
[ec392464]32
[0721c3d]33High-*Q* region (>= *Qmax* in data)
[ec392464]34
[0721c3d]35*  The power law function *C*/*Q*\ :sup:`4` is used where the constant
36   *C* (= 2.\ |pi|\ .(\ |bigdelta|\ |rho|\ ).\ *Sv*\ ) is to be found by fitting part of data
37   within the range *Q*\ :sub:`N-m` to *Q*\ :sub:`N` (where m < N).
[ec392464]38
[0721c3d]39Low-*Q* region (<= *Qmin* in data)
[ec392464]40
[0721c3d]41*  The Guinier function *I0.exp(-Rg*\ :sup:`2`\ *Q*\ :sup:`2`\ */3)* where *I0* 
42   and *Rg* are obtained by fitting as for the high-*Q* region above.
43   Alternatively a power law can be used.
[ec392464]44
[0721c3d]45.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
[ec392464]46
[b64b87c]47Using invariant analysis
48------------------------
[0721c3d]49
501) Select *Invariant* from the *Analysis* menu on the SasView toolbar.
51
522) Load some data with the *Data Explorer*.
53
543) Select a dataset and use the *Send To* button on the *Data Explorer* to load
[b64b87c]55   the dataset into the *Invariant* panel.
[0721c3d]56
[b64b87c]574) Use the *Customised Input* boxes on the *Invariant* panel to subtract
[0721c3d]58   any background, specify the contrast (i.e. difference in SLDs - this must be
59   specified for the eventual value of Q*\  to be on an absolute scale), or to
60   rescale the data.
[ec392464]61
[0721c3d]625) Adjust the extrapolation range as necessary. In most cases the default
63   values will suffice.
[ec392464]64
[0721c3d]656) Click the *Compute* button.
[ec392464]66
[0721c3d]677) To include a lower and/or higher Q range, check the relevant *Enable
68   Extrapolate* check boxes.
69   
70   If power law extrapolations are chosen, the exponent can be either held
71   fixed or fitted. The number of points, Npts, to be used for the basis of the
72   extrapolation can also be specified.
[ec392464]73
[0721c3d]748) If the value of Q*\  calculated with the extrapolated regions is invalid, a
[b64b87c]75   red warning will appear at the top of the *Invariant* panel.
[ec392464]76
[0721c3d]77   The details of the calculation are available by clicking the *Details* 
78   button in the middle of the panel.
[ec392464]79
[0721c3d]80.. image:: image005.gif
[ec392464]81
82.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
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[a9dc4eb]84Parameters
85----------
[ec392464]86
87Volume Fraction
[a9dc4eb]88^^^^^^^^^^^^^^^
[ec392464]89
[0721c3d]90The volume fraction |phi| is related to Q*\  by
91
[ec392464]92.. image:: image002.gif
93
[0721c3d]94where |bigdelta|\ |rho| is the SLD contrast.
[ec392464]95
96.. image:: image003.gif
97
98.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
99
100Specific Surface Area
[a9dc4eb]101^^^^^^^^^^^^^^^^^^^^^
[ec392464]102
[0721c3d]103The specific surface area *Sv* is related to Q*\  by
[ec392464]104
[0721c3d]105.. image:: image004.gif
[ec392464]106
[0721c3d]107where *Cp* is the Porod constant.
[ec392464]108
109.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
110
[a9dc4eb]111Reference
112---------
[ec392464]113
[0721c3d]114O. Glatter and O. Kratky
115Chapter 2 in *Small Angle X-Ray Scattering*
116Academic Press, New York, 1982
[ec392464]117
[484141c]118http://web.archive.org/web/20110824105537/http://physchem.kfunigraz.ac.at/sm/Service/Glatter_Kratky_SAXS_1982.zip
[ec392464]119
[0721c3d]120.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
[ec392464]121
[a9dc4eb]122.. note::  This help document was last changed by Steve King, 01May2015
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