source: sasview/src/sas/sasgui/perspectives/fitting/media/sm_help.rst @ 9e308a3

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalcmagnetic_scattrelease-4.2.2ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload
Last change on this file since 9e308a3 was 5ed76f8, checked in by Paul Kienzle <pkienzle@…>, 8 years ago

docs: use latex in equations rather than unicode + rst markup

  • Property mode set to 100644
File size: 7.1 KB

Smearing Functions

Sometimes the instrumental geometry used to acquire the experimental data has an impact on the clarity of features in the reduced scattering curve. For example, peaks or fringes might be slightly broadened. This is known as Q resolution smearing. To compensate for this effect one can either try and remove the resolution contribution - a process called desmearing - or add the resolution contribution into a model calculation/simulation (which by definition will be exact) to make it more representative of what has been measured experimentally - a process called smearing. SasView will do the latter.

Both smearing and desmearing rely on functions to describe the resolution effect. SasView provides three smearing algorithms:

  • Slit Smearing
  • Pinhole Smearing
  • 2D Smearing

SasView also has an option to use $Q$ resolution data (estimated at the time of data reduction) supplied in a reduced data file: the Use dQ data radio button.

dQ Smearing

If this option is checked, SasView will assume that the supplied $dQ$ values represent the standard deviations of Gaussian functions.

Slit Smearing

This type of smearing is normally only encountered with data from X-ray Kratky cameras or X-ray/neutron Bonse-Hart USAXS/USANS instruments.

The slit-smeared scattering intensity is defined by

sm_image002.png

where Norm is given by

sm_image003.png

[Equation 1]

The functions $W_v(v)$ and $W_u(u)$ refer to the slit width weighting function and the slit height weighting determined at the given $q$ point, respectively. It is assumed that the weighting function is described by a rectangular function, such that

sm_image006.png

[Equation 2]

and

sm_image007.png

[Equation 3]

so that $Delta q_alpha = int_0^infty dalpha W_alpha(alpha)$ for $alpha = v$ and $u$.

Here $Delta q_u$ and $Delta q_v$ stand for the slit height (FWHM/2) and the slit width (FWHM/2) in $q$ space.

This simplifies the integral in Equation 1 to

sm_image013.png

[Equation 4]

which may be solved numerically, depending on the nature of $Delta q_u$ and $Delta q_v$.

Solution 1

For $Delta q_v= 0$ and $Delta q_u = text{constant}$.

sm_image016.png

For discrete $q$ values, at the $q$ values of the data points and at the $q$ values extended up to $q_N = q_i + Delta q_u$ the smeared intensity can be approximately calculated as

sm_image017.png

[Equation 5]

where inlineimage018 = 0 for $I_s$ when $j < i$ or $j > N-1$.

Solution 2

For $Delta q_v = text{constant}$ and $Delta q_u= 0$.

Similar to Case 1

inlineimage019 for $q_p = q_i - Delta q_v$ and $q_N = q_i + Delta q_v$

[Equation 6]

where inlineimage018 = 0 for $I_s$ when $j < p$ or $j > N-1$.

Solution 3

For $Delta q_u = text{constant}$ and $Delta q_v = text{constant}$.

In this case, the best way is to perform the integration of Equation 1 numerically for both slit height and slit width. However, the numerical integration is imperfect unless a large number of iterations, say, at least 10000 by 10000 for each element of the matrix W, is performed. This is usually too slow for routine use.

An alternative approach is used in SasView which assumes slit width << slit height. This method combines Solution 1 with the numerical integration for the slit width. Then

sm_image020.png

[Equation 7]

for *q_p = q_i - Delta q_v$ and $q_N = q_i + Delta q_v$ where inlineimage018 = 0 for *I_s$ when $j < p$ or $j > N-1$.

??

Pinhole Smearing

This is the type of smearing normally encountered with data from synchrotron SAXS cameras and SANS instruments.

The pinhole smearing computation is performed in a similar fashion to the slit- smeared case above except that the weight function used is a Gaussian. Thus Equation 6 becomes

sm_image021.png

[Equation 8]

2D Smearing

The 2D smearing computation is performed in a similar fashion to the 1D pinhole smearing above except that the weight function used is a 2D elliptical Gaussian. Thus

sm_image022.png

[Equation 9]

In Equation 9, $x_0 = q cos(theta)$, $y_0 = q sin(theta)$, and the primed axes, are all in the coordinate rotated by an angle $theta$ about the z-axis (see the figure below) so that $x'_0 = x_0 cos(theta) + y_0 sin(theta)$ and $y'_0 = -x_0 sin(theta) + y_0 cos(theta)$. Note that the rotation angle is zero for a $xy$ symmetric elliptical Gaussian distribution. The $A$ is a normalization factor.

sm_image023.png

Now we consider a numerical integration where each of the bins in $theta$ and $R$ are evenly (this is to simplify the equation below) distributed by $Delta theta$ and $Delta R$, respectively, and it is further assumed that $I(x',y')$ is constant within the bins. Then

sm_image024.png

[Equation 10]

Since the weighting factor on each of the bins is known, it is convenient to transform $x'y'$ back to $xy$ coordinates (by rotating it by $-theta$ around the $z$ axis).

Then, for a polar symmetric smear

sm_image025.png

[Equation 11]

where

sm_image026.png

while for a $xy$ symmetric smear

sm_image027.png

[Equation 12]

where

sm_image028.png

The current version of the SasView uses Equation 11 for 2D smearing, assuming that all the Gaussian weighting functions are aligned in the polar coordinate.

Weighting & Normalization

In all the cases above, the weighting matrix $W$ is calculated on the first call to a smearing function, and includes ~60 $q$ values (finely and evenly binned) below (>0) and above the $q$ range of data in order to smear all data points for a given model and slit/pinhole size. The $Norm$ factor is found numerically with the weighting matrix and applied on the computation of $I_s$.

Note

This help document was last changed by Steve King, 01May2015

Docutils System Messages

??
Note: See TracBrowser for help on using the repository browser.