basepage.py @ 926ece5

magnetic_scattrelease-4.2.2ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249unittest-saveload

Last change on this file since 926ece5 was a4a1ac9, checked in by GitHub <noreply@…>, 6 years ago

Merge pull request #172 from SasView?/ticket-1166

Fix for report generation issue. Refs #1166.

Property mode set to 100644

File size: 146.5 KB

Line
1	"""
2	Base Page for fitting
3	"""
4	from __future__ import print_function
5
6	import sys
7	import os
8	import time
9	import copy
10	import math
11	import json
12	import logging
13	import traceback
14	from Queue import Queue
15	from threading import Thread
16	from collections import defaultdict
17
18	import numpy as np
19
20	import wx
21	from wx.lib.scrolledpanel import ScrolledPanel
22
23	from sasmodels.sasview_model import MultiplicationModel
24	from sasmodels.weights import MODELS as POLYDISPERSITY_MODELS
25	from sasmodels.weights import GaussianDispersion
26
27	from sas.sascalc.dataloader.data_info import Detector
28	from sas.sascalc.dataloader.data_info import Source
29	from sas.sascalc.fit.pagestate import PageState
30	from sas.sascalc.fit.models import PLUGIN_NAME_BASE
31
32	from sas.sasgui.guiframe.panel_base import PanelBase
33	from sas.sasgui.guiframe.report_image_handler import ReportImageHandler
34	from sas.sasgui.guiframe.utils import format_number, check_float, IdList, \
35	check_int
36	from sas.sasgui.guiframe.events import PanelOnFocusEvent
37	from sas.sasgui.guiframe.events import StatusEvent
38	from sas.sasgui.guiframe.events import AppendBookmarkEvent
39	from sas.sasgui.guiframe.dataFitting import Data2D
40	from sas.sasgui.guiframe.dataFitting import Data1D
41	from sas.sasgui.guiframe.dataFitting import check_data_validity
42	from sas.sasgui.guiframe.gui_style import GUIFRAME_ID
43	from sas.sasgui.guiframe.CategoryInstaller import CategoryInstaller
44	from sas.sasgui.guiframe.documentation_window import DocumentationWindow
45
46	from .report_dialog import ReportDialog
47	from .utils import get_weight
48
49	logger = logging.getLogger(__name__)
50
51	(PageInfoEvent, EVT_PAGE_INFO) = wx.lib.newevent.NewEvent()
52	(PreviousStateEvent, EVT_PREVIOUS_STATE) = wx.lib.newevent.NewEvent()
53	(NextStateEvent, EVT_NEXT_STATE) = wx.lib.newevent.NewEvent()
54
55	_BOX_WIDTH = 76
56	_QMIN_DEFAULT = 0.0005
57	_QMAX_DEFAULT = 0.5
58	_NPTS_DEFAULT = 50
59	# Control panel width
60	if sys.platform.count("win32") > 0:
61	PANEL_WIDTH = 450
62	FONT_VARIANT = 0
63	ON_MAC = False
64	else:
65	PANEL_WIDTH = 500
66	FONT_VARIANT = 1
67	ON_MAC = True
68
69	CUSTOM_MODEL = 'Plugin Models'
70
71	class BasicPage(ScrolledPanel, PanelBase):
72	"""
73	This class provide general structure of the fitpanel page
74	"""
75	# Internal name for the AUI manager
76	window_name = "Fit Page"
77	# Title to appear on top of the window
78	window_caption = "Fit Page "
79
80	# These two buttons have specific IDs since they seem to be created more
81	# frequently than they need to. In particular, set_dispers_sizer() is
82	# called by _on_select_model
83	ID_BOOKMARK = wx.NewId()
84	ID_DISPERSER_HELP = wx.NewId()
85	_id_pool = IdList()
86
87	def __init__(self, parent, color='blue', **kwargs):
88	"""
89	"""
90	ScrolledPanel.__init__(self, parent, **kwargs)
91	PanelBase.__init__(self, parent)
92	self.SetupScrolling()
93	# Set window's font size
94	self.SetWindowVariant(variant=FONT_VARIANT)
95	self.SetBackgroundColour(color)
96
97	self._ids = iter(self._id_pool)
98	# parent of the page
99	self.parent = parent
100	# manager is the fitting plugin
101	# owner of the page (fitting plugin)
102	self.event_owner = None
103	# current model
104	self.model = None
105	self.m_name = None
106	self.index_model = None
107	self.panel = None
108	# data
109	self.data = None
110	# list of available data
111	self.data_list = []
112	self.mask = None
113	self.uid = wx.NewId()
114	self.graph_id = None
115	# Q range for data set
116	self.qmin_data_set = np.inf
117	self.qmax_data_set = None
118	self.npts_data_set = 0
119	# Q range
120	self.qmin = None
121	self.qmax = None
122	self.qmax_x = _QMAX_DEFAULT
123	self.qmin_x = _QMIN_DEFAULT
124	self.npts_x = _NPTS_DEFAULT
125	# total number of point: float
126	self.npts = None
127	self.num_points = None
128	# smear default
129	self.current_smearer = None
130	# 2D smear accuracy default
131	self.smear2d_accuracy = 'Low'
132	# slit smear:
133	self.dxl = None
134	self.dxw = None
135	# pinhole smear
136	self.dx_percent = None
137	# smear attrbs
138	self.enable_smearer = None
139	self.disable_smearer = None
140	self.pinhole_smearer = None
141	self.slit_smearer = None
142	# weight attrbs
143	self.dI_noweight = None
144	self.dI_didata = None
145	self.dI_sqrdata = None
146	self.dI_idata = None
147	# other attrbs
148	self.dq_l = None
149	self.dq_r = None
150	self.tcChi = None
151	self.disp_box = None
152	self.model_disp = None
153	self.Npts_fit = None
154	self.Npts_total = None
155	self.theory_qmin = None
156	self.theory_qmax = None
157	self.theory_qmin_x = None
158	self.theory_qmax_x = None
159	self.btEditMask = None
160	self.btFit = None
161	self.sld_axes = None
162	self.multi_factor = None
163
164	self.disp_cb_dict = {}
165
166	# self.state = PageState()
167	# dictionary containing list of models
168	self.model_list_box = {}
169
170	# Data member to store the dispersion object created
171	self._disp_obj_dict = {}
172	# selected parameters to apply dispersion
173	self.disp_cb_dict = {}
174	# smearer object
175	self.enable2D = False
176	self._has_magnetic = False
177	self.magnetic_on = False
178	self.is_mac = ON_MAC
179	self.formfactorbox = None
180	self.structurebox = None
181	self.categorybox = None
182	# list of model parameters. each item must have same length
183	# each item related to a given parameters
184	# [cb state, name, value, "+/-", error of fit, min, max , units]
185	self.parameters = []
186	# non-fittable parameter whose value is astring
187	self.str_parameters = []
188	# list of parameters to fit , must be like self.parameters
189	self.param_toFit = []
190	# list of looking like parameters but with non fittable parameters info
191	self.fixed_param = []
192	# list of looking like parameters but with fittable parameters info
193	self.fittable_param = []
194	# list of dispersion parameters
195	self.disp_list = []
196	self.disp_name = ""
197
198	# list of orientation parameters
199	self.orientation_params = []
200	self.orientation_params_disp = []
201	# Self.model should ALWAYS be None here. It was set to none above in
202	# this long init setting. no obvious function call in between setting
203	# and this - commenting out on 4/8/2014 by PDB. Remove once clear
204	# it is pointless.
205	# if self.model is not None:
206	# self.disp_list = self.model.getDispParamList()
207	self.temp_multi_functional = False
208	# enable model 2D draw
209	self.enable2D = False
210	# check that the fit range is correct to plot the model again
211	self.fitrange = True
212	# Create memento to save the current state
213	self.state = PageState(model=self.model, data=self.data)
214	# flag to determine if state has change
215	self.state_change = False
216	# save customized array
217	self.values = {} # type: Dict[str, List[float, ...]]
218	self.weights = {} # type: Dict[str, List[float, ...]]
219	# retrieve saved state
220	self.number_saved_state = 0
221	# dictionary of saved state
222	self.saved_states = {}
223	# Create context menu for page
224	self.popUpMenu = wx.Menu()
225
226	wx_id = self._ids.next()
227	self._keep = wx.MenuItem(self.popUpMenu, wx_id, "Add bookmark",
228	" Keep the panel status to recall it later")
229	self.popUpMenu.AppendItem(self._keep)
230	self._keep.Enable(False)
231	self._set_bookmark_flag(False)
232	self._set_save_flag(False)
233	wx.EVT_MENU(self, wx_id, self.on_bookmark)
234	self.popUpMenu.AppendSeparator()
235
236	# Default locations
237	self._default_save_location = os.getcwd()
238	# save initial state on context menu
239	# self.onSave(event=None)
240	self.Bind(wx.EVT_CONTEXT_MENU, self.onContextMenu)
241
242	# bind key event
243	self.Bind(wx.EVT_LEFT_DOWN, self.on_left_down)
244
245	# create the basic structure of the panel with empty sizer
246	self.define_page_structure()
247	# drawing Initial dispersion parameters sizer
248	self.set_dispers_sizer()
249
250	# layout
251	self.set_layout()
252
253	# Setting up a thread for the fitting
254	self.threaded_draw_queue = Queue()
255
256	self.draw_worker_thread = Thread(target = self._threaded_draw_worker,
257	args = (self.threaded_draw_queue,))
258	self.draw_worker_thread.setDaemon(True)
259	self.draw_worker_thread.start()
260
261	# And a home for the thread submission times
262	self.last_time_fit_submitted = 0.00
263
264	def set_index_model(self, index):
265	"""
266	Index related to this page
267	"""
268	self.index_model = index
269
270	def create_default_data(self):
271	"""
272	Given the user selection, creates a 1D or 2D data
273	Only when the page is on theory mode.
274	"""
275	if not hasattr(self, "model_view"):
276	return
277	toggle_mode_on = self.model_view.IsEnabled() or self.data is None
278	if toggle_mode_on:
279	if self.enable2D and not check_data_validity(self.data):
280	self._create_default_2d_data()
281	else:
282	if self.pointsbox.GetValue():
283	self._create_log_1d_data()
284	else:
285	self._create_default_1d_data()
286
287	if self.model is not None:
288	if not self.data.is_data:
289	self._manager.page_finder[self.uid].set_fit_data(
290	data=[self.data])
291	self.on_smear_helper(update=True)
292	self.state.enable_smearer = self.enable_smearer.GetValue()
293	self.state.disable_smearer = self.disable_smearer.GetValue()
294	self.state.pinhole_smearer = self.pinhole_smearer.GetValue()
295	self.state.slit_smearer = self.slit_smearer.GetValue()
296
297	def _create_default_1d_data(self):
298	"""
299	Create default data for fitting perspective
300	Only when the page is on theory mode.
301	:warning: This data is never plotted.
302
303	"""
304	x = np.linspace(start=self.qmin_x, stop=self.qmax_x,
305	num=self.npts_x, endpoint=True)
306	self.data = Data1D(x=x)
307	self.data.xaxis('\\rm{Q}', "A^{-1}")
308	self.data.yaxis('\\rm{Intensity}', "cm^{-1}")
309	self.data.is_data = False
310	self.data.id = str(self.uid) + " data"
311	self.data.group_id = str(self.uid) + " Model1D"
312
313	def _create_log_1d_data(self):
314	"""
315	Create log-spaced data for fitting perspective
316	Only when the page is on theory mode.
317	:warning: This data is never plotted.
318
319	"""
320	if self.qmin_x >= 1.e-10:
321	qmin = np.log10(self.qmin_x)
322	else:
323	qmin = -10.
324
325	if self.qmax_x <= 1.e10:
326	qmax = np.log10(self.qmax_x)
327	else:
328	qmax = 10.
329
330	x = np.logspace(start=qmin, stop=qmax,
331	num=self.npts_x, endpoint=True, base=10.0)
332	self.data = Data1D(x=x)
333	self.data.xaxis('\\rm{Q}', "A^{-1}")
334	self.data.yaxis('\\rm{Intensity}', "cm^{-1}")
335	self.data.is_data = False
336	self.data.id = str(self.uid) + " data"
337	self.data.group_id = str(self.uid) + " Model1D"
338
339	def _create_default_2d_data(self):
340	"""
341	Create 2D data by default
342	Only when the page is on theory mode.
343	:warning: This data is never plotted.
344	"""
345	self.data = Data2D()
346	qmax = self.qmax_x / math.sqrt(2)
347	self.data.xaxis('\\rm{Q_{x}}', 'A^{-1}')
348	self.data.yaxis('\\rm{Q_{y}}', 'A^{-1}')
349	self.data.is_data = False
350	self.data.id = str(self.uid) + " data"
351	self.data.group_id = str(self.uid) + " Model2D"
352	# Default values
353	self.data.detector.append(Detector())
354	index = len(self.data.detector) - 1
355	self.data.detector[index].distance = 8000 # mm
356	self.data.source.wavelength = 6 # A
357	self.data.detector[index].pixel_size.x = 5 # mm
358	self.data.detector[index].pixel_size.y = 5 # mm
359	self.data.detector[index].beam_center.x = qmax
360	self.data.detector[index].beam_center.y = qmax
361	xmax = qmax
362	xmin = -qmax
363	ymax = qmax
364	ymin = -qmax
365	qstep = self.npts_x
366
367	x = np.linspace(start=xmin, stop=xmax, num=qstep, endpoint=True)
368	y = np.linspace(start=ymin, stop=ymax, num=qstep, endpoint=True)
369	# use data info instead
370	new_x = np.tile(x, (len(y), 1))
371	new_y = np.tile(y, (len(x), 1))
372	new_y = new_y.swapaxes(0, 1)
373	# all data reuire now in 1d array
374	qx_data = new_x.flatten()
375	qy_data = new_y.flatten()
376	q_data = np.sqrt(qx_data * qx_data + qy_data * qy_data)
377	# set all True (standing for unmasked) as default
378	mask = np.ones(len(qx_data), dtype=bool)
379	# store x and y bin centers in q space
380	x_bins = x
381	y_bins = y
382
383	self.data.source = Source()
384	self.data.data = np.ones(len(mask))
385	self.data.err_data = np.ones(len(mask))
386	self.data.qx_data = qx_data
387	self.data.qy_data = qy_data
388	self.data.q_data = q_data
389	self.data.mask = mask
390	self.data.x_bins = x_bins
391	self.data.y_bins = y_bins
392	# max and min taking account of the bin sizes
393	self.data.xmin = xmin
394	self.data.xmax = xmax
395	self.data.ymin = ymin
396	self.data.ymax = ymax
397
398	def on_set_focus(self, event):
399	"""
400	On Set Focus, update guimanger and menu
401	"""
402	if self._manager is not None:
403	wx.PostEvent(self._manager.parent, PanelOnFocusEvent(panel=self))
404	self.on_tap_focus()
405
406	def on_tap_focus(self):
407	"""
408	Update menu1 on cliking the page tap
409	"""
410	if self._manager.menu1 is not None:
411	chain_menu = self._manager.menu1.FindItemById(
412	self._manager.id_reset_flag)
413	chain_menu.Enable(self.batch_on)
414	sim_menu = self._manager.menu1.FindItemById(self._manager.id_simfit)
415	flag = self.data.is_data\
416	and (self.model is not None)
417	sim_menu.Enable(not self.batch_on and flag)
418	batch_menu = \
419	self._manager.menu1.FindItemById(self._manager.id_batchfit)
420	batch_menu.Enable(self.batch_on and flag)
421
422	def onContextMenu(self, event):
423	"""
424	Retrieve the state selected state
425	"""
426	pos = event.GetPosition()
427	pos = self.ScreenToClient(pos)
428	self.PopupMenu(self.popUpMenu, pos)
429
430	def onUndo(self, event):
431	"""
432	Cancel the previous action
433	"""
434	event = PreviousStateEvent(page=self)
435	wx.PostEvent(self.parent, event)
436
437	def onRedo(self, event):
438	"""
439	Restore the previous action cancelled
440	"""
441	event = NextStateEvent(page=self)
442	wx.PostEvent(self.parent, event)
443
444	def define_page_structure(self):
445	"""
446	Create empty sizer for a panel
447	"""
448	self.vbox = wx.BoxSizer(wx.VERTICAL)
449	self.sizer0 = wx.BoxSizer(wx.VERTICAL)
450	self.sizer1 = wx.BoxSizer(wx.VERTICAL)
451	self.sizer2 = wx.BoxSizer(wx.VERTICAL)
452	self.sizer3 = wx.BoxSizer(wx.VERTICAL)
453	self.sizer4 = wx.BoxSizer(wx.VERTICAL)
454	self.sizer5 = wx.BoxSizer(wx.VERTICAL)
455	self.sizer6 = wx.BoxSizer(wx.VERTICAL)
456
457	self.sizer0.SetMinSize((PANEL_WIDTH, -1))
458	self.sizer1.SetMinSize((PANEL_WIDTH, -1))
459	self.sizer2.SetMinSize((PANEL_WIDTH, -1))
460	self.sizer3.SetMinSize((PANEL_WIDTH, -1))
461	self.sizer4.SetMinSize((PANEL_WIDTH, -1))
462	self.sizer5.SetMinSize((PANEL_WIDTH, -1))
463	self.sizer6.SetMinSize((PANEL_WIDTH, -1))
464
465	self.vbox.Add(self.sizer0)
466	self.vbox.Add(self.sizer1)
467	self.vbox.Add(self.sizer2)
468	self.vbox.Add(self.sizer3)
469	self.vbox.Add(self.sizer4)
470	self.vbox.Add(self.sizer5)
471	self.vbox.Add(self.sizer6)
472
473	def set_layout(self):
474	"""
475	layout
476	"""
477	self.vbox.Layout()
478	self.vbox.Fit(self)
479	self.SetSizer(self.vbox)
480	self.Centre()
481
482	def set_owner(self, owner):
483	"""
484	set owner of fitpage
485
486	:param owner: the class responsible of plotting
487
488	"""
489	self.event_owner = owner
490	self.state.event_owner = owner
491
492	def get_state(self):
493	"""
494	return the current page state
495	"""
496	return self.state
497
498	def get_data(self):
499	"""
500	return the current data
501	"""
502	return self.data
503
504	def get_data_list(self):
505	"""
506	return the current data
507	"""
508	return self.data_list
509
510	def set_manager(self, manager):
511	"""
512	set panel manager
513
514	:param manager: instance of plugin fitting
515
516	"""
517	self._manager = manager
518	self.state.manager = manager
519
520	def populate_box(self, model_list_box):
521	"""
522	Store list of model
523
524	:param model_list_box: dictionary containing categorized models
525	"""
526	self.model_list_box = model_list_box
527	self.initialize_combox()
528
529	def set_model_dictionary(self, model_dictionary):
530	"""
531	Store a dictionary linking model name -> model object
532
533	:param model_dictionary: dictionary containing all models
534	"""
535	self.model_dictionary = model_dictionary
536
537	def initialize_combox(self):
538	"""
539	put default value in the combo box
540	"""
541	if self.model_list_box:
542	self._populate_box(self.structurebox,
543	self.model_list_box["Structure Factors"])
544	self.structurebox.Insert("None", 0, None)
545	self.structurebox.SetSelection(0)
546	self.structurebox.Hide()
547	self.text2.Hide()
548	self.structurebox.Disable()
549	self.text2.Disable()
550
551	def set_dispers_sizer(self):
552	"""
553	fill sizer containing dispersity info
554	"""
555	# print "==== entering set_dispers_sizer ==="
556	self.sizer4.Clear(True)
557	name = "Polydispersity and Orientational Distribution"
558	box_description = wx.StaticBox(self, wx.ID_ANY, name)
559	box_description.SetForegroundColour(wx.BLUE)
560	boxsizer1 = wx.StaticBoxSizer(box_description, wx.VERTICAL)
561	# ----------------------------------------------------
562	self.disable_disp = wx.RadioButton(self, wx.ID_ANY, 'Off', (10, 10),
563	style=wx.RB_GROUP)
564	self.enable_disp = wx.RadioButton(self, wx.ID_ANY, 'On', (10, 30))
565	# best size for MAC and PC
566	if ON_MAC:
567	size_q = (30, 20)
568	else:
569	size_q = (20, 15)
570	self.disp_help_bt = wx.Button(self, self.ID_DISPERSER_HELP, '?',
571	style=wx.BU_EXACTFIT,
572	size=size_q)
573	self.disp_help_bt.Bind(wx.EVT_BUTTON, self.on_pd_help_clicked,
574	id=self.disp_help_bt.GetId())
575	self.disp_help_bt.SetToolTipString("Help for polydispersion.")
576
577	self.Bind(wx.EVT_RADIOBUTTON, self._set_dipers_Param,
578	id=self.disable_disp.GetId())
579	self.Bind(wx.EVT_RADIOBUTTON, self._set_dipers_Param,
580	id=self.enable_disp.GetId())
581	# MAC needs SetValue
582	self.disable_disp.SetValue(True)
583	sizer_dispersion = wx.BoxSizer(wx.HORIZONTAL)
584	sizer_dispersion.Add((20, 20))
585	name = "" # Polydispersity and \nOrientational Distribution "
586	sizer_dispersion.Add(wx.StaticText(self, wx.ID_ANY, name))
587	sizer_dispersion.Add(self.enable_disp)
588	sizer_dispersion.Add((20, 20))
589	sizer_dispersion.Add(self.disable_disp)
590	sizer_dispersion.Add((25, 20))
591	sizer_dispersion.Add(self.disp_help_bt)
592
593	# fill a sizer for dispersion
594	boxsizer1.Add(sizer_dispersion, 0,
595	wx.TOP\|wx.BOTTOM\|wx.LEFT\|wx.EXPAND\|wx.ADJUST_MINSIZE,
596	border=5)
597	self.sizer4_4 = wx.GridBagSizer(6, 5)
598
599	boxsizer1.Add(self.sizer4_4)
600	# -----------------------------------------------------
601	self.sizer4.Add(boxsizer1, 0, wx.EXPAND \| wx.ALL, 10)
602	self.sizer4_4.Layout()
603	self.sizer4.Layout()
604	self.Layout()
605
606	self.Refresh()
607	# saving the state of enable dispersity button
608	self.state.enable_disp = self.enable_disp.GetValue()
609	self.state.disable_disp = self.disable_disp.GetValue()
610	self.SetupScrolling()
611
612	def onResetModel(self, event):
613	"""
614	Reset model state
615	"""
616	menu = event.GetEventObject()
617	# post help message for the selected model
618	msg = menu.GetHelpString(event.GetId())
619	msg += " reloaded"
620	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
621	self.Show(False)
622	name = menu.GetLabel(event.GetId())
623	self._on_select_model_helper()
624	if self.model is not None:
625	self.m_name = self.model.name
626	if name in self.saved_states.keys():
627	previous_state = self.saved_states[name]
628	# reset state of checkbox,textcrtl and regular parameters value
629
630	self.reset_page(previous_state)
631	self.state.m_name = self.m_name
632	self.Show(True)
633
634	def on_preview(self, event):
635	"""
636	Report the current fit results
637	"""
638	# Get plot image from plotpanel
639	images, canvases = self.get_images()
640	imgRAM, images, refs = self._build_plots_for_report(images, canvases)
641
642	# get the strings for report
643	report_str, text_str = self.state.report(fig_urls=refs)
644	# Show the dialog
645	report_list = [report_str, text_str, images]
646	dialog = ReportDialog(report_list, imgRAM, refs, None, wx.ID_ANY, "")
647	dialog.Show()
648
649	def _build_plots_for_report(self, figs, canvases):
650	"""
651	Build image state that wx.html understand
652	by plotting, putting it into wx.FileSystem image object
653	"""
654	bitmaps = []
655	for canvas in canvases:
656	bitmaps.append(canvas.bitmap)
657	imgs, refs = ReportImageHandler.set_figs(figs, bitmaps, 'fit')
658
659	return ReportImageHandler.instance, imgs, refs
660
661	def on_save(self, event):
662	"""
663	Save the current state into file
664	"""
665	self.save_current_state()
666	new_state = self.state.clone()
667	# Ask the user the location of the file to write to.
668	path = None
669	if self.parent is not None:
670	self._default_save_location = \
671	self._manager.parent._default_save_location
672	dlg = wx.FileDialog(self, "Choose a file", self._default_save_location,
673	self.window_caption, "*.fitv", wx.SAVE)
674
675	if dlg.ShowModal() == wx.ID_OK:
676	path = dlg.GetPath()
677	self._default_save_location = os.path.dirname(path)
678	self._manager.parent._default_save_location = \
679	self._default_save_location
680	else:
681	return None
682	# MAC always needs the extension for saving
683	extens = ".fitv"
684	# Make sure the ext included in the file name
685	fName = os.path.splitext(path)[0] + extens
686	# the manager write the state into file
687	self._manager.save_fit_state(filepath=fName, fitstate=new_state)
688	return new_state
689
690	def on_copy(self, event):
691	"""
692	Copy Parameter values to the clipboad
693	"""
694	if event is not None:
695	event.Skip()
696	# It seems MAC needs wxCallAfter
697	if event.GetId() == GUIFRAME_ID.COPYEX_ID:
698	print("copy excel")
699	wx.CallAfter(self.get_copy_excel)
700	elif event.GetId() == GUIFRAME_ID.COPYLAT_ID:
701	print("copy latex")
702	wx.CallAfter(self.get_copy_latex)
703	else:
704	wx.CallAfter(self.get_copy)
705
706	def on_paste(self, event):
707	"""
708	Paste Parameter values to the panel if possible
709	"""
710	# if event is not None:
711	# event.Skip()
712	# It seems MAC needs wxCallAfter for the setvalues
713	# for multiple textctrl items, otherwise it tends to crash once a while
714	wx.CallAfter(self.get_paste)
715	# messages depending on the flag
716	# self._copy_info(True)
717
718	def _copy_info(self, flag):
719	"""
720	Send event depending on flag
721
722	: Param flag: flag that distinguishes the event
723	"""
724	# messages depending on the flag
725	if flag is None:
726	msg = " Parameter values are copied to the clipboard..."
727	infor = 'warning'
728	elif flag:
729	msg = " Parameter values are pasted from the clipboard..."
730	infor = "warning"
731	else:
732	msg = "Error occurred: "
733	msg += "No valid parameter values to paste from the clipboard..."
734	infor = "warning"
735	# inform msg to wx
736	wx.PostEvent(self._manager.parent,
737	StatusEvent(status=msg, info=infor))
738
739	def _get_time_stamp(self):
740	"""
741	return time and date stings
742	"""
743	# date and time
744	year, month, day, hour, minute, second, _, _, _ = time.localtime()
745	current_time = str(hour) + ":" + str(minute) + ":" + str(second)
746	current_date = str(month) + "/" + str(day) + "/" + str(year)
747	return current_time, current_date
748
749	def on_bookmark(self, event):
750	"""
751	save history of the data and model
752	"""
753	if self.model is None:
754	msg = "Can not bookmark; Please select Data and Model first..."
755	wx.MessageBox(msg, 'Info')
756	return
757	self.save_current_state()
758	new_state = self.state.clone()
759	# Add model state on context menu
760	self.number_saved_state += 1
761	current_time, current_date = self._get_time_stamp()
762	# name= self.model.name+"[%g]"%self.number_saved_state
763	name = "Fitting: %g]" % self.number_saved_state
764	name += self.model.__class__.__name__
765	name += "bookmarked at %s on %s" % (current_time, current_date)
766	self.saved_states[name] = new_state
767
768	# Add item in the context menu
769	msg = "Model saved at %s on %s" % (current_time, current_date)
770	# post help message for the selected model
771	msg += " Saved! right click on this page to retrieve this model"
772	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
773
774	self.popUpMenu.Append(self.ID_BOOKMARK, name, str(msg))
775	wx.EVT_MENU(self, self.ID_BOOKMARK, self.onResetModel)
776	wx.PostEvent(self._manager.parent,
777	AppendBookmarkEvent(title=name,
778	hint=str(msg),
779	handler=self._back_to_bookmark))
780
781	def _back_to_bookmark(self, event):
782	"""
783	Back to bookmark
784	"""
785	self._manager.on_perspective(event)
786	self.onResetModel(event)
787	self._draw_model()
788
789	def onSetFocus(self, evt):
790	"""
791	highlight the current textcrtl and hide the error text control shown
792	after fitting
793	"""
794	return
795
796	def read_file(self, path):
797	"""
798	Read two columns file
799
800	:param path: the path to the file to read
801
802	"""
803	try:
804	if path is None:
805	status = " Selected Distribution was not loaded: %s" % path
806	wx.PostEvent(self._manager.parent,
807	StatusEvent(status=status))
808	return None, None
809	input_f = open(path, 'r')
810	buff = input_f.read()
811	lines = buff.split('\n')
812	input_f.close()
813	angles = []
814	weights = []
815	for line in lines:
816	toks = line.split()
817	try:
818	angle = float(toks[0])
819	weight = float(toks[1])
820	angles.append(angle)
821	weights.append(weight)
822	except Exception:
823	# Skip non-data lines
824	logger.error(traceback.format_exc())
825	return np.array(angles), np.array(weights)
826	except:
827	raise
828
829	def createMemento(self):
830	"""
831	return the current state of the page
832	"""
833	return self.state.clone()
834
835	def save_current_state(self):
836	"""
837	Store current state
838	"""
839	# save model option
840	if self.model is not None:
841	self.disp_list = self.model.getDispParamList()
842	self.state.disp_list = copy.deepcopy(self.disp_list)
843	self.state.model = self.model.clone()
844
845	# model combobox: complex code because of mac's silent error
846	if self.structurebox is not None:
847	if self.structurebox.IsShown():
848	self.state.structurecombobox = 'None'
849	s_select = self.structurebox.GetSelection()
850	if s_select > 0:
851	self.state.structurecombobox = \
852	self.structurebox.GetString(s_select)
853	if self.formfactorbox is not None:
854	f_select = self.formfactorbox.GetSelection()
855	if f_select > 0:
856	self.state.formfactorcombobox = \
857	self.formfactorbox.GetString(f_select)
858	if self.categorybox is not None:
859	cb_select = self.categorybox.GetSelection()
860	if cb_select > 0:
861	self.state.categorycombobox = \
862	self.categorybox.GetString(cb_select)
863
864	self.state.enable2D = copy.deepcopy(self.enable2D)
865	self.state.values = copy.deepcopy(self.values)
866	self.state.weights = copy.deepcopy(self.weights)
867	# save data
868	self.state.data = copy.deepcopy(self.data)
869	self.state.qmax_x = self.qmax_x
870	self.state.qmin_x = self.qmin_x
871	self.state.dI_noweight = copy.deepcopy(self.dI_noweight.GetValue())
872	self.state.dI_didata = copy.deepcopy(self.dI_didata.GetValue())
873	self.state.dI_sqrdata = copy.deepcopy(self.dI_sqrdata.GetValue())
874	self.state.dI_idata = copy.deepcopy(self.dI_idata.GetValue())
875	self.state.dq_l = self.dq_l
876	self.state.dq_r = self.dq_r
877	if hasattr(self, "enable_disp"):
878	self.state.enable_disp = self.enable_disp.GetValue()
879	self.state.disable_disp = self.disable_disp.GetValue()
880
881	if hasattr(self, "enable_smearer"):
882	self.state.enable_smearer = \
883	copy.deepcopy(self.enable_smearer.GetValue())
884	self.state.disable_smearer = \
885	copy.deepcopy(self.disable_smearer.GetValue())
886
887	self.state.pinhole_smearer = \
888	copy.deepcopy(self.pinhole_smearer.GetValue())
889	self.state.dx_percent = copy.deepcopy(self.dx_percent)
890	self.state.dxl = copy.deepcopy(self.dxl)
891	self.state.dxw = copy.deepcopy(self.dxw)
892	self.state.slit_smearer = copy.deepcopy(self.slit_smearer.GetValue())
893
894	if len(self._disp_obj_dict) > 0:
895	for k, v in self._disp_obj_dict.iteritems():
896	self.state.disp_obj_dict[k] = v.type
897
898	self.state.values = copy.deepcopy(self.values)
899	self.state.weights = copy.deepcopy(self.weights)
900	# save plotting range
901	self._save_plotting_range()
902
903	self.state.orientation_params = []
904	self.state.orientation_params_disp = []
905	self.state.parameters = []
906	self.state.fittable_param = []
907	self.state.fixed_param = []
908	self.state.str_parameters = []
909
910	# save checkbutton state and txtcrtl values
911	self._copy_parameters_state(self.str_parameters,
912	self.state.str_parameters)
913	self._copy_parameters_state(self.orientation_params,
914	self.state.orientation_params)
915	self._copy_parameters_state(self.orientation_params_disp,
916	self.state.orientation_params_disp)
917
918	self._copy_parameters_state(self.parameters, self.state.parameters)
919	self._copy_parameters_state(self.fittable_param,
920	self.state.fittable_param)
921	self._copy_parameters_state(self.fixed_param, self.state.fixed_param)
922	# save chisqr
923	self.state.tcChi = self.tcChi.GetValue()
924
925	def save_current_state_fit(self):
926	"""
927	Store current state for fit_page
928	"""
929	# save model option
930	if self.model is not None:
931	self.disp_list = self.model.getDispParamList()
932	self.state.disp_list = copy.deepcopy(self.disp_list)
933	self.state.model = self.model.clone()
934
935	self.state.enable2D = copy.deepcopy(self.enable2D)
936	self.state.values = copy.deepcopy(self.values)
937	self.state.weights = copy.deepcopy(self.weights)
938	# save data
939	self.state.data = copy.deepcopy(self.data)
940
941	if hasattr(self, "enable_disp"):
942	self.state.enable_disp = self.enable_disp.GetValue()
943	self.state.disable_disp = self.disable_disp.GetValue()
944
945	if hasattr(self, "enable_smearer"):
946	self.state.enable_smearer = \
947	copy.deepcopy(self.enable_smearer.GetValue())
948	self.state.disable_smearer = \
949	copy.deepcopy(self.disable_smearer.GetValue())
950
951	self.state.pinhole_smearer = \
952	copy.deepcopy(self.pinhole_smearer.GetValue())
953	self.state.slit_smearer = copy.deepcopy(self.slit_smearer.GetValue())
954	self.state.dI_noweight = copy.deepcopy(self.dI_noweight.GetValue())
955	self.state.dI_didata = copy.deepcopy(self.dI_didata.GetValue())
956	self.state.dI_sqrdata = copy.deepcopy(self.dI_sqrdata.GetValue())
957	self.state.dI_idata = copy.deepcopy(self.dI_idata.GetValue())
958	if hasattr(self, "disp_box") and self.disp_box is not None:
959	self.state.disp_box = self.disp_box.GetCurrentSelection()
960
961	if len(self.disp_cb_dict) > 0:
962	for k, v in self.disp_cb_dict.iteritems():
963	if v is None:
964	self.state.disp_cb_dict[k] = v
965	else:
966	try:
967	self.state.disp_cb_dict[k] = v.GetValue()
968	except Exception:
969	self.state.disp_cb_dict[k] = None
970	if len(self._disp_obj_dict) > 0:
971	for k, v in self._disp_obj_dict.iteritems():
972	self.state.disp_obj_dict[k] = v.type
973
974	self.state.values = copy.deepcopy(self.values)
975	self.state.weights = copy.deepcopy(self.weights)
976
977	# save plotting range
978	self._save_plotting_range()
979
980	# save checkbutton state and txtcrtl values
981	self._copy_parameters_state(self.orientation_params,
982	self.state.orientation_params)
983	self._copy_parameters_state(self.orientation_params_disp,
984	self.state.orientation_params_disp)
985	self._copy_parameters_state(self.parameters, self.state.parameters)
986	self._copy_parameters_state(self.fittable_param,
987	self.state.fittable_param)
988	self._copy_parameters_state(self.fixed_param, self.state.fixed_param)
989
990	def check_invalid_panel(self):
991	"""
992	check if the user can already perform some action with this panel
993	"""
994	if self.data is None:
995	self.disable_smearer.SetValue(True)
996	self.disable_disp.SetValue(True)
997	msg = "Please load Data and select Model to start..."
998	wx.MessageBox(msg, 'Info')
999	return True
1000
1001	def set_model_state(self, state):
1002	"""
1003	reset page given a model state
1004	"""
1005	self.disp_cb_dict = state.disp_cb_dict
1006	self.disp_list = state.disp_list
1007
1008	# fill model combobox
1009	self._show_combox_helper()
1010	# select the current model
1011	try:
1012	# to support older version
1013	category_pos = int(state.categorycombobox)
1014	except Exception:
1015	category_pos = 0
1016	for ind_cat in range(self.categorybox.GetCount()):
1017	if self.categorycombobox.GetString(ind_cat) == \
1018	state.categorycombobox:
1019	category_pos = int(ind_cat)
1020	break
1021
1022	self.categorybox.Select(category_pos)
1023	try:
1024	# to support older version
1025	formfactor_pos = int(state.formfactorcombobox)
1026	except Exception:
1027	formfactor_pos = 0
1028	for ind_form in range(self.formfactorbox.GetCount()):
1029	if self.formfactorbox.GetString(ind_form) == \
1030	state.formfactorcombobox:
1031	formfactor_pos = int(ind_form)
1032	break
1033
1034	self.formfactorbox.Select(formfactor_pos)
1035
1036	try:
1037	# to support older version
1038	structfactor_pos = int(state.structurecombobox)
1039	except Exception:
1040	structfactor_pos = 0
1041	for ind_struct in range(self.structurebox.GetCount()):
1042	if self.structurebox.GetString(ind_struct) == \
1043	state.structurecombobox:
1044	structfactor_pos = int(ind_struct)
1045	break
1046
1047	self.structurebox.SetSelection(structfactor_pos)
1048
1049	if state.multi_factor is not None:
1050	self.multifactorbox.SetSelection(state.multi_factor)
1051
1052	# reset state of checkbox,textcrtl and regular parameters value
1053	self._reset_parameters_state(self.orientation_params_disp,
1054	state.orientation_params_disp)
1055	self._reset_parameters_state(self.orientation_params,
1056	state.orientation_params)
1057	self._reset_parameters_state(self.str_parameters,
1058	state.str_parameters)
1059	self._reset_parameters_state(self.parameters, state.parameters)
1060	# display dispersion info layer
1061	self.enable_disp.SetValue(state.enable_disp)
1062	self.disable_disp.SetValue(state.disable_disp)
1063
1064	if hasattr(self, "disp_box") and self.disp_box is not None:
1065	self.disp_box.SetSelection(state.disp_box)
1066	n = self.disp_box.GetCurrentSelection()
1067	dispersity = self.disp_box.GetClientData(n)
1068	name = dispersity.__name__
1069	self._set_dipers_Param(event=None)
1070
1071	if name == "ArrayDispersion":
1072
1073	for item in self.disp_cb_dict.keys():
1074
1075	if hasattr(self.disp_cb_dict[item], "SetValue"):
1076	self.disp_cb_dict[item].SetValue(
1077	state.disp_cb_dict[item])
1078	# Create the dispersion objects
1079	disp_model = POLYDISPERSITY_MODELS['array']()
1080	if hasattr(state, "values") and \
1081	self.disp_cb_dict[item].GetValue():
1082	if len(state.values) > 0:
1083	self.values = state.values
1084	self.weights = state.weights
1085	disp_model.set_weights(self.values,
1086	state.weights)
1087	else:
1088	self._reset_dispersity()
1089
1090	self._disp_obj_dict[item] = disp_model
1091	# Set the new model as the dispersion object
1092	# for the selected parameter
1093	self.model.set_dispersion(item, disp_model)
1094
1095	self.model._persistency_dict[item] = \
1096	[state.values, state.weights]
1097
1098	else:
1099	keys = self.model.getParamList()
1100	for item in keys:
1101	if item in self.disp_list and \
1102	item not in self.model.details:
1103	self.model.details[item] = ["", None, None]
1104	self.disp_cb_dict = copy.deepcopy(state.disp_cb_dict)
1105	self.state.disp_cb_dict = copy.deepcopy(state.disp_cb_dict)
1106	# smearing info restore
1107	if hasattr(self, "enable_smearer"):
1108	# set smearing value whether or not the data
1109	# contain the smearing info
1110	self.enable_smearer.SetValue(state.enable_smearer)
1111	self.disable_smearer.SetValue(state.disable_smearer)
1112	self.onSmear(event=None)
1113	self.pinhole_smearer.SetValue(state.pinhole_smearer)
1114	self.slit_smearer.SetValue(state.slit_smearer)
1115
1116	self.dI_noweight.SetValue(state.dI_noweight)
1117	self.dI_didata.SetValue(state.dI_didata)
1118	self.dI_sqrdata.SetValue(state.dI_sqrdata)
1119	self.dI_idata.SetValue(state.dI_idata)
1120
1121	# we have two more options for smearing
1122	if self.pinhole_smearer.GetValue():
1123	self.onPinholeSmear(event=None)
1124	elif self.slit_smearer.GetValue():
1125	self.onSlitSmear(event=None)
1126
1127	# reset state of checkbox,textcrtl and dispersity parameters value
1128	self._reset_parameters_state(self.fittable_param, state.fittable_param)
1129	self._reset_parameters_state(self.fixed_param, state.fixed_param)
1130
1131	# draw the model with previous parameters value
1132	self._onparamEnter_helper()
1133	self.select_param(event=None)
1134	# Save state_fit
1135	self.save_current_state_fit()
1136	self._lay_out()
1137	self.Refresh()
1138
1139	def get_cat_combo_box_pos(self, state):
1140	"""
1141	Iterate through the categories to find the structurefactor
1142	:return: combo_box_position
1143	"""
1144	for key, value in self.master_category_dict.iteritems():
1145	formfactor = state.formfactorcombobox.split(":")
1146	if isinstance(formfactor, list):
1147	formfactor = formfactor[0]
1148	for list_item in value:
1149	if formfactor in list_item:
1150	return self.categorybox.Items.index(key)
1151	return 0
1152
1153	def reset_page_helper(self, state):
1154	"""
1155	Use page_state and change the state of existing page
1156
1157	:precondition: the page is already drawn or created
1158
1159	:postcondition: the state of the underlying data changes as well as the
1160	state of the graphic interface
1161	"""
1162	if state is None:
1163	return
1164	# set data, etc. from the state
1165	# reset page between theory and fitting from bookmarking
1166	data = state.data
1167
1168	if data is None:
1169	data_min = state.qmin
1170	data_max = state.qmax
1171	self.qmin_x = data_min
1172	self.qmax_x = data_max
1173	self.qmin.SetValue(str(data_min))
1174	self.qmax.SetValue(str(data_max))
1175
1176	self.state.data = data
1177	self.state.qmin = self.qmin_x
1178	self.state.qmax = self.qmax_x
1179	else:
1180	self.set_data(data)
1181
1182	self.enable2D = state.enable2D
1183	try:
1184	self.magnetic_on = state.magnetic_on
1185	except:
1186	# Backward compatibility (for older state files)
1187	self.magnetic_on = False
1188
1189	self.disp_cb_dict = state.disp_cb_dict
1190	self.disp_list = state.disp_list
1191
1192	# fill model combobox
1193	self._show_combox_helper()
1194	# select the current model
1195	state._convert_to_sasmodels()
1196	state.categorycombobox = unicode(state.categorycombobox)
1197	if state.categorycombobox in self.categorybox.Items:
1198	category_pos = self.categorybox.Items.index(
1199	state.categorycombobox)
1200	else:
1201	# Look in master list for model name (model.lower)
1202	category_pos = self.get_cat_combo_box_pos(state)
1203
1204	self.categorybox.Select(category_pos)
1205	self._show_combox(None)
1206	if (self.categorybox.GetValue() == CUSTOM_MODEL
1207	and PLUGIN_NAME_BASE not in state.formfactorcombobox):
1208	state.formfactorcombobox = \
1209	PLUGIN_NAME_BASE + state.formfactorcombobox
1210	formfactor_pos = 0
1211	for ind_form in range(self.formfactorbox.GetCount()):
1212	if (self.formfactorbox.GetString(ind_form)
1213	== state.formfactorcombobox):
1214	formfactor_pos = int(ind_form)
1215	break
1216
1217	self.formfactorbox.Select(formfactor_pos)
1218
1219	structfactor_pos = 0
1220	if state.structurecombobox is not None:
1221	state.structurecombobox = unicode(state.structurecombobox)
1222	for ind_struct in range(self.structurebox.GetCount()):
1223	if (self.structurebox.GetString(ind_struct)
1224	== state.structurecombobox):
1225	structfactor_pos = int(ind_struct)
1226	break
1227
1228	self.structurebox.SetSelection(structfactor_pos)
1229
1230	if state.multi_factor is not None:
1231	self.multifactorbox.SetSelection(state.multi_factor)
1232
1233	# draw the panel according to the new model parameter
1234	self._on_select_model(event=None)
1235
1236	# take care of 2D button
1237	if data is None and self.model_view.IsEnabled():
1238	if self.enable2D:
1239	self.model_view.SetLabel("2D Mode")
1240	else:
1241	self.model_view.SetLabel("1D Mode")
1242
1243	# reset state of checkbox,textcrtl and regular parameters value
1244	self._reset_parameters_state(self.orientation_params_disp,
1245	state.orientation_params_disp)
1246	self._reset_parameters_state(self.orientation_params,
1247	state.orientation_params)
1248	self._reset_parameters_state(self.str_parameters,
1249	state.str_parameters)
1250	self._reset_parameters_state(self.parameters, state.parameters)
1251	# display dispersion info layer
1252	self.enable_disp.SetValue(state.enable_disp)
1253	self.disable_disp.SetValue(state.disable_disp)
1254	# If the polydispersion is ON
1255	if state.enable_disp:
1256	# reset dispersion according the state
1257	self._set_dipers_Param(event=None)
1258	self._reset_page_disp_helper(state)
1259	# plotting range restore
1260	self._reset_plotting_range(state)
1261	# smearing info restore
1262	if hasattr(self, "enable_smearer"):
1263	# set smearing value whether or not the data
1264	# contain the smearing info
1265	self.enable_smearer.SetValue(state.enable_smearer)
1266	self.disable_smearer.SetValue(state.disable_smearer)
1267	self.onSmear(event=None)
1268	self.pinhole_smearer.SetValue(state.pinhole_smearer)
1269	self.slit_smearer.SetValue(state.slit_smearer)
1270	try:
1271	self.dI_noweight.SetValue(state.dI_noweight)
1272	self.dI_didata.SetValue(state.dI_didata)
1273	self.dI_sqrdata.SetValue(state.dI_sqrdata)
1274	self.dI_idata.SetValue(state.dI_idata)
1275	except Exception:
1276	# to support older state file formats
1277	self.dI_noweight.SetValue(False)
1278	self.dI_didata.SetValue(True)
1279	self.dI_sqrdata.SetValue(False)
1280	self.dI_idata.SetValue(False)
1281
1282	# we have two more options for smearing
1283	if self.pinhole_smearer.GetValue():
1284	self.dx_percent = state.dx_percent
1285	if self.dx_percent is not None:
1286	if state.dx_old:
1287	self.dx_percent = 100 * (self.dx_percent / self.data.x[0])
1288	self.smear_pinhole_percent.SetValue("%.2f" % self.dx_percent)
1289	self.onPinholeSmear(event=None)
1290	elif self.slit_smearer.GetValue():
1291	self.dxl = state.dxl
1292	self.dxw = state.dxw
1293	if self.dxl is not None:
1294	self.smear_slit_height.SetValue(str(self.dxl))
1295	if self.dxw is not None:
1296	self.smear_slit_width.SetValue(str(self.dxw))
1297	else:
1298	self.smear_slit_width.SetValue('')
1299	self.onSlitSmear(event=None)
1300
1301	# reset state of checkbox,textcrtl and dispersity parameters value
1302	self._reset_parameters_state(self.fittable_param, state.fittable_param)
1303	self._reset_parameters_state(self.fixed_param, state.fixed_param)
1304
1305	# draw the model with previous parameters value
1306	self._onparamEnter_helper()
1307	# reset the value of chisqr when not consistent with the value computed
1308	self.tcChi.SetValue(str(self.state.tcChi))
1309	# reset context menu items
1310	self._reset_context_menu()
1311
1312	# set the value of the current state to the state given as parameter
1313	self.state = state.clone()
1314	self.state.m_name = self.m_name
1315
1316	def _reset_page_disp_helper(self, state):
1317	"""
1318	Help to rest page for dispersions
1319	"""
1320	keys = self.model.getParamList()
1321	for item in keys:
1322	if item in self.disp_list and \
1323	item not in self.model.details:
1324	self.model.details[item] = ["", None, None]
1325	# for k,v in self.state.disp_cb_dict.iteritems():
1326	self.disp_cb_dict = copy.deepcopy(state.disp_cb_dict)
1327	self.state.disp_cb_dict = copy.deepcopy(state.disp_cb_dict)
1328	self.values = copy.deepcopy(state.values)
1329	self.weights = copy.deepcopy(state.weights)
1330
1331	for key, disp_type in state.disp_obj_dict.iteritems():
1332	# disp_model = disp
1333	disp_model = POLYDISPERSITY_MODELS[disp_type]()
1334	self._disp_obj_dict[key] = disp_model
1335	param_name = key.split('.')[0]
1336	# Try to set dispersion only when available
1337	# for eg., pass the orient. angles for 1D Cal
1338	try:
1339	self.model.set_dispersion(param_name, disp_model)
1340	self.model._persistency_dict[key] = \
1341	[state.values, state.weights]
1342	except Exception:
1343	logger.error(traceback.format_exc())
1344	index, selection = self._find_polyfunc_selection(disp_model)
1345	for list in self.fittable_param:
1346	if list[1] == key and list[7] is not None:
1347	list[7].SetSelection(index)
1348	# For the array disp_model, set the values and weights
1349	if selection == 'array':
1350	disp_model.set_weights(self.values[key],
1351	self.weights[key])
1352	try:
1353	# Diables all fittable params for array
1354	list[0].SetValue(False)
1355	list[0].Disable()
1356	list[2].Disable()
1357	list[5].Disable()
1358	list[6].Disable()
1359	except Exception:
1360	logger.error(traceback.format_exc())
1361	# For array, disable all fixed params
1362	if selection == 'array':
1363	for item in self.fixed_param:
1364	if item[1].split(".")[0] == key.split(".")[0]:
1365	# try it and pass it for the orientation for 1D
1366	try:
1367	item[2].Disable()
1368	except Exception:
1369	logger.error(traceback.format_exc())
1370
1371	def _selectDlg(self):
1372	"""
1373	open a dialog file to select the customized polydispersity function
1374	"""
1375	if self.parent is not None:
1376	self._default_save_location = \
1377	self._manager.parent.get_save_location()
1378	dlg = wx.FileDialog(self, "Choose a weight file",
1379	self._default_save_location, "",
1380	".", wx.OPEN)
1381	path = None
1382	if dlg.ShowModal() == wx.ID_OK:
1383	path = dlg.GetPath()
1384	dlg.Destroy()
1385	return path
1386
1387	def _reset_context_menu(self):
1388	"""
1389	reset the context menu
1390	"""
1391	ids = iter(self._id_pool) # Reusing ids for context menu
1392	for name, _ in self.state.saved_states.iteritems():
1393	self.number_saved_state += 1
1394	# Add item in the context menu
1395	wx_id = ids.next()
1396	msg = 'Save model and state %g' % self.number_saved_state
1397	self.popUpMenu.Append(wx_id, name, msg)
1398	wx.EVT_MENU(self, wx_id, self.onResetModel)
1399
1400	def _reset_plotting_range(self, state):
1401	"""
1402	Reset the plotting range to a given state
1403	"""
1404	self.qmin.SetValue(str(state.qmin))
1405	self.qmax.SetValue(str(state.qmax))
1406
1407	def _save_typeOfmodel(self):
1408	"""
1409	save radiobutton containing the type model that can be selected
1410	"""
1411	# self.state.shape_rbutton = self.shape_rbutton.GetValue()
1412	# self.state.shape_indep_rbutton = self.shape_indep_rbutton.GetValue()
1413	# self.state.struct_rbutton = self.struct_rbutton.GetValue()
1414	# self.state.plugin_rbutton = self.plugin_rbutton.GetValue()
1415	self.state.structurecombobox = self.structurebox.GetValue()
1416	self.state.formfactorcombobox = self.formfactorbox.GetValue()
1417	self.state.categorycombobox = self.categorybox.GetValue()
1418
1419	# post state to fit panel
1420	event = PageInfoEvent(page=self)
1421	wx.PostEvent(self.parent, event)
1422
1423	def _save_plotting_range(self):
1424	"""
1425	save the state of plotting range
1426	"""
1427	self.state.qmin = self.qmin_x
1428	self.state.qmax = self.qmax_x
1429	self.state.npts = self.npts_x
1430
1431	def _onparamEnter_helper(self, is_modified=False):
1432	"""
1433	check if values entered by the user are changed and valid to replot
1434	model
1435	"""
1436	# Flag to register when a parameter has changed.
1437	# is_modified = False
1438	self.fitrange = True
1439	is_2Ddata = False
1440	# self._undo.Enable(True)
1441	# check if 2d data
1442	if self.data.__class__.__name__ == "Data2D":
1443	is_2Ddata = True
1444	if self.model is not None:
1445	# Either we get a is_modified = True passed in because
1446	# _update_paramv_on_fit() has been called already or
1447	# we need to check here ourselves.
1448	if not is_modified:
1449	is_modified = self._check_value_enter(self.fittable_param)
1450	is_modified = self._check_value_enter(
1451	self.fixed_param) or is_modified
1452	is_modified = self._check_value_enter(
1453	self.parameters) or is_modified
1454
1455	# Here we should check whether the boundaries have been modified.
1456	# If qmin and qmax have been modified, update qmin and qmax and
1457	# set the is_modified flag to True
1458	if self._validate_qrange(self.qmin, self.qmax):
1459	tempmin = float(self.qmin.GetValue())
1460	if tempmin != self.qmin_x:
1461	self.qmin_x = tempmin
1462	is_modified = True
1463	tempmax = float(self.qmax.GetValue())
1464	if tempmax != self.qmax_x:
1465	self.qmax_x = tempmax
1466	is_modified = True
1467	if is_2Ddata:
1468	is_modified = self._validate_Npts()
1469	else:
1470	is_modified = self._validate_Npts_1D()
1471	else:
1472	self.fitrange = False
1473
1474	# if any value is modify draw model with new value
1475	if not self.fitrange:
1476	# self.btFit.Disable()
1477	if is_2Ddata:
1478	self.btEditMask.Disable()
1479	else:
1480	if is_2Ddata and self.data.is_data and not self.batch_on:
1481	self.btEditMask.Enable(True)
1482	if is_modified and self.fitrange:
1483	# Theory case: need to get npts value to draw
1484	self.npts_x = float(self.Npts_total.GetValue())
1485	self.Npts_fit.SetValue(str(self.Npts_total.GetValue()))
1486	self._save_plotting_range()
1487	self.create_default_data()
1488	self.state_change = True
1489	self._draw_model()
1490	self.Refresh()
1491
1492	# logger.info("is_modified flag set to %g",is_modified)
1493	return is_modified
1494
1495	def _update_paramv_on_fit(self):
1496	"""
1497	make sure that update param values just before the fitting
1498	"""
1499	# flag for qmin qmax check values
1500	flag = True
1501	self.fitrange = True
1502	is_modified = False
1503
1504	# wx.PostEvent(self._manager.parent, StatusEvent(status=" \
1505	# updating ... ",type="update"))
1506
1507	# So make sure that update param values on_Fit.
1508	# self._undo.Enable(True)
1509	if self.model is not None:
1510	if self.Npts_total.GetValue() != self.Npts_fit.GetValue():
1511	if not self.data.is_data:
1512	self._manager.page_finder[self.uid].set_fit_data(
1513	data=[self.data])
1514	# Check the values
1515	is_modified = self._check_value_enter(self.fittable_param)
1516	is_modified = self._check_value_enter(self.fixed_param) or is_modified
1517	is_modified = self._check_value_enter(self.parameters) or is_modified
1518
1519	# If qmin and qmax have been modified, update qmin and qmax and
1520	# Here we should check whether the boundaries have been modified.
1521	# If qmin and qmax have been modified, update qmin and qmax and
1522	# set the is_modified flag to True
1523	self.fitrange = self._validate_qrange(self.qmin, self.qmax)
1524	if self.fitrange:
1525	tempmin = float(self.qmin.GetValue())
1526	if tempmin != self.qmin_x:
1527	self.qmin_x = tempmin
1528	tempmax = float(self.qmax.GetValue())
1529	if tempmax != self.qmax_x:
1530	self.qmax_x = tempmax
1531	if tempmax == tempmin:
1532	flag = False
1533	temp_smearer = None
1534	if not self.disable_smearer.GetValue():
1535	temp_smearer = self.current_smearer
1536	if self.slit_smearer.GetValue():
1537	flag = self.update_slit_smear()
1538	elif self.pinhole_smearer.GetValue():
1539	flag = self.update_pinhole_smear()
1540	else:
1541	enable_smearer = not self.disable_smearer.GetValue()
1542	self._manager.set_smearer(smearer=temp_smearer,
1543	uid=self.uid,
1544	fid=self.data.id,
1545	qmin=float(self.qmin_x),
1546	qmax=float(self.qmax_x),
1547	enable_smearer=enable_smearer,
1548	draw=False)
1549	elif not self._is_2D():
1550	enable_smearer = not self.disable_smearer.GetValue()
1551	self._manager.set_smearer(smearer=temp_smearer,
1552	qmin=float(self.qmin_x),
1553	uid=self.uid,
1554	fid=self.data.id,
1555	qmax=float(self.qmax_x),
1556	enable_smearer=enable_smearer,
1557	draw=False)
1558	if self.data is not None:
1559	index_data = ((self.qmin_x <= self.data.x) &
1560	(self.data.x <= self.qmax_x))
1561	val = str(len(self.data.x[index_data]))
1562	self.Npts_fit.SetValue(val)
1563	else:
1564	# No data in the panel
1565	try:
1566	self.npts_x = float(self.Npts_total.GetValue())
1567	except Exception:
1568	flag = False
1569	return flag
1570	flag = True
1571	if self._is_2D():
1572	# only 2D case set mask
1573	flag = self._validate_Npts()
1574	if not flag:
1575	return flag
1576	else:
1577	flag = False
1578	else:
1579	flag = False
1580
1581	# For invalid q range, disable the mask editor and fit button, vs.
1582	if not self.fitrange:
1583	if self._is_2D():
1584	self.btEditMask.Disable()
1585	else:
1586	if self._is_2D() and self.data.is_data and not self.batch_on:
1587	self.btEditMask.Enable(True)
1588
1589	if not flag:
1590	msg = "Cannot Plot or Fit :Must select a "
1591	msg += " model or Fitting range is not valid!!! "
1592	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
1593
1594	try:
1595	self.save_current_state()
1596	except Exception:
1597	logger.error(traceback.format_exc())
1598
1599	return flag, is_modified
1600
1601	def _reset_parameters_state(self, listtorestore, statelist):
1602	"""
1603	Reset the parameters at the given state
1604	"""
1605	if len(statelist) == 0 or len(listtorestore) == 0:
1606	return
1607
1608	for item_page in listtorestore:
1609	for param in statelist:
1610	if param[1] == item_page[1]:
1611	item_page_info = param
1612	if (item_page_info[1] == "theta" or item_page_info[1] ==
1613	"phi") and not self._is_2D():
1614	break
1615	# change the state of the check box for simple parameters
1616	if item_page[0] is not None:
1617	item_page[0].SetValue(item_page_info[0])
1618	if item_page[2] is not None:
1619	item_page[2].SetValue(item_page_info[2])
1620	if item_page[2].__class__.__name__ == "ComboBox":
1621	if item_page_info[2] in self.model.fun_list:
1622	fun_val = self.model.fun_list.index(item_page_info[2])
1623	self.model.setParam(item_page_info[1], fun_val)
1624	if item_page[3] is not None:
1625	# show or hide text +/-
1626	if item_page_info[2]:
1627	item_page[3].Show(True)
1628	else:
1629	item_page[3].Hide()
1630	if item_page[4] is not None:
1631	# show of hide the text crtl for fitting error
1632	if item_page_info[4][0]:
1633	item_page[4].Show(True)
1634	item_page[4].SetValue(str(item_page_info[4][1]))
1635	else:
1636	item_page[3].Hide()
1637	if item_page[5] is not None:
1638	# show of hide the text crtl for fitting error
1639	item_page[5].Show(True)
1640	item_page[5].SetValue(str(item_page_info[5][1]))
1641	if item_page[6] is not None:
1642	# show of hide the text crtl for fitting error
1643	item_page[6].Show(True)
1644	item_page[6].SetValue(str(item_page_info[6][1]))
1645	break
1646
1647	def _reset_strparam_state(self, listtorestore, statelist):
1648	"""
1649	Reset the string parameters at the given state
1650	"""
1651	if len(statelist) == 0:
1652	return
1653
1654	listtorestore = copy.deepcopy(statelist)
1655
1656	for item_page, item_page_info in zip(listtorestore, statelist):
1657	# change the state of the check box for simple parameters
1658	if item_page[0] is not None:
1659	item_page[0].SetValue(format_number(item_page_info[0], True))
1660
1661	if item_page[2] is not None:
1662	param_name = item_page_info[1]
1663	value = item_page_info[2]
1664	selection = value
1665	if value in self.model.fun_list:
1666	selection = self.model.fun_list.index(value)
1667	item_page[2].SetValue(selection)
1668	self.model.setParam(param_name, selection)
1669
1670	def _copy_parameters_state(self, listtocopy, statelist):
1671	"""
1672	copy the state of button
1673
1674	:param listtocopy: the list of check button to copy
1675	:param statelist: list of state object to store the current state
1676
1677	"""
1678	if len(listtocopy) == 0:
1679	return
1680
1681	for item in listtocopy:
1682
1683	checkbox_state = None
1684	if item[0] is not None:
1685	checkbox_state = item[0].GetValue()
1686	parameter_name = item[1]
1687	parameter_value = None
1688	if item[2] is not None:
1689	parameter_value = item[2].GetValue()
1690	static_text = None
1691	if item[3] is not None:
1692	static_text = item[3].IsShown()
1693	error_value = None
1694	error_state = None
1695	if item[4] is not None:
1696	error_value = item[4].GetValue()
1697	error_state = item[4].IsShown()
1698
1699	min_value = None
1700	min_state = None
1701	if item[5] is not None:
1702	min_value = item[5].GetValue()
1703	min_state = item[5].IsShown()
1704
1705	max_value = None
1706	max_state = None
1707	if item[6] is not None:
1708	max_value = item[6].GetValue()
1709	max_state = item[6].IsShown()
1710	unit = None
1711	if item[7] is not None:
1712	unit = item[7].GetLabel()
1713
1714	statelist.append([checkbox_state, parameter_name, parameter_value,
1715	static_text, [error_state, error_value],
1716	[min_state, min_value],
1717	[max_state, max_value], unit])
1718
1719	def _draw_model(self, update_chisqr=True, source='model'):
1720	"""
1721	Method to draw or refresh a plotted model.
1722	The method will use the data member from the model page
1723	to build a call to the fitting perspective manager.
1724
1725	:param chisqr: update chisqr value [bool]
1726	"""
1727	self.threaded_draw_queue.put([copy.copy(update_chisqr), copy.copy(source)])
1728
1729	def _threaded_draw_worker(self, threaded_draw_queue):
1730	while True:
1731	# sit and wait for the next task
1732	next_task = threaded_draw_queue.get()
1733
1734	# sleep for 1/10th second in case some other tasks accumulate
1735	time.sleep(0.1)
1736
1737	# skip all intermediate tasks
1738	while self.threaded_draw_queue.qsize() > 0:
1739	self.threaded_draw_queue.task_done()
1740	next_task = self.threaded_draw_queue.get()
1741
1742	# and finally, do the task
1743	self._draw_model_after(*next_task)
1744	threaded_draw_queue.task_done()
1745
1746	def _draw_model_after(self, update_chisqr=True, source='model'):
1747	"""
1748	Method to draw or refresh a plotted model.
1749	The method will use the data member from the model page
1750	to build a call to the fitting perspective manager.
1751
1752	:param chisqr: update chisqr value [bool]
1753	"""
1754	# if self.check_invalid_panel():
1755	# return
1756	if self.model is not None:
1757	temp_smear = None
1758	if hasattr(self, "enable_smearer"):
1759	if not self.disable_smearer.GetValue():
1760	temp_smear = self.current_smearer
1761	# compute weight for the current data
1762	flag = self.get_weight_flag()
1763	weight = get_weight(data=self.data, is2d=self._is_2D(), flag=flag)
1764	toggle_mode_on = self.model_view.IsEnabled()
1765	is_2d = self._is_2D()
1766
1767	self._manager.draw_model(self.model,
1768	data=self.data,
1769	smearer=temp_smear,
1770	qmin=float(self.qmin_x),
1771	qmax=float(self.qmax_x),
1772	page_id=self.uid,
1773	toggle_mode_on=toggle_mode_on,
1774	state=self.state,
1775	enable2D=is_2d,
1776	update_chisqr=update_chisqr,
1777	source='model',
1778	weight=weight)
1779
1780	def _on_show_sld(self, event=None):
1781	"""
1782	Plot SLD profile
1783	"""
1784	# get profile data
1785	x, y = self.model.getProfile()
1786
1787	from sas.sasgui.plottools import Data1D as pf_data1d
1788	from sas.sasgui.guiframe.local_perspectives.plotting.profile_dialog \
1789	import SLDPanel
1790	sld_data = pf_data1d(x, y)
1791	sld_data.name = 'SLD'
1792	sld_data.axes = self.sld_axes
1793	self.panel = SLDPanel(self, data=sld_data, axes=self.sld_axes,
1794	id=wx.ID_ANY)
1795	self.panel.ShowModal()
1796
1797	def _set_multfactor_combobox(self, multiplicity=10):
1798	"""
1799	Set comboBox for multitfactor of CoreMultiShellModel
1800	:param multiplicit: no. of multi-functionality
1801	"""
1802	# build content of the combobox
1803	for idx in range(0, multiplicity):
1804	self.multifactorbox.Append(str(idx), int(idx))
1805	self._hide_multfactor_combobox()
1806
1807	def _show_multfactor_combobox(self):
1808	"""
1809	Show the comboBox of muitfactor of CoreMultiShellModel
1810	"""
1811	if not self.mutifactor_text.IsShown():
1812	self.mutifactor_text.Show(True)
1813	self.mutifactor_text1.Show(True)
1814	if not self.multifactorbox.IsShown():
1815	self.multifactorbox.Show(True)
1816
1817	def _hide_multfactor_combobox(self):
1818	"""
1819	Hide the comboBox of muitfactor of CoreMultiShellModel
1820	"""
1821	if self.mutifactor_text.IsShown():
1822	self.mutifactor_text.Hide()
1823	self.mutifactor_text1.Hide()
1824	if self.multifactorbox.IsShown():
1825	self.multifactorbox.Hide()
1826
1827	def formfactor_combo_init(self):
1828	"""
1829	First time calls _show_combox_helper
1830	"""
1831	self._show_combox(None)
1832
1833	def _show_combox_helper(self):
1834	"""
1835	Fill panel's combo box according to the type of model selected
1836	"""
1837
1838	mod_cat = self.categorybox.GetStringSelection()
1839	self.structurebox.SetSelection(0)
1840	self.structurebox.Disable()
1841	self.formfactorbox.Clear()
1842	if mod_cat is None:
1843	return
1844	m_list = []
1845	try:
1846	if mod_cat == CUSTOM_MODEL:
1847	for model in self.model_list_box[mod_cat]:
1848	m_list.append(self.model_dictionary[model.name])
1849	else:
1850	cat_dic = self.master_category_dict[mod_cat]
1851	for model, enabled in cat_dic:
1852	if enabled:
1853	m_list.append(self.model_dictionary[model])
1854	except Exception:
1855	msg = traceback.format_exc()
1856	wx.PostEvent(self._manager.parent,
1857	StatusEvent(status=msg, info="error"))
1858	self._populate_box(self.formfactorbox, m_list)
1859
1860	def _on_modify_cat(self, event=None):
1861	"""
1862	Called when category manager is opened
1863	"""
1864	self._manager.parent.on_category_panel(event)
1865
1866	def _show_combox(self, event=None):
1867	"""
1868	Show combox box associate with type of model selected
1869	"""
1870	self.Show(False)
1871	self._show_combox_helper()
1872	self._on_select_model(event=None)
1873	self.Show(True)
1874	self._save_typeOfmodel()
1875	self.sizer4_4.Layout()
1876	self.sizer4.Layout()
1877	self.Layout()
1878	self.Refresh()
1879
1880	def _populate_box(self, combobox, list):
1881	"""
1882	fill combox box with dict item
1883
1884	:param list: contains item to fill the combox
1885	item must model class
1886	"""
1887	mlist = []
1888	for models in list:
1889	if models.name != "NoStructure":
1890	mlist.append((models.name, models))
1891	# Sort the models
1892	mlist_sorted = sorted(mlist)
1893	for item in mlist_sorted:
1894	combobox.Append(item[0], item[1])
1895	return 0
1896
1897	def _onQrangeEnter(self, event):
1898	"""
1899	Check validity of value enter in the Q range field
1900
1901	"""
1902	tcrtl = event.GetEventObject()
1903	# Clear msg if previously shown.
1904	msg = ""
1905	wx.PostEvent(self.parent, StatusEvent(status=msg))
1906	# Flag to register when a parameter has changed.
1907	if tcrtl.GetValue().lstrip().rstrip() != "":
1908	try:
1909	float(tcrtl.GetValue())
1910	tcrtl.SetBackgroundColour(wx.WHITE)
1911	# If qmin and qmax have been modified, update qmin and qmax
1912	if self._validate_qrange(self.qmin, self.qmax):
1913	tempmin = float(self.qmin.GetValue())
1914	if tempmin != self.qmin_x:
1915	self.qmin_x = tempmin
1916	tempmax = float(self.qmax.GetValue())
1917	if tempmax != self.qmax_x:
1918	self.qmax_x = tempmax
1919	else:
1920	tcrtl.SetBackgroundColour("pink")
1921	msg = "Model Error: wrong value entered: %s" % \
1922	sys.exc_info()[1]
1923	wx.PostEvent(self.parent, StatusEvent(status=msg))
1924	return
1925	except Exception:
1926	tcrtl.SetBackgroundColour("pink")
1927	msg = "Model Error: wrong value entered: %s" % sys.exc_info()[1]
1928	wx.PostEvent(self.parent, StatusEvent(status=msg))
1929	return
1930	# Check if # of points for theory model are valid(>0).
1931	if self.npts is not None:
1932	if check_float(self.npts):
1933	temp_npts = float(self.npts.GetValue())
1934	if temp_npts != self.num_points:
1935	self.num_points = temp_npts
1936	else:
1937	msg = "Cannot plot: No points in Q range!!! "
1938	wx.PostEvent(self.parent, StatusEvent(status=msg))
1939	else:
1940	tcrtl.SetBackgroundColour("pink")
1941	msg = "Model Error: wrong value entered!!!"
1942	wx.PostEvent(self.parent, StatusEvent(status=msg))
1943	self.save_current_state()
1944	event = PageInfoEvent(page=self)
1945	wx.PostEvent(self.parent, event)
1946	self.state_change = False
1947	# Draw the model for a different range
1948	if not self.data.is_data:
1949	self.create_default_data()
1950	self._draw_model()
1951
1952	def _theory_qrange_enter(self, event):
1953	"""
1954	Check validity of value enter in the Q range field
1955	"""
1956
1957	tcrtl = event.GetEventObject()
1958	# Clear msg if previously shown.
1959	msg = ""
1960	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
1961	# Flag to register when a parameter has changed.
1962	is_modified = False
1963	if tcrtl.GetValue().lstrip().rstrip() != "":
1964	try:
1965	value = float(tcrtl.GetValue())
1966	tcrtl.SetBackgroundColour(wx.WHITE)
1967
1968	# If qmin and qmax have been modified, update qmin and qmax
1969	if self._validate_qrange(self.theory_qmin, self.theory_qmax):
1970	tempmin = float(self.theory_qmin.GetValue())
1971	if tempmin != self.theory_qmin_x:
1972	self.theory_qmin_x = tempmin
1973	tempmax = float(self.theory_qmax.GetValue())
1974	if tempmax != self.qmax_x:
1975	self.theory_qmax_x = tempmax
1976	else:
1977	tcrtl.SetBackgroundColour("pink")
1978	msg = "Model Error: wrong value entered: %s" % \
1979	sys.exc_info()[1]
1980	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
1981	return
1982	except Exception:
1983	tcrtl.SetBackgroundColour("pink")
1984	msg = "Model Error: wrong value entered: %s" % sys.exc_info()[1]
1985	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
1986	return
1987	# Check if # of points for theory model are valid(>0).
1988	if self.Npts_total.IsEditable():
1989	if check_float(self.Npts_total):
1990	temp_npts = float(self.Npts_total.GetValue())
1991	if temp_npts != self.num_points:
1992	self.num_points = temp_npts
1993	is_modified = True
1994	else:
1995	msg = "Cannot Plot: No points in Q range!!! "
1996	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
1997	else:
1998	tcrtl.SetBackgroundColour("pink")
1999	msg = "Model Error: wrong value entered!!!"
2000	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
2001	self.save_current_state()
2002	event = PageInfoEvent(page=self)
2003	wx.PostEvent(self.parent, event)
2004	self.state_change = False
2005	# Draw the model for a different range
2006	self.create_default_data()
2007	self._draw_model()
2008
2009	def _on_select_model_helper(self):
2010	"""
2011	call back for model selection
2012	"""
2013	# reset dictionary containing reference to dispersion
2014	self._disp_obj_dict = {}
2015	self.disp_cb_dict = {}
2016	self.temp_multi_functional = False
2017	f_id = self.formfactorbox.GetCurrentSelection()
2018	# For MAC
2019	form_factor = None
2020	if f_id >= 0:
2021	form_factor = self.formfactorbox.GetClientData(f_id)
2022
2023	if form_factor is None or \
2024	not hasattr(form_factor, 'is_form_factor') or \
2025	not form_factor.is_form_factor:
2026	self.structurebox.Hide()
2027	self.text2.Hide()
2028	self.structurebox.Disable()
2029	self.structurebox.SetSelection(0)
2030	self.text2.Disable()
2031	else:
2032	self.structurebox.Show()
2033	self.text2.Show()
2034	self.structurebox.Enable()
2035	self.text2.Enable()
2036
2037	if form_factor is not None:
2038	# set multifactor for Mutifunctional models
2039	if form_factor.is_multiplicity_model:
2040	m_id = self.multifactorbox.GetCurrentSelection()
2041	multiplicity = form_factor.multiplicity_info[0]
2042	self.multifactorbox.Clear()
2043	self._set_multfactor_combobox(multiplicity)
2044	self._show_multfactor_combobox()
2045	# ToDo: this info should be called directly from the model
2046	text = form_factor.multiplicity_info[1] # 'No. of Shells: '
2047
2048	self.mutifactor_text.SetLabel(text)
2049	if m_id > multiplicity - 1:
2050	# default value
2051	m_id = 1
2052
2053	self.multi_factor = self.multifactorbox.GetClientData(m_id)
2054	if self.multi_factor is None:
2055	self.multi_factor = 0
2056	self.multifactorbox.SetSelection(m_id)
2057	# Check len of the text1 and max_multiplicity
2058	text = ''
2059	if form_factor.multiplicity_info[0] == \
2060	len(form_factor.multiplicity_info[2]):
2061	text = form_factor.multiplicity_info[2][self.multi_factor]
2062	self.mutifactor_text1.SetLabel(text)
2063	# Check if model has get sld profile.
2064	if len(form_factor.multiplicity_info[3]) > 0:
2065	self.sld_axes = form_factor.multiplicity_info[3]
2066	self.show_sld_button.Show(True)
2067	else:
2068	self.sld_axes = ""
2069	else:
2070	self._hide_multfactor_combobox()
2071	self.show_sld_button.Hide()
2072	self.multi_factor = None
2073	else:
2074	self._hide_multfactor_combobox()
2075	self.show_sld_button.Hide()
2076	self.multi_factor = None
2077
2078	s_id = self.structurebox.GetCurrentSelection()
2079	struct_factor = self.structurebox.GetClientData(s_id)
2080
2081	if struct_factor is not None:
2082	self.model = MultiplicationModel(form_factor(self.multi_factor),
2083	struct_factor())
2084	# multifunctional form factor
2085	if len(form_factor.non_fittable) > 0:
2086	self.temp_multi_functional = True
2087	elif form_factor is not None:
2088	if self.multi_factor is not None:
2089	self.model = form_factor(self.multi_factor)
2090	else:
2091	# old style plugin models do not accept a multiplicity argument
2092	self.model = form_factor()
2093	else:
2094	self.model = None
2095	return
2096
2097	# check if model has magnetic parameters
2098	if len(self.model.magnetic_params) > 0:
2099	self._has_magnetic = True
2100	else:
2101	self._has_magnetic = False
2102	# post state to fit panel
2103	self.state.parameters = []
2104	self.state.model = self.model
2105	self.state.qmin = self.qmin_x
2106	self.state.multi_factor = self.multi_factor
2107	self.disp_list = self.model.getDispParamList()
2108	self.state.disp_list = self.disp_list
2109	self.on_set_focus(None)
2110	self.Layout()
2111
2112	def _validate_qrange(self, qmin_ctrl, qmax_ctrl):
2113	"""
2114	Verify that the Q range controls have valid values
2115	and that Qmin < Qmax.
2116
2117	:param qmin_ctrl: text control for Qmin
2118	:param qmax_ctrl: text control for Qmax
2119
2120	:return: True is the Q range is value, False otherwise
2121
2122	"""
2123	qmin_validity = check_float(qmin_ctrl)
2124	qmax_validity = check_float(qmax_ctrl)
2125	if not (qmin_validity and qmax_validity):
2126	return False
2127	else:
2128	qmin = float(qmin_ctrl.GetValue())
2129	qmax = float(qmax_ctrl.GetValue())
2130	if qmin < qmax:
2131	# Make sure to set both colours white.
2132	qmin_ctrl.SetBackgroundColour(wx.WHITE)
2133	qmin_ctrl.Refresh()
2134	qmax_ctrl.SetBackgroundColour(wx.WHITE)
2135	qmax_ctrl.Refresh()
2136	else:
2137	qmin_ctrl.SetBackgroundColour("pink")
2138	qmin_ctrl.Refresh()
2139	qmax_ctrl.SetBackgroundColour("pink")
2140	qmax_ctrl.Refresh()
2141	msg = "Invalid Q range: Q min must be smaller than Q max"
2142	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
2143	return False
2144	return True
2145
2146	def _validate_Npts(self):
2147	"""
2148	Validate the number of points for fitting is more than 10 points.
2149	If valid, setvalues Npts_fit otherwise post msg.
2150	"""
2151	# default flag
2152	flag = True
2153	# Theory
2154	if self.data is None and self.enable2D:
2155	return flag
2156	for data in self.data_list:
2157	# q value from qx and qy
2158	radius = np.sqrt(data.qx_data * data.qx_data +
2159	data.qy_data * data.qy_data)
2160	# get unmasked index
2161	index_data = (float(self.qmin.GetValue()) <= radius) & \
2162	(radius <= float(self.qmax.GetValue()))
2163	index_data = (index_data) & (data.mask)
2164	index_data = (index_data) & (np.isfinite(data.data))
2165
2166	if len(index_data[index_data]) < 10:
2167	# change the color pink.
2168	self.qmin.SetBackgroundColour("pink")
2169	self.qmin.Refresh()
2170	self.qmax.SetBackgroundColour("pink")
2171	self.qmax.Refresh()
2172	msg = "Data Error: "
2173	msg += "Too few points in %s." % data.name
2174	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
2175	self.fitrange = False
2176	flag = False
2177	else:
2178	self.Npts_fit.SetValue(str(len(index_data[index_data])))
2179	self.fitrange = True
2180
2181	return flag
2182
2183	def _validate_Npts_1D(self):
2184	"""
2185	Validate the number of points for fitting is more than 5 points.
2186	If valid, setvalues Npts_fit otherwise post msg.
2187	"""
2188	# default flag
2189	flag = True
2190	# Theory
2191	if self.data is None:
2192	return flag
2193	for data in self.data_list:
2194	# q value from qx and qy
2195	radius = data.x
2196	# get unmasked index
2197	index_data = (float(self.qmin.GetValue()) <= radius) & \
2198	(radius <= float(self.qmax.GetValue()))
2199	index_data = (index_data) & (np.isfinite(data.y))
2200
2201	if len(index_data[index_data]) < 5:
2202	# change the color pink.
2203	self.qmin.SetBackgroundColour("pink")
2204	self.qmin.Refresh()
2205	self.qmax.SetBackgroundColour("pink")
2206	self.qmax.Refresh()
2207	msg = "Data Error: "
2208	msg += "Too few points in %s." % data.name
2209	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
2210	self.fitrange = False
2211	flag = False
2212	else:
2213	self.Npts_fit.SetValue(str(len(index_data[index_data])))
2214	self.fitrange = True
2215
2216	return flag
2217
2218	def _check_value_enter(self, list):
2219	"""
2220	:param list: model parameter and panel info
2221	:Note: each item of the list should be as follow:
2222	item=[check button state, parameter's name,
2223	paramater's value, string="+/-",
2224	parameter's error of fit,
2225	parameter's minimum value,
2226	parameter's maximum value ,
2227	parameter's units]
2228
2229	Returns True if the model parameters have changed.
2230	"""
2231	is_modified = False
2232	for item in list:
2233	# skip angle parameters for 1D
2234	if not self.enable2D and item in self.orientation_params:
2235	continue
2236
2237	value_ctrl = item[2]
2238	if not value_ctrl.IsEnabled():
2239	# ArrayDispersion disables PD, Min, Max, Npts, Nsigs
2240	continue
2241
2242	name = item[1]
2243	value_str = value_ctrl.GetValue().strip()
2244	if name.endswith(".npts"):
2245	validity = check_int(value_ctrl)
2246	if not validity:
2247	continue
2248	value = int(value_str)
2249
2250	elif name.endswith(".nsigmas"):
2251	validity = check_float(value_ctrl)
2252	if not validity:
2253	continue
2254	value = float(value_str)
2255
2256	else: # value or polydispersity
2257
2258	# Check that min, max and value are floats
2259	min_ctrl, max_ctrl = item[5], item[6]
2260	min_str = min_ctrl.GetValue().strip()
2261	max_str = max_ctrl.GetValue().strip()
2262	validity = check_float(value_ctrl)
2263	if min_str != "":
2264	validity = validity and check_float(min_ctrl)
2265	if max_str != "":
2266	validity = validity and check_float(max_ctrl)
2267	if not validity:
2268	continue
2269
2270	# Check that min is less than max
2271	low = -np.inf if min_str == "" else float(min_str)
2272	high = np.inf if max_str == "" else float(max_str)
2273	if high < low:
2274	min_ctrl.SetBackgroundColour("pink")
2275	min_ctrl.Refresh()
2276	max_ctrl.SetBackgroundColour("pink")
2277	max_ctrl.Refresh()
2278	# msg = "Invalid fit range for %s: min must be smaller
2279	# than max"%name
2280	# wx.PostEvent(self._manager.parent,
2281	# StatusEvent(status=msg))
2282	continue
2283
2284	# Force value between min and max
2285	value = float(value_str)
2286	if value < low:
2287	value = low
2288	value_ctrl.SetValue(format_number(value))
2289	elif value > high:
2290	value = high
2291	value_ctrl.SetValue(format_number(value))
2292
2293	if name not in self.model.details.keys():
2294	self.model.details[name] = ["", None, None]
2295	old_low, old_high = self.model.details[name][1:3]
2296	if old_low != low or old_high != high:
2297	# The configuration has changed but it won't change the
2298	# computed curve so no need to set is_modified to True
2299	# is_modified = True
2300	self.model.details[name][1:3] = low, high
2301
2302	# Update value in model if it has changed
2303	if (value != self.model.getParam(name) or
2304	(np.isnan(value) and np.isnan(self.model.getParam(name)))):
2305	self.model.setParam(name, value)
2306	is_modified = True
2307
2308	return is_modified
2309
2310	def _set_dipers_Param(self, event):
2311	"""
2312	respond to self.enable_disp and self.disable_disp radio box.
2313	The dispersity object is reset inside the model into Gaussian.
2314	When the user select yes , this method display a combo box for
2315	more selection when the user selects No,the combo box disappears.
2316	Redraw the model with the default dispersity (Gaussian)
2317	"""
2318	# On selction if no model exists.
2319	if self.model is None:
2320	self.disable_disp.SetValue(True)
2321	msg = "Please select a Model first..."
2322	wx.MessageBox(msg, 'Info')
2323	wx.PostEvent(self._manager.parent,
2324	StatusEvent(status="Polydispersion: %s" % msg))
2325	return
2326
2327	self._reset_dispersity()
2328
2329	if self.model is None:
2330	self.model_disp.Hide()
2331	self.sizer4_4.Clear(True)
2332	return
2333
2334	if self.enable_disp.GetValue():
2335	# layout for model containing no dispersity parameters
2336
2337	self.disp_list = self.model.getDispParamList()
2338
2339	if len(self.disp_list) == 0 and len(self.disp_cb_dict) == 0:
2340	self._layout_sizer_noDipers()
2341	else:
2342	# set gaussian sizer
2343	self._on_select_Disp(event=None)
2344	else:
2345	self.sizer4_4.Clear(True)
2346
2347	# post state to fit panel
2348	self.save_current_state()
2349	if event is not None:
2350	event = PageInfoEvent(page=self)
2351	wx.PostEvent(self.parent, event)
2352	# draw the model with the current dispersity
2353
2354	# Wojtek P, Oct 8, 2016: Calling draw_model seems to be unessecary.
2355	# By comenting it we save an extra Iq calculation
2356	# self._draw_model()
2357
2358	# Need to use FitInside again here to replace the next four lines.
2359	# Otherwised polydispersity off does not resize the scrollwindow.
2360	# PDB Nov 28, 2015
2361	self.FitInside()
2362	# self.sizer4_4.Layout()
2363	# self.sizer5.Layout()
2364	# self.Layout()
2365	# self.Refresh()
2366
2367	def _layout_sizer_noDipers(self):
2368	"""
2369	Draw a sizer with no dispersity info
2370	"""
2371	ix = 0
2372	iy = 1
2373	self.fittable_param = []
2374	self.fixed_param = []
2375	self.orientation_params_disp = []
2376
2377	self.sizer4_4.Clear(True)
2378	text = "No polydispersity available for this model"
2379	model_disp = wx.StaticText(self, wx.ID_ANY, text)
2380	self.sizer4_4.Add(model_disp, (iy, ix), (1, 1),
2381	wx.LEFT \| wx.EXPAND \| wx.ADJUST_MINSIZE, 10)
2382	self.sizer4_4.Layout()
2383	self.sizer4.Layout()
2384
2385	def _reset_dispersity(self):
2386	"""
2387	put gaussian dispersity into current model
2388	"""
2389	if self.param_toFit:
2390	for item in self.fittable_param:
2391	if item in self.param_toFit:
2392	self.param_toFit.remove(item)
2393
2394	for item in self.orientation_params_disp:
2395	if item in self.param_toFit:
2396	self.param_toFit.remove(item)
2397
2398	self.fittable_param = []
2399	self.fixed_param = []
2400	self.orientation_params_disp = []
2401	self.values = {}
2402	self.weights = {}
2403
2404	if not self.disp_cb_dict:
2405	self.sizer4_4.Clear(True)
2406	else:
2407	for p in self.disp_cb_dict:
2408	# The parameter was un-selected.
2409	# Go back to Gaussian model (with 0 pts)
2410	disp_model = GaussianDispersion()
2411
2412	self._disp_obj_dict[p] = disp_model
2413	# Set the new model as the dispersion object
2414	# for the selected parameter
2415	try:
2416	self.model.set_dispersion(p, disp_model)
2417	except Exception:
2418	logger.error(traceback.format_exc())
2419
2420	# save state into
2421	self.save_current_state()
2422	self.Layout()
2423	self.Refresh()
2424
2425	def _on_select_Disp(self, event):
2426	"""
2427	allow selecting different dispersion
2428	self.disp_list should change type later .now only gaussian
2429	"""
2430	self._set_sizer_dispersion()
2431
2432	# Redraw the model
2433	# Wojtek P. Nov 7, 2016: Redrawing seems to be unnecessary here
2434	# self._draw_model()
2435	# self._undo.Enable(True)
2436	event = PageInfoEvent(page=self)
2437	wx.PostEvent(self.parent, event)
2438
2439	self.sizer4_4.Layout()
2440	self.sizer4.Layout()
2441	self.SetupScrolling()
2442
2443	def _on_disp_func(self, event=None):
2444	"""
2445	Select a distribution function for the polydispersion
2446
2447	:Param event: ComboBox event
2448	"""
2449	# get ready for new event
2450	if event is not None:
2451	event.Skip()
2452	# Get event object
2453	disp_box = event.GetEventObject()
2454
2455	# Try to select a Distr. function
2456	try:
2457	disp_box.SetBackgroundColour("white")
2458	selection = disp_box.GetCurrentSelection()
2459	param_name = disp_box.Name.split('.')[0]
2460	disp_name = disp_box.GetValue()
2461	dispersity = disp_box.GetClientData(selection)
2462
2463	# disp_model = GaussianDispersion()
2464	disp_model = dispersity()
2465	# Get param names to reset the values of the param
2466	name1 = param_name + ".width"
2467	name2 = param_name + ".npts"
2468	name3 = param_name + ".nsigmas"
2469	# Check Disp. function whether or not it is 'array'
2470	if disp_name.lower() == "array":
2471	value2 = ""
2472	value3 = ""
2473	value1 = self._set_array_disp(name=name1, disp=disp_model)
2474	else:
2475	self._del_array_values(name1)
2476	# self._reset_array_disp(param_name)
2477	self._disp_obj_dict[name1] = disp_model
2478	self.model.set_dispersion(param_name, disp_model)
2479	self.state.disp_obj_dict[name1] = disp_model.type
2480
2481	value1 = str(format_number(self.model.getParam(name1), True))
2482	value2 = str(format_number(self.model.getParam(name2)))
2483	value3 = str(format_number(self.model.getParam(name3)))
2484	# Reset fittable polydispersin parameter value
2485	for item in self.fittable_param:
2486	if item[1] == name1:
2487	item[2].SetValue(value1)
2488	item[5].SetValue("")
2489	item[6].SetValue("")
2490	# Disable for array
2491	if disp_name.lower() == "array":
2492	item[0].SetValue(False)
2493	item[0].Disable()
2494	item[2].Disable()
2495	item[3].Show(False)
2496	item[4].Show(False)
2497	item[5].Disable()
2498	item[6].Disable()
2499	else:
2500	item[0].Enable()
2501	item[2].Enable()
2502	item[3].Show(True)
2503	item[4].Show(True)
2504	item[5].Enable()
2505	item[6].Enable()
2506	break
2507	# Reset fixed polydispersion params
2508	for item in self.fixed_param:
2509	if item[1] == name2:
2510	item[2].SetValue(value2)
2511	# Disable Npts for array
2512	if disp_name.lower() == "array":
2513	item[2].Disable()
2514	else:
2515	item[2].Enable()
2516	if item[1] == name3:
2517	item[2].SetValue(value3)
2518	# Disable Nsigs for array
2519	if disp_name.lower() == "array":
2520	item[2].Disable()
2521	else:
2522	item[2].Enable()
2523
2524	# Make sure the check box updated
2525	self.get_all_checked_params()
2526
2527	# update params
2528	self._update_paramv_on_fit()
2529	# draw
2530	self._draw_model()
2531	self.Layout()
2532	self.Refresh()
2533	except Exception:
2534	logger.error(traceback.format_exc())
2535	# Error msg
2536	msg = "Error occurred:"
2537	msg += " Could not select the distribution function..."
2538	msg += " Please select another distribution function."
2539	disp_box.SetBackgroundColour("pink")
2540	# Focus on Fit button so that users can see the pinky box
2541	self.btFit.SetFocus()
2542	wx.PostEvent(self._manager.parent,
2543	StatusEvent(status=msg, info="error"))
2544
2545	def _set_array_disp(self, name=None, disp=None):
2546	"""
2547	Set array dispersion
2548
2549	:param name: name of the parameter for the dispersion to be set
2550	:param disp: the polydisperion object
2551	"""
2552	# The user wants this parameter to be averaged.
2553	# Pop up the file selection dialog.
2554	path = self._selectDlg()
2555	# Array data
2556	values = []
2557	weights = []
2558	# If nothing was selected, just return
2559	if path is None:
2560	self.disp_cb_dict[name].SetValue(False)
2561	# self.noDisper_rbox.SetValue(True)
2562	return
2563	self._default_save_location = os.path.dirname(path)
2564	if self._manager is not None:
2565	self._manager.parent._default_save_location = \
2566	self._default_save_location
2567
2568	basename = os.path.basename(path)
2569	values, weights = self.read_file(path)
2570
2571	# If any of the two arrays is empty, notify the user that we won't
2572	# proceed
2573	if len(self.param_toFit) > 0:
2574	if name in self.param_toFit:
2575	self.param_toFit.remove(name)
2576
2577	# Tell the user that we are about to apply the distribution
2578	msg = "Applying loaded %s distribution: %s" % (name, path)
2579	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
2580	self._set_array_disp_model(name=name, disp=disp,
2581	values=values, weights=weights)
2582	return basename
2583
2584	def _set_array_disp_model(self, name=None, disp=None,
2585	values=[], weights=[]):
2586	"""
2587	Set array dispersion model
2588
2589	:param name: name of the parameter for the dispersion to be set
2590	:param disp: the polydisperion object
2591	"""
2592	disp.set_weights(values, weights)
2593	self._disp_obj_dict[name] = disp
2594	self.model.set_dispersion(name.split('.')[0], disp)
2595	self.state.disp_obj_dict[name] = disp.type
2596	self.values[name] = values
2597	self.weights[name] = weights
2598	# Store the object to make it persist outside the
2599	# scope of this method
2600	# TODO: refactor model to clean this up?
2601	self.state.values = {}
2602	self.state.weights = {}
2603	self.state.values = copy.deepcopy(self.values)
2604	self.state.weights = copy.deepcopy(self.weights)
2605
2606	# Set the new model as the dispersion object for the
2607	# selected parameter
2608	# self.model.set_dispersion(p, disp_model)
2609	# Store a reference to the weights in the model object
2610	# so that
2611	# it's not lost when we use the model within another thread.
2612	self.state.model = self.model.clone()
2613	self.model._persistency_dict[name.split('.')[0]] = \
2614	[values, weights]
2615	self.state.model._persistency_dict[name.split('.')[0]] = \
2616	[values, weights]
2617
2618	def _del_array_values(self, name=None):
2619	"""
2620	Reset array dispersion
2621
2622	:param name: name of the parameter for the dispersion to be set
2623	"""
2624	# Try to delete values and weight of the names array dic if exists
2625	try:
2626	if name in self.values:
2627	del self.values[name]
2628	del self.weights[name]
2629	# delete all other dic
2630	del self.state.values[name]
2631	del self.state.weights[name]
2632	del self.model._persistency_dict[name.split('.')[0]]
2633	del self.state.model._persistency_dict[name.split('.')[0]]
2634	except Exception:
2635	logger.error(traceback.format_exc())
2636
2637	def _lay_out(self):
2638	"""
2639	returns self.Layout
2640
2641	:Note: Mac seems to like this better when self.
2642	Layout is called after fitting.
2643	"""
2644	self.Layout()
2645	return
2646
2647	def _find_polyfunc_selection(self, disp_func=None):
2648	"""
2649	Find Combobox selection from disp_func
2650
2651	:param disp_function: dispersion distr. function
2652	"""
2653	# Find the selection
2654	if disp_func is not None:
2655	try:
2656	return (list(POLYDISPERSITY_MODELS).index(disp_func.type),
2657	disp_func.type)
2658	except ValueError:
2659	pass # Fall through to default class
2660	return (list(POLYDISPERSITY_MODELS).index('gaussian'), 'gaussian')
2661
2662	def on_reset_clicked(self, event):
2663	"""
2664	On 'Reset' button for Q range clicked
2665	"""
2666	flag = True
2667	# For 3 different cases: Data2D, Data1D, and theory
2668	if self.model is None:
2669	msg = "Please select a model first..."
2670	wx.MessageBox(msg, 'Info')
2671	flag = False
2672	return
2673
2674	elif self.data.__class__.__name__ == "Data2D":
2675	data_min = 0
2676	x = max(math.fabs(self.data.xmin), math.fabs(self.data.xmax))
2677	y = max(math.fabs(self.data.ymin), math.fabs(self.data.ymax))
2678	self.qmin_x = data_min
2679	self.qmax_x = math.sqrt(x * x + y * y)
2680	# self.data.mask = np.ones(len(self.data.data),dtype=bool)
2681	# check smearing
2682	if not self.disable_smearer.GetValue():
2683	# set smearing value whether or
2684	# not the data contain the smearing info
2685	if self.pinhole_smearer.GetValue():
2686	flag = self.update_pinhole_smear()
2687	else:
2688	flag = True
2689
2690	elif self.data is None:
2691	self.qmin_x = _QMIN_DEFAULT
2692	self.qmax_x = _QMAX_DEFAULT
2693	self.num_points = _NPTS_DEFAULT
2694	self.state.npts = self.num_points
2695
2696	elif self.data.__class__.__name__ != "Data2D":
2697	self.qmin_x = min(self.data.x)
2698	self.qmax_x = max(self.data.x)
2699	# check smearing
2700	if not self.disable_smearer.GetValue():
2701	# set smearing value whether or
2702	# not the data contain the smearing info
2703	if self.slit_smearer.GetValue():
2704	flag = self.update_slit_smear()
2705	elif self.pinhole_smearer.GetValue():
2706	flag = self.update_pinhole_smear()
2707	else:
2708	flag = True
2709	else:
2710	flag = False
2711
2712	if flag is False:
2713	msg = "Cannot Plot :Must enter a number!!! "
2714	wx.PostEvent(self._manager.parent, StatusEvent(status=msg))
2715	else:
2716	# set relative text ctrs.
2717	self.qmin.SetValue(str(self.qmin_x))
2718	self.qmax.SetValue(str(self.qmax_x))
2719	self.show_npts2fit()
2720	# At this point, some button and variables satatus (disabled?)
2721	# should be checked such as color that should be reset to
2722	# white in case that it was pink.
2723	self._onparamEnter_helper()
2724
2725	self.save_current_state()
2726	self.state.qmin = self.qmin_x
2727	self.state.qmax = self.qmax_x
2728
2729	# reset the q range values
2730	self._reset_plotting_range(self.state)
2731	self._draw_model()
2732
2733	def select_log(self, event):
2734	"""
2735	Log checked to generate log spaced points for theory model
2736	"""
2737
2738	def get_images(self):
2739	"""
2740	Get the images of the plots corresponding this panel for report
2741
2742	: return graphs: list of figures
2743	: Need Move to guiframe
2744	"""
2745	# set list of graphs
2746	graphs = []
2747	canvases = []
2748	res_item = None
2749	# call gui_manager
2750	gui_manager = self._manager.parent
2751	# loops through the panels [dic]
2752	for _, item2 in gui_manager.plot_panels.iteritems():
2753	data_title = self.data.group_id
2754	# try to get all plots belonging to this control panel
2755	try:
2756	g_id = item2.group_id
2757	if g_id == data_title or \
2758	str(g_id).count("res" + str(self.graph_id)) or \
2759	str(g_id).count(str(self.uid)) > 0:
2760	if str(g_id).count("res" + str(self.graph_id)) > 0:
2761	res_item = [item2.figure, item2.canvas]
2762	else:
2763	# append to the list
2764	graphs.append(item2.figure)
2765	canvases.append(item2.canvas)
2766	except Exception:
2767	# Not for control panels
2768	logger.error(traceback.format_exc())
2769	# Make sure the resduals plot goes to the last
2770	if res_item is not None:
2771	graphs.append(res_item[0])
2772	canvases.append(res_item[1])
2773	# return the list of graphs
2774	return graphs, canvases
2775
2776	def on_function_help_clicked(self, event):
2777	"""
2778	Function called when 'Help' button is pressed next to model
2779	of interest. This calls DocumentationWindow from
2780	documentation_window.py. It will load the top level of the html model
2781	help documenation sphinx generated if either a plugin model (which
2782	normally does not have an html help help file) is selected or if no
2783	model is selected. Otherwise, if a regula model is selected, the
2784	documention for that model will be sent to a browser window.
2785
2786	:todo the quick fix for no documentation in plugins is the if statment.
2787	However, the right way to do this would be to check whether the hmtl
2788	file exists and load the model docs if it does and the general docs if
2789	it doesn't - this will become important if we ever figure out how to
2790	build docs for plugins on the fly. Sep 9, 2018 -PDB
2791
2792	:param event: on Help Button pressed event
2793	"""
2794
2795	if (self.model is not None) and (self.categorybox.GetValue()
2796	!= "Plugin Models"):
2797	name = self.formfactorbox.GetValue()
2798	_TreeLocation = 'user/models/%s.html' % name
2799	_doc_viewer = DocumentationWindow(self, wx.ID_ANY, _TreeLocation,
2800	"", name + " Help")
2801	else:
2802	_TreeLocation = 'user/sasgui/perspectives/fitting/models/index.html'
2803	_doc_viewer = DocumentationWindow(self, wx.ID_ANY, _TreeLocation,
2804	"", "General Model Help")
2805
2806	def on_model_help_clicked(self, event):
2807	"""
2808	Function called when 'Description' button is pressed next to model
2809	of interest. This calls the Description embedded in the model. This
2810	should work with either Wx2.8 and lower or higher. If no model is
2811	selected it will give the message that a model must be chosen first
2812	in the box that would normally contain the description. If a badly
2813	behaved model is encountered which has no description then it will
2814	give the message that none is available.
2815
2816	:param event: on Description Button pressed event
2817	"""
2818
2819	if self.model is None:
2820	name = 'index.html'
2821	else:
2822	name = self.formfactorbox.GetValue()
2823
2824	msg = 'Model description:\n'
2825	info = "Info"
2826	if self.model is not None:
2827	# frame.Destroy()
2828	if str(self.model.description).rstrip().lstrip() == '':
2829	msg += "Sorry, no information is available for this model."
2830	else:
2831	msg += self.model.description + '\n'
2832	wx.MessageBox(msg, info)
2833	else:
2834	msg += "You must select a model to get information on this"
2835	wx.MessageBox(msg, info)
2836
2837	def _on_mag_angle_help(self, event):
2838	"""
2839	Bring up Magnetic Angle definition.png image whenever the ? button
2840	is clicked. Calls DocumentationWindow with the path of the location
2841	within the documentation tree (after /doc/ ....". When using old
2842	versions of Wx (i.e. before 2.9 and therefore not part of release
2843	versions distributed via installer) it brings up an image viewer
2844	box which allows the user to click through the rest of the images in
2845	the directory. Not ideal but probably better than alternative which
2846	would bring up the entire discussion of how magnetic models work?
2847	Specially since it is not likely to be accessed. The normal release
2848	versions bring up the normal image box.
2849
2850	:param evt: Triggers on clicking ? in Magnetic Angles? box
2851	"""
2852
2853	_TreeLocation = "_images/M_angles_pic.png"
2854	_doc_viewer = DocumentationWindow(self, wx.ID_ANY, _TreeLocation, "",
2855	"Magnetic Angle Defintions")
2856
2857	def _on_mag_help(self, event):
2858	"""
2859	Bring up Magnetic Angle definition.png image whenever the ? button
2860	is clicked. Calls DocumentationWindow with the path of the location
2861	within the documentation tree (after /doc/ ....". When using old
2862	versions of Wx (i.e. before 2.9 and therefore not part of release
2863	versions distributed via installer) it brings up an image viewer
2864	box which allows the user to click through the rest of the images in
2865	the directory. Not ideal but probably better than alternative which
2866	would bring up the entire discussion of how magnetic models work?
2867	Specially since it is not likely to be accessed. The normal release
2868	versions bring up the normal image box.
2869
2870	:param evt: Triggers on clicking ? in Magnetic Angles? box
2871	"""
2872
2873	_TreeLocation = "user/sasgui/perspectives/fitting/magnetism/magnetism.html"
2874	_doc_viewer = DocumentationWindow(self, wx.ID_ANY, _TreeLocation, "",
2875	"Polarized Beam/Magnetc Help")
2876
2877	def _on_mag_on(self, event):
2878	"""
2879	Magnetic Parameters ON/OFF
2880	"""
2881	button = event.GetEventObject()
2882
2883	if button.GetLabel().count('ON') > 0:
2884	self.magnetic_on = True
2885	button.SetLabel("Magnetic OFF")
2886	m_value = 1.0e-06
2887	for key in self.model.magnetic_params:
2888	if key.count('M0') > 0:
2889	self.model.setParam(key, m_value)
2890	m_value += 0.5e-06
2891	else:
2892	self.magnetic_on = False
2893	button.SetLabel("Magnetic ON")
2894	for key in self.model.magnetic_params:
2895	if key.count('M0') > 0:
2896	# reset mag value to zero fo safety
2897	self.model.setParam(key, 0.0)
2898
2899	self.Show(False)
2900	self.set_model_param_sizer(self.model)
2901	# self._set_sizer_dispersion()
2902	self.state.magnetic_on = self.magnetic_on
2903	self.SetupScrolling()
2904	self.Show(True)
2905
2906	def on_pd_help_clicked(self, event):
2907	"""
2908	Bring up Polydispersity Documentation whenever the ? button is clicked.
2909	Calls DocumentationWindow with the path of the location within the
2910	documentation tree (after /doc/ ....". Note that when using old
2911	versions of Wx (before 2.9) and thus not the release version of
2912	istallers, the help comes up at the top level of the file as
2913	webbrowser does not pass anything past the # to the browser when it is
2914	running "file:///...."
2915
2916	:param event: Triggers on clicking ? in polydispersity box
2917	"""
2918
2919	_TreeLocation = "user/sasgui/perspectives/fitting/pd/polydispersity.html"
2920	_PageAnchor = ""
2921	_doc_viewer = DocumentationWindow(self, wx.ID_ANY, _TreeLocation,
2922	_PageAnchor, "Polydispersity Help")
2923
2924	def on_left_down(self, event):
2925	"""
2926	Get key stroke event
2927	"""
2928	# Figuring out key combo: Cmd for copy, Alt for paste
2929	if event.CmdDown() and event.ShiftDown():
2930	self.get_paste()
2931	elif event.CmdDown():
2932	self.get_copy()
2933	else:
2934	event.Skip()
2935	return
2936	# make event free
2937	event.Skip()
2938
2939	def get_copy(self):
2940	"""
2941	Get copy params to clipboard
2942	"""
2943	content = self.get_copy_params()
2944	flag = self.set_clipboard(content)
2945	self._copy_info(flag)
2946	return flag
2947
2948	def get_copy_params(self):
2949	"""
2950	Get the string copies of the param names and values in the tap
2951	"""
2952	content = 'sasview_parameter_values:'
2953	# Do it if params exist
2954	if self.parameters:
2955
2956	# go through the parameters
2957	strings = self._get_copy_helper(self.parameters,
2958	self.orientation_params)
2959	content += strings
2960
2961	# go through the fittables
2962	strings = self._get_copy_helper(self.fittable_param,
2963	self.orientation_params_disp)
2964	content += strings
2965
2966	# go through the fixed params
2967	strings = self._get_copy_helper(self.fixed_param,
2968	self.orientation_params_disp)
2969	content += strings
2970
2971	# go through the str params
2972	strings = self._get_copy_helper(self.str_parameters,
2973	self.orientation_params)
2974	content += strings
2975	return content
2976	else:
2977	return False
2978
2979
2980	def _get_copy_params_details(self):
2981	"""
2982	Combines polydisperse parameters with self.parameters so that they can
2983	be written to the clipboard (for Excel or LaTeX). Also returns a list of
2984	the names of parameters that have been fitted
2985
2986	:returns: all_params - A list of all parameters, in the format of
2987	self.parameters
2988	:returns: fitted_par_names - A list of the names of parameters that have
2989	been fitted
2990	"""
2991	# Names of params that are being fitted
2992	fitted_par_names = [param[1] for param in self.param_toFit]
2993	# Names of params with associated polydispersity
2994	disp_params = [param[1].split('.')[0] for param in self.fittable_param]
2995
2996	# Create array of all parameters
2997	all_params = copy.copy(self.parameters)
2998	for param in self.parameters:
2999	if param[1] in disp_params:
3000	# Polydisperse params aren't in self.parameters, so need adding
3001	# to all_params
3002	name = param[1] + ".width"
3003	index = all_params.index(param) + 1
3004	to_insert = []
3005	if name in fitted_par_names:
3006	# Param is fitted, so already has a param list in self.param_toFit
3007	to_insert = self.param_toFit[fitted_par_names.index(name)]
3008	else:
3009	# Param isn't fitted, so mockup a param list
3010	to_insert = [None, name, self.model.getParam(name), None, None]
3011	all_params.insert(index, to_insert)
3012	return all_params, fitted_par_names
3013
3014	def get_copy_excel(self):
3015	"""
3016	Get copy params to clipboard
3017	"""
3018	content = self.get_copy_params_excel()
3019	flag = self.set_clipboard(content)
3020	self._copy_info(flag)
3021	return flag
3022
3023	def get_copy_params_excel(self):
3024	"""
3025	Get the string copies of the param names and values in the tap
3026	"""
3027	if not self.parameters:
3028	# Do nothing if parameters doesn't exist
3029	return False
3030
3031	content = ''
3032	crlf = chr(13) + chr(10)
3033	tab = chr(9)
3034
3035	all_params, fitted_param_names = self._get_copy_params_details()
3036
3037	# Construct row of parameter names
3038	for param in all_params:
3039	name = param[1] # Parameter name
3040	content += name
3041	content += tab
3042	if name in fitted_param_names:
3043	# Only print errors for fitted parameters
3044	content += name + "_err"
3045	content += tab
3046
3047	content += crlf
3048
3049	# Construct row of parameter values and errors
3050	for param in all_params:
3051	value = param[2]
3052	if hasattr(value, 'GetValue'):
3053	# param[2] is a text box
3054	value = value.GetValue()
3055	else:
3056	# param[2] is a float (from our self._get_copy_params_details)
3057	value = str(value)
3058	content += value
3059	content += tab
3060	if param[1] in fitted_param_names:
3061	# Only print errors for fitted parameters
3062	content += param[4].GetValue()
3063	content += tab
3064
3065	return content
3066
3067	def get_copy_latex(self):
3068	"""
3069	Get copy params to clipboard
3070	"""
3071	content = self.get_copy_params_latex()
3072	flag = self.set_clipboard(content)
3073	self._copy_info(flag)
3074	return flag
3075
3076	def get_copy_params_latex(self):
3077	"""
3078	Get the string copies of the param names and values in the tap
3079	"""
3080	if not self.parameters:
3081	# Do nothing if self.parameters doesn't exist
3082	return False
3083
3084	content = r'\begin{table}'
3085	content += r'\begin{tabular}[h]'
3086
3087	crlf = chr(13) + chr(10)
3088	tab = chr(9)
3089
3090	all_params, fitted_param_names = self._get_copy_params_details()
3091
3092	content += '{\|'
3093	for param in all_params:
3094	content += 'l\|l\|'
3095	content += r'}\hline'
3096	content += crlf
3097
3098	# Construct row of parameter names
3099	for index, param in enumerate(all_params):
3100	name = param[1] # Parameter name
3101	content += name.replace('_', r'\_') # Escape underscores
3102	if name in fitted_param_names:
3103	# Only print errors for fitted parameters
3104	content += ' & '
3105	content += name.replace('_', r'\_') + r"\_err"
3106	if index < len(all_params) - 1:
3107	content += ' & '
3108
3109	content += r'\\ \hline'
3110	content += crlf
3111
3112	# Construct row of values and errors
3113	for index, param in enumerate(all_params):
3114	value = param[2]
3115	if hasattr(value, "GetValue"):
3116	# value is a text box
3117	value = value.GetValue()
3118	else:
3119	# value is a float (from self._get_copy_params_details)
3120	value = str(value)
3121	content += value
3122	if param[1] in fitted_param_names:
3123	# Only print errors for fitted params
3124	content += ' & '
3125	content += param[4].GetValue()
3126	if index < len(all_params) - 1:
3127	content += ' & '
3128
3129	content += r'\\ \hline'
3130	content += crlf
3131	content += r'\end{tabular}'
3132	content += r'\end{table}'
3133
3134	return content
3135
3136	def set_clipboard(self, content=None):
3137	"""
3138	Put the string to the clipboard
3139	"""
3140	if not content:
3141	return False
3142	if wx.TheClipboard.Open():
3143	wx.TheClipboard.SetData(wx.TextDataObject(str(content)))
3144	wx.TheClipboard.Close()
3145	return True
3146	return None
3147
3148	def _get_copy_helper(self, param, orient_param):
3149	"""
3150	Helping get value and name of the params
3151
3152	: param param: parameters
3153	: param orient_param = oritational params
3154	: return content: strings [list] [name,value:....]
3155	"""
3156	content = ''
3157	bound_hi = ''
3158	bound_lo = ''
3159	# go through the str params
3160	for item in param:
3161	# copy only the params shown
3162	if not item[2].IsShown():
3163	continue
3164	disfunc = ''
3165	try:
3166	if item[7].__class__.__name__ == 'ComboBox':
3167	disfunc = str(item[7].GetValue())
3168	except Exception:
3169	logger.error(traceback.format_exc())
3170
3171	# 2D
3172	if self.data.__class__.__name__ == "Data2D":
3173	try:
3174	check = item[0].GetValue()
3175	except Exception:
3176	check = None
3177	name = item[1]
3178	value = item[2].GetValue()
3179	# 1D
3180	else:
3181	# for 1D all parameters except orientation
3182	if not item[1] in orient_param:
3183	try:
3184	check = item[0].GetValue()
3185	except:
3186	check = None
3187	name = item[1]
3188	value = item[2].GetValue()
3189
3190	# Bounds
3191	try:
3192	bound_lo = item[5].GetValue()
3193	bound_hi = item[6].GetValue()
3194	except Exception:
3195	# harmless - need to just pass
3196	pass
3197
3198	# add to the content
3199	if disfunc != '':
3200
3201	disfunc = ',' + disfunc
3202	# Need to support array func for copy/paste
3203	try:
3204	if disfunc.count('array') > 0:
3205	disfunc += ','
3206	for val in self.values[name]:
3207	disfunc += ' ' + str(val)
3208	disfunc += ','
3209	for weight in self.weights[name]:
3210	disfunc += ' ' + str(weight)
3211	except Exception:
3212	logger.error(traceback.format_exc())
3213	content += name + ',' + str(check) + ',' + value + disfunc + ',' + \
3214	bound_lo + ',' + bound_hi + ':'
3215
3216	return content
3217
3218	def get_clipboard(self):
3219	"""
3220	Get strings in the clipboard
3221	"""
3222	text = ""
3223	# Get text from the clip board
3224	if wx.TheClipboard.Open():
3225	if wx.TheClipboard.IsSupported(wx.DataFormat(wx.DF_TEXT)):
3226	data = wx.TextDataObject()
3227	# get wx dataobject
3228	success = wx.TheClipboard.GetData(data)
3229	# get text
3230	if success:
3231	text = data.GetText()
3232	else:
3233	text = ''
3234	# close clipboard
3235	wx.TheClipboard.Close()
3236	return text
3237
3238	def get_paste(self):
3239	"""
3240	Paste params from the clipboard
3241	"""
3242	text = self.get_clipboard()
3243	flag = self.get_paste_params(text)
3244	self._copy_info(flag)
3245	return flag
3246
3247	def get_paste_params(self, text=''):
3248	"""
3249	Get the string copies of the param names and values in the tap
3250	"""
3251	context = {}
3252	# put the text into dictionary
3253	lines = text.split(':')
3254	if lines[0] != 'sasview_parameter_values':
3255	self._copy_info(False)
3256	return False
3257	for line in lines[1:-1]:
3258	if len(line) != 0:
3259	item = line.split(',')
3260	check = item[1]
3261	name = item[0]
3262	value = item[2]
3263	# Transfer the text to content[dictionary]
3264	context[name] = [check, value]
3265
3266	# limits
3267	limit_lo = item[3]
3268	context[name].append(limit_lo)
3269	limit_hi = item[4]
3270	context[name].append(limit_hi)
3271
3272	# ToDo: PlugIn this poly disp function for pasting
3273	try:
3274	poly_func = item[5]
3275	context[name].append(poly_func)
3276	try:
3277	# take the vals and weights for array
3278	array_values = item[6].split(' ')
3279	array_weights = item[7].split(' ')
3280	val = [float(a_val) for a_val in array_values[1:]]
3281	weit = [float(a_weit) for a_weit in array_weights[1:]]
3282
3283	context[name].append(val)
3284	context[name].append(weit)
3285	except:
3286	raise
3287	except:
3288	poly_func = ''
3289	context[name].append(poly_func)
3290
3291	# Do it if params exist
3292	if self.parameters:
3293	# go through the parameters
3294	self._get_paste_helper(self.parameters,
3295	self.orientation_params, context)
3296
3297	# go through the fittables
3298	self._get_paste_helper(self.fittable_param,
3299	self.orientation_params_disp,
3300	context)
3301
3302	# go through the fixed params
3303	self._get_paste_helper(self.fixed_param,
3304	self.orientation_params_disp, context)
3305
3306	# go through the str params
3307	self._get_paste_helper(self.str_parameters,
3308	self.orientation_params, context)
3309
3310	return True
3311	return None
3312
3313	def _get_paste_helper(self, param, orient_param, content):
3314	"""
3315	Helping set values of the params
3316
3317	: param param: parameters
3318	: param orient_param: oritational params
3319	: param content: dictionary [ name, value: name1.value1,...]
3320	"""
3321	# go through the str params
3322	for item in param:
3323	# 2D
3324	if self.data.__class__.__name__ == "Data2D":
3325	name = item[1]
3326	if name in content.keys():
3327	values = content[name]
3328	check = values[0]
3329	pd = values[1]
3330
3331	if name.count('.') > 0:
3332	# If this is parameter.width, then pd may be a floating
3333	# point value or it may be an array distribution.
3334	# Nothing to do for parameter.npts or parameter.nsigmas.
3335	try:
3336	float(pd)
3337	if name.endswith('.npts'):
3338	pd = int(pd)
3339	except Exception:
3340	# continue
3341	if not pd and pd != '':
3342	continue
3343	item[2].SetValue(str(pd))
3344	if item in self.fixed_param and pd == '':
3345	# Only array func has pd == '' case.
3346	item[2].Enable(False)
3347	else:
3348	item[2].Enable(True)
3349	if item[2].__class__.__name__ == "ComboBox":
3350	if content[name][1] in self.model.fun_list:
3351	fun_val = self.model.fun_list.index(content[name][1])
3352	self.model.setParam(name, fun_val)
3353	try:
3354	item[5].SetValue(str(values[-3]))
3355	item[6].SetValue(str(values[-2]))
3356	except Exception:
3357	# passing as harmless non-update
3358	pass
3359
3360	value = content[name][1:]
3361	self._paste_poly_help(item, value)
3362	if check == 'True':
3363	is_true = True
3364	elif check == 'False':
3365	is_true = False
3366	else:
3367	is_true = None
3368	if is_true is not None:
3369	item[0].SetValue(is_true)
3370	# 1D
3371	else:
3372	# for 1D all parameters except orientation
3373	if not item[1] in orient_param:
3374	name = item[1]
3375	if name in content.keys():
3376	check = content[name][0]
3377	# Avoid changing combox content
3378	value = content[name][1:]
3379	pd = value[0]
3380	if name.count('.') > 0:
3381	# If this is parameter.width, then pd may be a
3382	# floating point value or it may be an array
3383	# distribution. Nothing to do for parameter.npts or
3384	# parameter.nsigmas.
3385	try:
3386	pd = float(pd)
3387	if name.endswith('.npts'):
3388	pd = int(pd)
3389	except Exception:
3390	# continue
3391	if not pd and pd != '':
3392	continue
3393	item[2].SetValue(str(pd))
3394	if item in self.fixed_param and pd == '':
3395	# Only array func has pd == '' case.
3396	item[2].Enable(False)
3397	else:
3398	item[2].Enable(True)
3399	if item[2].__class__.__name__ == "ComboBox":
3400	if value[0] in self.model.fun_list:
3401	fun_val = self.model.fun_list.index(value[0])
3402	self.model.setParam(name, fun_val)
3403	# save state
3404	try:
3405	item[5].SetValue(str(value[-3]))
3406	item[6].SetValue(str(value[-2]))
3407	except Exception:
3408	# passing as harmless non-update
3409	pass
3410
3411	self._paste_poly_help(item, value)
3412	if check == 'True':
3413	is_true = True
3414	elif check == 'False':
3415	is_true = False
3416	else:
3417	is_true = None
3418	if is_true is not None:
3419	item[0].SetValue(is_true)
3420
3421	self.select_param(event=None)
3422	self.Refresh()
3423
3424	def _paste_poly_help(self, item, value):
3425	"""
3426	Helps get paste for poly function
3427
3428	item is the parameter name
3429
3430	value depends on which parameter is being processed, and whether it
3431	has array polydispersity.
3432
3433	For parameters without array polydispersity:
3434
3435	parameter => ['FLOAT', '']
3436	parameter.width => ['FLOAT', 'DISTRIBUTION', '']
3437	parameter.npts => ['FLOAT', '']
3438	parameter.nsigmas => ['FLOAT', '']
3439
3440	For parameters with array polydispersity:
3441
3442	parameter => ['FLOAT', '']
3443	parameter.width => ['FILENAME', 'array', [x1, ...], [w1, ...]]
3444	parameter.npts => ['FLOAT', '']
3445	parameter.nsigmas => ['FLOAT', '']
3446	"""
3447	# Do nothing if not setting polydispersity
3448	if len(value[3]) == 0:
3449	return
3450
3451	try:
3452	name = item[7].Name
3453	param_name = name.split('.')[0]
3454	item[7].SetValue(value[1])
3455	selection = item[7].GetCurrentSelection()
3456	dispersity = item[7].GetClientData(selection)
3457	disp_model = dispersity()
3458
3459	if value[1] == 'array':
3460	pd_vals = np.array(value[2])
3461	pd_weights = np.array(value[3])
3462	if len(pd_vals) == 0 or len(pd_vals) != len(pd_weights):
3463	msg = ("bad array distribution parameters for %s"
3464	% param_name)
3465	raise ValueError(msg)
3466	self._set_disp_cb(True, item=item)
3467	self._set_array_disp_model(name=name,
3468	disp=disp_model,
3469	values=pd_vals,
3470	weights=pd_weights)
3471	else:
3472	self._set_disp_cb(False, item=item)
3473	self._disp_obj_dict[name] = disp_model
3474	self.model.set_dispersion(param_name, disp_model)
3475	self.state.disp_obj_dict[name] = disp_model.type
3476	# TODO: It's not an array, why update values and weights?
3477	self.model._persistency_dict[param_name] = \
3478	[self.values, self.weights]
3479	self.state.values = self.values
3480	self.state.weights = self.weights
3481
3482	except Exception:
3483	logger.error(traceback.format_exc())
3484	print("Error in BasePage._paste_poly_help: %s" % \
3485	sys.exc_info()[1])
3486
3487	def _set_disp_cb(self, isarray, item):
3488	"""
3489	Set cb for array disp
3490	"""
3491	if isarray:
3492	item[0].SetValue(False)
3493	item[0].Enable(False)
3494	item[2].Enable(False)
3495	item[3].Show(False)
3496	item[4].Show(False)
3497	item[5].SetValue('')
3498	item[5].Enable(False)
3499	item[6].SetValue('')
3500	item[6].Enable(False)
3501	else:
3502	item[0].Enable()
3503	item[2].Enable()
3504	item[3].Show(True)
3505	item[4].Show(True)
3506	item[5].Enable()
3507	item[6].Enable()
3508
3509	def update_pinhole_smear(self):
3510	"""
3511	Method to be called by sub-classes
3512	Moveit; This method doesn't belong here
3513	"""
3514	print("BasicPage.update_pinhole_smear was called: skipping")
3515	return
3516
3517	def _read_category_info(self):
3518	"""
3519	Reads the categories in from file
3520	"""
3521	# # ILL mod starts here - July 2012 kieranrcampbell@gmail.com
3522	self.master_category_dict = defaultdict(list)
3523	self.by_model_dict = defaultdict(list)
3524	self.model_enabled_dict = defaultdict(bool)
3525	categorization_file = CategoryInstaller.get_user_file()
3526	with open(categorization_file, 'rb') as f:
3527	self.master_category_dict = json.load(f)
3528	self._regenerate_model_dict()
3529
3530	def _regenerate_model_dict(self):
3531	"""
3532	regenerates self.by_model_dict which has each model name as the
3533	key and the list of categories belonging to that model
3534	along with the enabled mapping
3535	"""
3536	self.by_model_dict = defaultdict(list)
3537	for category in self.master_category_dict:
3538	for (model, enabled) in self.master_category_dict[category]:
3539	self.by_model_dict[model].append(category)
3540	self.model_enabled_dict[model] = enabled
3541
3542	def _populate_listbox(self):
3543	"""
3544	fills out the category list box
3545	"""
3546	uncat_str = 'Plugin Models'
3547	self._read_category_info()
3548
3549	self.categorybox.Clear()
3550	cat_list = sorted(self.master_category_dict.keys())
3551	if uncat_str not in cat_list:
3552	cat_list.append(uncat_str)
3553
3554	for category in cat_list:
3555	if category != '':
3556	self.categorybox.Append(category)
3557
3558	if self.categorybox.GetSelection() == wx.NOT_FOUND:
3559	self.categorybox.SetSelection(0)
3560	else:
3561	self.categorybox.SetSelection(
3562	self.categorybox.GetSelection())
3563	# self._on_change_cat(None)
3564
3565	def _on_change_cat(self, event):
3566	"""
3567	Callback for category change action
3568	"""
3569	self.model_name = None
3570	category = self.categorybox.GetStringSelection()
3571	if category is None:
3572	return
3573	self.model_box.Clear()
3574
3575	if category == CUSTOM_MODEL:
3576	for model in self.model_list_box[category]:
3577	str_m = str(model).split(".")[0]
3578	self.model_box.Append(str_m)
3579
3580	else:
3581	for model, enabled in sorted(self.master_category_dict[category],
3582	key=lambda name: name[0]):
3583	if enabled:
3584	self.model_box.Append(model)
3585
3586	def _fill_model_sizer(self, sizer):
3587	"""
3588	fill sizer containing model info
3589	"""
3590	# This should only be called once per fit tab
3591	# print "==== Entering _fill_model_sizer"
3592	# Add model function Details button in fitpanel.
3593	# The following 3 lines are for Mac. Let JHC know before modifying...
3594	title = "Model"
3595	self.formfactorbox = None
3596	self.multifactorbox = None
3597	self.mbox_description = wx.StaticBox(self, wx.ID_ANY, str(title))
3598	boxsizer1 = wx.StaticBoxSizer(self.mbox_description, wx.VERTICAL)
3599	sizer_cat = wx.BoxSizer(wx.HORIZONTAL)
3600	self.mbox_description.SetForegroundColour(wx.RED)
3601	wx_id = self._ids.next()
3602	self.model_func = wx.Button(self, wx_id, 'Help', size=(80, 23))
3603	self.model_func.Bind(wx.EVT_BUTTON, self.on_function_help_clicked,
3604	id=wx_id)
3605	self.model_func.SetToolTipString("Full Model Function Help")
3606	wx_id = self._ids.next()
3607	self.model_help = wx.Button(self, wx_id, 'Description', size=(80, 23))
3608	self.model_help.Bind(wx.EVT_BUTTON, self.on_model_help_clicked,
3609	id=wx_id)
3610	self.model_help.SetToolTipString("Short Model Function Description")
3611	wx_id = self._ids.next()
3612	self.model_view = wx.Button(self, wx_id, "Show 2D", size=(80, 23))
3613	self.model_view.Bind(wx.EVT_BUTTON, self._onModel2D, id=wx_id)
3614	hint = "toggle view of model from 1D to 2D or 2D to 1D"
3615	self.model_view.SetToolTipString(hint)
3616
3617	cat_set_box = wx.StaticBox(self, wx.ID_ANY, 'Category')
3618	sizer_cat_box = wx.StaticBoxSizer(cat_set_box, wx.HORIZONTAL)
3619	sizer_cat_box.SetMinSize((200, 50))
3620	self.categorybox = wx.ComboBox(self, wx.ID_ANY,
3621	style=wx.CB_READONLY)
3622	self.categorybox.SetToolTip(wx.ToolTip("Select a Category/Type"))
3623	self._populate_listbox()
3624	wx.EVT_COMBOBOX(self.categorybox, wx.ID_ANY, self._show_combox)
3625	# self.shape_rbutton = wx.RadioButton(self, wx.ID_ANY, 'Shapes',
3626	# style=wx.RB_GROUP)
3627	# self.shape_indep_rbutton = wx.RadioButton(self, wx.ID_ANY,
3628	# "Shape-Independent")
3629	# self.struct_rbutton = wx.RadioButton(self, wx.ID_ANY,
3630	# "Structure Factor ")
3631	# self.plugin_rbutton = wx.RadioButton(self, wx.ID_ANY,
3632	# "Uncategorized")
3633
3634	# self.Bind(wx.EVT_RADIOBUTTON, self._show_combox,
3635	# id=self.shape_rbutton.GetId())
3636	# self.Bind(wx.EVT_RADIOBUTTON, self._show_combox,
3637	# id=self.shape_indep_rbutton.GetId())
3638	# self.Bind(wx.EVT_RADIOBUTTON, self._show_combox,
3639	# id=self.struct_rbutton.GetId())
3640	# self.Bind(wx.EVT_RADIOBUTTON, self._show_combox,
3641	# id=self.plugin_rbutton.GetId())
3642	# MAC needs SetValue
3643
3644	show_cat_button = wx.Button(self, wx.ID_ANY, "Modify")
3645	cat_tip = "Modify model categories \n"
3646	cat_tip += "(also accessible from the menu bar)."
3647	show_cat_button.SetToolTip(wx.ToolTip(cat_tip))
3648	show_cat_button.Bind(wx.EVT_BUTTON, self._on_modify_cat)
3649	sizer_cat_box.Add(self.categorybox, 1, wx.RIGHT, 3)
3650	sizer_cat_box.Add((10, 10))
3651	sizer_cat_box.Add(show_cat_button)
3652	# self.shape_rbutton.SetValue(True)
3653
3654	sizer_radiobutton = wx.GridSizer(2, 2, 5, 5)
3655	# sizer_radiobutton.Add(self.shape_rbutton)
3656	# sizer_radiobutton.Add(self.shape_indep_rbutton)
3657	sizer_radiobutton.Add((5, 5))
3658	sizer_radiobutton.Add(self.model_view, 1, wx.RIGHT, 5)
3659	# sizer_radiobutton.Add(self.plugin_rbutton)
3660	# sizer_radiobutton.Add(self.struct_rbutton)
3661	# sizer_radiobutton.Add((5,5))
3662	sizer_radiobutton.Add(self.model_help, 1, wx.RIGHT \| wx.LEFT, 5)
3663	# sizer_radiobutton.Add((5,5))
3664	sizer_radiobutton.Add(self.model_func, 1, wx.RIGHT, 5)
3665	sizer_cat.Add(sizer_cat_box, 1, wx.LEFT, 2.5)
3666	sizer_cat.Add(sizer_radiobutton)
3667	sizer_selection = wx.BoxSizer(wx.HORIZONTAL)
3668	mutifactor_selection = wx.BoxSizer(wx.HORIZONTAL)
3669
3670	self.text1 = wx.StaticText(self, wx.ID_ANY, "")
3671	self.text2 = wx.StaticText(self, wx.ID_ANY, "P(Q)*S(Q)")
3672	self.mutifactor_text = wx.StaticText(self, wx.ID_ANY, "No. of Shells: ")
3673	self.mutifactor_text1 = wx.StaticText(self, wx.ID_ANY, "")
3674	self.show_sld_button = wx.Button(self, wx.ID_ANY, "Show SLD Profile")
3675	self.show_sld_button.Bind(wx.EVT_BUTTON, self._on_show_sld)
3676
3677	self.formfactorbox = wx.ComboBox(self, wx.ID_ANY, style=wx.CB_READONLY)
3678	self.formfactorbox.SetToolTip(wx.ToolTip("Select a Model"))
3679	if self.model is not None:
3680	self.formfactorbox.SetValue(self.model.name)
3681	self.structurebox = wx.ComboBox(self, wx.ID_ANY, style=wx.CB_READONLY)
3682	self.multifactorbox = wx.ComboBox(self, wx.ID_ANY, style=wx.CB_READONLY)
3683	self.initialize_combox()
3684	wx.EVT_COMBOBOX(self.formfactorbox, wx.ID_ANY, self._on_select_model)
3685
3686	wx.EVT_COMBOBOX(self.structurebox, wx.ID_ANY, self._on_select_model)
3687	wx.EVT_COMBOBOX(self.multifactorbox, wx.ID_ANY, self._on_select_model)
3688	# check model type to show sizer
3689	if self.model is not None:
3690	print("_set_model_sizer_selection: disabled.")
3691	# self._set_model_sizer_selection(self.model)
3692
3693	sizer_selection.Add(self.text1)
3694	sizer_selection.Add((10, 5))
3695	sizer_selection.Add(self.formfactorbox)
3696	sizer_selection.Add((5, 5))
3697	sizer_selection.Add(self.text2)
3698	sizer_selection.Add((5, 5))
3699	sizer_selection.Add(self.structurebox)
3700
3701	mutifactor_selection.Add((13, 5))
3702	mutifactor_selection.Add(self.mutifactor_text)
3703	mutifactor_selection.Add(self.multifactorbox)
3704	mutifactor_selection.Add((5, 5))
3705	mutifactor_selection.Add(self.mutifactor_text1)
3706	mutifactor_selection.Add((10, 5))
3707	mutifactor_selection.Add(self.show_sld_button)
3708
3709	boxsizer1.Add(sizer_cat)
3710	boxsizer1.Add((10, 10))
3711	boxsizer1.Add(sizer_selection)
3712	boxsizer1.Add((10, 10))
3713	boxsizer1.Add(mutifactor_selection)
3714
3715	self._set_multfactor_combobox()
3716	self.multifactorbox.SetSelection(1)
3717	self.show_sld_button.Hide()
3718	sizer.Add(boxsizer1, 0, wx.EXPAND \| wx.ALL, 10)
3719	sizer.Layout()
3720
3721	def on_smear_helper(self, update=False):
3722	"""
3723	Help for onSmear if implemented
3724
3725	:param update: force or not to update
3726	"""
3727	def reset_page(self, state, first=False):
3728	"""
3729	reset the state if implemented
3730	"""
3731	def onSmear(self, event):
3732	"""
3733	Create a smear object if implemented
3734	"""
3735	def onPinholeSmear(self, event):
3736	"""
3737	Create a custom pinhole smear object if implemented
3738	"""
3739	def onSlitSmear(self, event):
3740	"""
3741	Create a custom slit smear object if implemented
3742	"""
3743	def update_slit_smear(self):
3744	"""
3745	called by kill_focus on pinhole TextCntrl
3746	to update the changes if implemented
3747	"""
3748	def select_param(self, event):
3749	"""
3750	Select TextCtrl checked if implemented
3751	"""
3752	def set_data(self, data=None):
3753	"""
3754	Sets data if implemented
3755	"""
3756	def _is_2D(self):
3757	"""
3758	Check if data_name is Data2D if implemented
3759	"""
3760	def _on_select_model(self, event=None):
3761	"""
3762	call back for model selection if implemented
3763	"""
3764	def get_weight_flag(self):
3765	"""
3766	Get flag corresponding to a given weighting dI data if implemented
3767	"""
3768	def _set_sizer_dispersion(self):
3769	"""
3770	draw sizer for dispersity if implemented
3771	"""
3772	def get_all_checked_params(self):
3773	"""
3774	Found all parameters current check and add them to list of parameters
3775	to fit if implemented
3776	"""
3777	def show_npts2fit(self):
3778	"""
3779	setValue Npts for fitting if implemented
3780	"""
3781	def _onModel2D(self, event):
3782	"""
3783	toggle view of model from 1D to 2D or 2D from 1D if implemented
3784	"""
3785
3786
3787	class ModelTextCtrl(wx.TextCtrl):
3788	"""
3789	Text control for model and fit parameters.
3790	Binds the appropriate events for user interactions.
3791	Default callback methods can be overwritten on initialization
3792
3793	:param kill_focus_callback: callback method for EVT_KILL_FOCUS event
3794	:param set_focus_callback: callback method for EVT_SET_FOCUS event
3795	:param mouse_up_callback: callback method for EVT_LEFT_UP event
3796	:param text_enter_callback: callback method for EVT_TEXT_ENTER event
3797
3798	"""
3799	# Set to True when the mouse is clicked while whole string is selected
3800	full_selection = False
3801	# Call back for EVT_SET_FOCUS events
3802	_on_set_focus_callback = None
3803
3804	def __init__(self, parent, id=-1,
3805	value=wx.EmptyString,
3806	pos=wx.DefaultPosition,
3807	size=wx.DefaultSize,
3808	style=0,
3809	validator=wx.DefaultValidator,
3810	name=wx.TextCtrlNameStr,
3811	kill_focus_callback=None,
3812	set_focus_callback=None,
3813	mouse_up_callback=None,
3814	text_enter_callback=None):
3815
3816	wx.TextCtrl.__init__(self, parent, id, value, pos,
3817	size, style, validator, name)
3818
3819	# Bind appropriate events
3820	self._on_set_focus_callback = parent.onSetFocus \
3821	if set_focus_callback is None else set_focus_callback
3822	self.Bind(wx.EVT_SET_FOCUS, self._on_set_focus)
3823	self.Bind(wx.EVT_KILL_FOCUS, self._silent_kill_focus
3824	if kill_focus_callback is None else kill_focus_callback)
3825	self.Bind(wx.EVT_TEXT_ENTER, parent._onparamEnter
3826	if text_enter_callback is None else text_enter_callback)
3827	if not ON_MAC:
3828	self.Bind(wx.EVT_LEFT_UP, self._highlight_text
3829	if mouse_up_callback is None else mouse_up_callback)
3830
3831	def _on_set_focus(self, event):
3832	"""
3833	Catch when the text control is set in focus to highlight the whole
3834	text if necessary
3835
3836	:param event: mouse event
3837
3838	"""
3839	event.Skip()
3840	self.full_selection = True
3841	return self._on_set_focus_callback(event)
3842
3843	def _highlight_text(self, event):
3844	"""
3845	Highlight text of a TextCtrl only of no text has be selected
3846
3847	:param event: mouse event
3848
3849	"""
3850	# Make sure the mouse event is available to other listeners
3851	event.Skip()
3852	control = event.GetEventObject()
3853	if self.full_selection:
3854	self.full_selection = False
3855	# Check that we have a TextCtrl
3856	if issubclass(control.__class__, wx.TextCtrl):
3857	# Check whether text has been selected,
3858	# if not, select the whole string
3859	(start, end) = control.GetSelection()
3860	if start == end:
3861	control.SetSelection(-1, -1)
3862
3863	def _silent_kill_focus(self, event):
3864	"""
3865	Save the state of the page
3866	"""
3867
3868	event.Skip()
3869	# pass

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SasView

source: sasview/src/sas/sasgui/perspectives/fitting/basepage.py @ 926ece5

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