1 | #include <cstdlib> |
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2 | #include <iostream> |
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3 | #include <fstream> |
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4 | #include <vector> |
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5 | #include "lores_model.h" |
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6 | #include "sphere.h" |
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7 | #include "cylinder.h" |
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8 | #include "ellipsoid.h" |
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9 | #include "Point3D.h" |
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10 | |
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11 | using namespace std; |
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12 | |
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13 | void test_calculateIQ(LORESModel &lm); |
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14 | |
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15 | void WritePointsCoor(vector<Point3D> &vp){ |
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16 | ofstream outfile("testcc.coor"); |
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17 | for(size_t i=0; i<vp.size(); ++i){ |
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18 | outfile<<vp[i].getX()<<" "<<vp[i].getY()<<" "<<vp[i].getZ()<<" "<<1.0<<endl; |
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19 | } |
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20 | } |
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21 | |
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22 | void test_lores(){ |
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23 | |
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24 | LORESModel lm(0.5); |
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25 | cout << "density is:" << lm.GetDensity() << endl; |
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26 | |
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27 | Sphere s1(10); |
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28 | s1.SetOrientation(10,10,20); |
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29 | s1.SetCenter(10,10,10); |
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30 | lm.Add(s1,1.0); |
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31 | |
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32 | Cylinder c1(5,20); |
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33 | c1.SetCenter(0,0,0); |
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34 | c1.SetOrientation(10,20,30); |
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35 | lm.Add(c1,1.0); |
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36 | |
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37 | /* |
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38 | Cylinder c2(40,100); |
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39 | c2.SetCenter(-30,-40,-35); |
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40 | lm.Add(c2,1.0); |
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41 | */ |
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42 | /* |
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43 | Ellipsoid e1(20,15,10); |
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44 | e1.SetCenter(0,0,0); |
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45 | e1.SetOrientation(10,10,20); |
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46 | lm.Add(e1,1.0); |
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47 | */ |
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48 | /*test multiple spheres |
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49 | int range = 20; |
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50 | int r = 5; |
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51 | for (int k = 0; k < 1000; ++k) { |
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52 | Sphere s(r + rand() % r); |
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53 | s.SetCenter(rand() % range, rand() % range, rand() % range); |
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54 | lm.Add(s, 1.0); |
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55 | } |
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56 | */ |
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57 | /* |
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58 | Sphere s1(10); |
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59 | cout << "sphere information:" << s1.GetVolume() << " " << s1.GetRadius() <<endl; |
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60 | s1.SetOrientation(10,20,10); |
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61 | s1.SetCenter(1,5,2); |
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62 | lm.Add(s1,1.0); |
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63 | |
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64 | Sphere s2(15); |
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65 | s2.SetCenter(20,20,20); |
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66 | lm.Add(s2,2.0); |
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67 | |
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68 | Sphere s3(5); |
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69 | s3.SetCenter(0,0,0); |
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70 | lm.Add(s3,2.0); |
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71 | |
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72 | Sphere s4(5); |
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73 | s4.SetCenter(0,0,10); |
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74 | lm.Add(s4,2.0); |
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75 | |
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76 | Sphere s5(10); |
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77 | s5.SetCenter(20,0,0); |
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78 | lm.Add(s5,2.0); |
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79 | */ |
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80 | |
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81 | test_calculateIQ(lm); |
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82 | } |
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83 | |
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84 | void test_calculateIQ(LORESModel &lm){ |
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85 | |
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86 | IQ iq1(10,0.001,0.3); |
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87 | cout << "iq information:" << iq1.GetQmin() <<endl; |
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88 | |
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89 | vector<Point3D> vp; |
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90 | lm.GetPoints(vp); |
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91 | WritePointsCoor(vp); |
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92 | cout << "vp size:" <<vp.size()<<endl; |
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93 | cout << "save into pdb file" << endl; |
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94 | lm.OutputPDB(vp,"model.pdb"); |
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95 | |
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96 | // for (vector<Point3D>::iterator iter = vp.begin(); |
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97 | // iter != vp.end(); ++iter){ |
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98 | // cout << *iter << endl; |
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99 | //} |
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100 | |
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101 | lm.DistDistribution(vp); |
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102 | Array2D<double> pr(lm.GetPr()); |
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103 | //for(int i = 0; i< pr.dim1(); ++i) |
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104 | // cout << pr[i][0] << " " << pr[i][1] << " " << pr[i][2] << endl; |
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105 | lm.OutputPR("test.pr"); |
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106 | cout << "pass ddfunction, and print out the pr file" <<endl; |
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107 | |
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108 | lm.CalculateIQ(&iq1); |
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109 | cout <<"I(Q): \n" ; |
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110 | //for (int i = 0; i< iq1.iq_data.dim1(); i++) |
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111 | // cout << iq1.iq_data[i][0]<< " " << iq1.iq_data[i][1] <<endl; |
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112 | } |
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113 | |
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114 | void test_lores2d(){ |
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115 | |
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116 | LORESModel lm(0.1); |
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117 | |
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118 | Cylinder c1(5,20); |
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119 | c1.SetCenter(0,0,0); |
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120 | c1.SetOrientation(10,20,30); |
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121 | lm.Add(c1,1.0); |
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122 | |
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123 | vector<Point3D> vp; |
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124 | lm.GetPoints(vp); |
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125 | |
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126 | lm.DistDistributionXY(vp); |
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127 | lm.OutputPR_XY("test2d.pr"); |
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128 | |
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129 | IQ iq(10,0.001,0.3); |
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130 | lm.CalculateIQ_2D(&iq,10); |
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131 | |
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132 | iq.OutputIQ("test2d.iq"); |
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133 | } |
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134 | |
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135 | void test_lores2d_qxqy(){ |
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136 | |
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137 | LORESModel lm(0.1); |
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138 | |
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139 | Cylinder c1(5,20); |
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140 | c1.SetCenter(0,0,0); |
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141 | c1.SetOrientation(10,20,30); |
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142 | lm.Add(c1,1.0); |
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143 | |
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144 | vector<Point3D> vp; |
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145 | lm.GetPoints(vp); |
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146 | |
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147 | lm.DistDistributionXY(vp); |
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148 | |
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149 | double aI = lm.CalculateIQ_2D(0.1,0.2); |
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150 | |
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151 | cout << " a single I is: "<<aI<<" at Qx,Qy = 0.1,0.2" <<endl; |
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152 | } |
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153 | |
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154 | void test_GetCenter() |
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155 | { |
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156 | LORESModel lm(0.1); |
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157 | |
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158 | Sphere s1(10); |
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159 | s1.SetCenter(-1,-1,-1); |
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160 | Sphere s2(20); |
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161 | s2.SetCenter(1,1,1); |
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162 | |
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163 | lm.Add(s1,1.0); |
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164 | lm.Add(s2,1.0); |
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165 | |
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166 | vector<double> center(3); |
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167 | center = lm.GetCenter(); |
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168 | |
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169 | cout << "center should be (0,0,0) after adding two spheres:"<<endl; |
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170 | cout << center[0] <<" "<< center[1] <<" "<< center[2]<<endl; |
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171 | |
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172 | } |
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173 | |
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174 | void test_CalSingleI(){ |
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175 | LORESModel lm(0.1); |
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176 | |
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177 | Cylinder cyn(10,40); |
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178 | |
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179 | lm.Add(cyn,1.0); |
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180 | |
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181 | vector<Point3D> vp; |
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182 | lm.GetPoints(vp); |
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183 | |
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184 | lm.DistDistribution(vp); |
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185 | |
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186 | double result = lm.CalculateIQ(0.1); |
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187 | cout << "The I(0.1) is: " << result << endl; |
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188 | } |
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189 | |
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190 | int main(){ |
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191 | |
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192 | printf("this\n"); |
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193 | cout << "Start" << endl; |
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194 | //test_lores(); |
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195 | cout <<"testing DistDistributionXY"<<endl; |
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196 | test_lores2d(); |
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197 | |
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198 | cout <<"testing GetCenter (center of the list of shapes)"<<endl; |
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199 | test_GetCenter(); |
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200 | |
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201 | cout <<"testing calculate_2d(Qx,Qy)"<<endl; |
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202 | test_lores2d_qxqy(); |
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203 | cout << "Pass" << endl; |
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204 | |
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205 | cout <<"testing CalculateIQ(q)"<<endl; |
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206 | test_CalSingleI(); |
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207 | |
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208 | return 0; |
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209 | } |
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