[57be490] | 1 | # -*- coding: utf-8 -*- |
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[f721030] | 2 | """ |
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[28a84e9] | 3 | Global defaults and various utility functions usable by the general GUI |
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[f721030] | 4 | """ |
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| 5 | |
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| 6 | import os |
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[dc5ef15] | 7 | import re |
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[f721030] | 8 | import sys |
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| 9 | import imp |
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| 10 | import warnings |
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[f82ab8c] | 11 | import webbrowser |
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[b3e8629] | 12 | import urllib.parse |
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[f82ab8c] | 13 | |
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[3b8cc00] | 14 | import numpy as np |
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| 15 | |
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[f721030] | 16 | warnings.simplefilter("ignore") |
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| 17 | import logging |
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| 18 | |
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[4992ff2] | 19 | from PyQt5 import QtCore |
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| 20 | from PyQt5 import QtGui |
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| 21 | from PyQt5 import QtWidgets |
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[f721030] | 22 | |
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[e4676c8] | 23 | from periodictable import formula as Formula |
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[dc5ef15] | 24 | from sas.qtgui.Plotting import DataTransform |
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| 25 | from sas.qtgui.Plotting.ConvertUnits import convertUnit |
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| 26 | from sas.qtgui.Plotting.PlotterData import Data1D |
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| 27 | from sas.qtgui.Plotting.PlotterData import Data2D |
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[28a84e9] | 28 | from sas.sascalc.dataloader.loader import Loader |
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[dc5ef15] | 29 | from sas.qtgui.Utilities import CustomDir |
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[f721030] | 30 | |
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[fef38e8] | 31 | ## TODO: CHANGE FOR SHIPPED PATH IN RELEASE |
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| 32 | if os.path.splitext(sys.argv[0])[1].lower() != ".py": |
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| 33 | HELP_DIRECTORY_LOCATION = "doc" |
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| 34 | else: |
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| 35 | HELP_DIRECTORY_LOCATION = "docs/sphinx-docs/build/html" |
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| 36 | IMAGES_DIRECTORY_LOCATION = HELP_DIRECTORY_LOCATION + "/_images" |
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[f721030] | 37 | |
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[fd7ef36] | 38 | # This matches the ID of a plot created using FittingLogic._create1DPlot, e.g. |
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| 39 | # "5 [P(Q)] modelname" |
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| 40 | # or |
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| 41 | # "4 modelname". |
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| 42 | # Useful for determining whether the plot in question is for an intermediate result, such as P(Q) or S(Q) in the |
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| 43 | # case of a product model; the identifier for this is held in square brackets, as in the example above. |
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| 44 | theory_plot_ID_pattern = re.compile(r"^([0-9]+)\s+(\[(.*)\]\s+)?(.*)$") |
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| 45 | |
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[f721030] | 46 | def get_app_dir(): |
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| 47 | """ |
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| 48 | The application directory is the one where the default custom_config.py |
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| 49 | file resides. |
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| 50 | |
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| 51 | :returns: app_path - the path to the applicatin directory |
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| 52 | """ |
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| 53 | # First, try the directory of the executable we are running |
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| 54 | app_path = sys.path[0] |
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| 55 | if os.path.isfile(app_path): |
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| 56 | app_path = os.path.dirname(app_path) |
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| 57 | if os.path.isfile(os.path.join(app_path, "custom_config.py")): |
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| 58 | app_path = os.path.abspath(app_path) |
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[31c5b58] | 59 | #logging.info("Using application path: %s", app_path) |
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[f721030] | 60 | return app_path |
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| 61 | |
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| 62 | # Next, try the current working directory |
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| 63 | if os.path.isfile(os.path.join(os.getcwd(), "custom_config.py")): |
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[31c5b58] | 64 | #logging.info("Using application path: %s", os.getcwd()) |
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[f721030] | 65 | return os.path.abspath(os.getcwd()) |
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| 66 | |
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| 67 | # Finally, try the directory of the sasview module |
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| 68 | # TODO: gui_manager will have to know about sasview until we |
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| 69 | # clean all these module variables and put them into a config class |
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| 70 | # that can be passed by sasview.py. |
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[6cb305a] | 71 | # logging.info(sys.executable) |
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| 72 | # logging.info(str(sys.argv)) |
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[f721030] | 73 | from sas import sasview as sasview |
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| 74 | app_path = os.path.dirname(sasview.__file__) |
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[6cb305a] | 75 | # logging.info("Using application path: %s", app_path) |
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[f721030] | 76 | return app_path |
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| 77 | |
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| 78 | def get_user_directory(): |
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| 79 | """ |
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| 80 | Returns the user's home directory |
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| 81 | """ |
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| 82 | userdir = os.path.join(os.path.expanduser("~"), ".sasview") |
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| 83 | if not os.path.isdir(userdir): |
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| 84 | os.makedirs(userdir) |
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| 85 | return userdir |
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| 86 | |
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[481ff26] | 87 | def _find_local_config(confg_file, path): |
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[f721030] | 88 | """ |
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| 89 | Find configuration file for the current application |
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| 90 | """ |
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| 91 | config_module = None |
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| 92 | fObj = None |
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| 93 | try: |
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[481ff26] | 94 | fObj, path_config, descr = imp.find_module(confg_file, [path]) |
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| 95 | config_module = imp.load_module(confg_file, fObj, path_config, descr) |
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[e540cd2] | 96 | except ImportError: |
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[31c5b58] | 97 | pass |
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| 98 | #logging.error("Error loading %s/%s: %s" % (path, confg_file, sys.exc_value)) |
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[83eb5208] | 99 | except ValueError: |
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[b3e8629] | 100 | print("Value error") |
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[83eb5208] | 101 | pass |
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[f721030] | 102 | finally: |
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| 103 | if fObj is not None: |
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| 104 | fObj.close() |
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[31c5b58] | 105 | #logging.info("GuiManager loaded %s/%s" % (path, confg_file)) |
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[f721030] | 106 | return config_module |
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| 107 | |
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| 108 | |
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[3c8242c] | 109 | # Get APP folder |
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| 110 | PATH_APP = get_app_dir() |
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| 111 | DATAPATH = PATH_APP |
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[b0c5e8c] | 112 | |
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[3c8242c] | 113 | # Read in the local config, which can either be with the main |
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| 114 | # application or in the installation directory |
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| 115 | config = _find_local_config('local_config', PATH_APP) |
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| 116 | |
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| 117 | if config is None: |
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| 118 | config = _find_local_config('local_config', os.getcwd()) |
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| 119 | else: |
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| 120 | pass |
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[f721030] | 121 | |
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[3c8242c] | 122 | c_conf_dir = CustomDir.setup_conf_dir(PATH_APP) |
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[83eb5208] | 123 | |
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[3c8242c] | 124 | custom_config = _find_local_config('custom_config', c_conf_dir) |
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| 125 | if custom_config is None: |
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| 126 | custom_config = _find_local_config('custom_config', os.getcwd()) |
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[f721030] | 127 | if custom_config is None: |
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[3c8242c] | 128 | msgConfig = "Custom_config file was not imported" |
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| 129 | |
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| 130 | #read some constants from config |
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| 131 | APPLICATION_STATE_EXTENSION = config.APPLICATION_STATE_EXTENSION |
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| 132 | APPLICATION_NAME = config.__appname__ |
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| 133 | SPLASH_SCREEN_PATH = config.SPLASH_SCREEN_PATH |
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| 134 | WELCOME_PANEL_ON = config.WELCOME_PANEL_ON |
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| 135 | SPLASH_SCREEN_WIDTH = config.SPLASH_SCREEN_WIDTH |
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| 136 | SPLASH_SCREEN_HEIGHT = config.SPLASH_SCREEN_HEIGHT |
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| 137 | SS_MAX_DISPLAY_TIME = config.SS_MAX_DISPLAY_TIME |
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| 138 | if not WELCOME_PANEL_ON: |
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| 139 | WELCOME_PANEL_SHOW = False |
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| 140 | else: |
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| 141 | WELCOME_PANEL_SHOW = True |
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| 142 | try: |
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| 143 | DATALOADER_SHOW = custom_config.DATALOADER_SHOW |
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| 144 | TOOLBAR_SHOW = custom_config.TOOLBAR_SHOW |
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| 145 | FIXED_PANEL = custom_config.FIXED_PANEL |
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| 146 | if WELCOME_PANEL_ON: |
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| 147 | WELCOME_PANEL_SHOW = custom_config.WELCOME_PANEL_SHOW |
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| 148 | PLOPANEL_WIDTH = custom_config.PLOPANEL_WIDTH |
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| 149 | DATAPANEL_WIDTH = custom_config.DATAPANEL_WIDTH |
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| 150 | GUIFRAME_WIDTH = custom_config.GUIFRAME_WIDTH |
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| 151 | GUIFRAME_HEIGHT = custom_config.GUIFRAME_HEIGHT |
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| 152 | CONTROL_WIDTH = custom_config.CONTROL_WIDTH |
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| 153 | CONTROL_HEIGHT = custom_config.CONTROL_HEIGHT |
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| 154 | DEFAULT_PERSPECTIVE = custom_config.DEFAULT_PERSPECTIVE |
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| 155 | CLEANUP_PLOT = custom_config.CLEANUP_PLOT |
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| 156 | # custom open_path |
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| 157 | open_folder = custom_config.DEFAULT_OPEN_FOLDER |
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[f0bb711] | 158 | if open_folder is not None and os.path.isdir(open_folder): |
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[3c8242c] | 159 | DEFAULT_OPEN_FOLDER = os.path.abspath(open_folder) |
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[f721030] | 160 | else: |
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| 161 | DEFAULT_OPEN_FOLDER = PATH_APP |
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[3c8242c] | 162 | except AttributeError: |
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| 163 | DATALOADER_SHOW = True |
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| 164 | TOOLBAR_SHOW = True |
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| 165 | FIXED_PANEL = True |
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| 166 | WELCOME_PANEL_SHOW = False |
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| 167 | PLOPANEL_WIDTH = config.PLOPANEL_WIDTH |
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| 168 | DATAPANEL_WIDTH = config.DATAPANEL_WIDTH |
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| 169 | GUIFRAME_WIDTH = config.GUIFRAME_WIDTH |
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| 170 | GUIFRAME_HEIGHT = config.GUIFRAME_HEIGHT |
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| 171 | CONTROL_WIDTH = -1 |
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| 172 | CONTROL_HEIGHT = -1 |
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| 173 | DEFAULT_PERSPECTIVE = None |
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| 174 | CLEANUP_PLOT = False |
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| 175 | DEFAULT_OPEN_FOLDER = PATH_APP |
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| 176 | |
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| 177 | #DEFAULT_STYLE = config.DEFAULT_STYLE |
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| 178 | |
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| 179 | PLUGIN_STATE_EXTENSIONS = config.PLUGIN_STATE_EXTENSIONS |
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| 180 | OPEN_SAVE_MENU = config.OPEN_SAVE_PROJECT_MENU |
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| 181 | VIEW_MENU = config.VIEW_MENU |
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| 182 | EDIT_MENU = config.EDIT_MENU |
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| 183 | extension_list = [] |
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| 184 | if APPLICATION_STATE_EXTENSION is not None: |
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| 185 | extension_list.append(APPLICATION_STATE_EXTENSION) |
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| 186 | EXTENSIONS = PLUGIN_STATE_EXTENSIONS + extension_list |
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| 187 | try: |
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| 188 | PLUGINS_WLIST = '|'.join(config.PLUGINS_WLIST) |
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| 189 | except AttributeError: |
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| 190 | PLUGINS_WLIST = '' |
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| 191 | APPLICATION_WLIST = config.APPLICATION_WLIST |
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| 192 | IS_WIN = True |
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| 193 | IS_LINUX = False |
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| 194 | CLOSE_SHOW = True |
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| 195 | TIME_FACTOR = 2 |
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| 196 | NOT_SO_GRAPH_LIST = ["BoxSum"] |
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[fef38e8] | 197 | |
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[f721030] | 198 | |
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| 199 | class Communicate(QtCore.QObject): |
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| 200 | """ |
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| 201 | Utility class for tracking of the Qt signals |
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| 202 | """ |
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| 203 | # File got successfully read |
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| 204 | fileReadSignal = QtCore.pyqtSignal(list) |
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| 205 | |
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| 206 | # Open File returns "list" of paths |
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| 207 | fileDataReceivedSignal = QtCore.pyqtSignal(dict) |
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| 208 | |
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| 209 | # Update Main window status bar with "str" |
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[f82ab8c] | 210 | # Old "StatusEvent" |
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[f721030] | 211 | statusBarUpdateSignal = QtCore.pyqtSignal(str) |
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| 212 | |
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| 213 | # Send data to the current perspective |
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| 214 | updatePerspectiveWithDataSignal = QtCore.pyqtSignal(list) |
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[5032ea68] | 215 | |
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| 216 | # New data in current perspective |
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[a281ab8] | 217 | updateModelFromPerspectiveSignal = QtCore.pyqtSignal(QtGui.QStandardItem) |
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| 218 | |
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[5236449] | 219 | # New theory data in current perspective |
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| 220 | updateTheoryFromPerspectiveSignal = QtCore.pyqtSignal(QtGui.QStandardItem) |
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| 221 | |
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[fd7ef36] | 222 | # Request to delete plots (in the theory view) related to a given model ID |
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| 223 | deleteIntermediateTheoryPlotsSignal = QtCore.pyqtSignal(str) |
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| 224 | |
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[f82ab8c] | 225 | # New plot requested from the GUI manager |
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| 226 | # Old "NewPlotEvent" |
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[5b144c6] | 227 | plotRequestedSignal = QtCore.pyqtSignal(list, int) |
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[f82ab8c] | 228 | |
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[3b3b40b] | 229 | # Plot from file names |
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| 230 | plotFromFilenameSignal = QtCore.pyqtSignal(str) |
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| 231 | |
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[7d077d1] | 232 | # Plot update requested from a perspective |
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| 233 | plotUpdateSignal = QtCore.pyqtSignal(list) |
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| 234 | |
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[e540cd2] | 235 | # Progress bar update value |
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| 236 | progressBarUpdateSignal = QtCore.pyqtSignal(int) |
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| 237 | |
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[8cb6cd6] | 238 | # Workspace charts added/removed |
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| 239 | activeGraphsSignal = QtCore.pyqtSignal(list) |
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| 240 | |
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[27313b7] | 241 | # Current workspace chart's name changed |
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| 242 | activeGraphName = QtCore.pyqtSignal(tuple) |
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| 243 | |
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[83d6249] | 244 | # Current perspective changed |
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| 245 | perspectiveChangedSignal = QtCore.pyqtSignal(str) |
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| 246 | |
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[38eb433] | 247 | # File/dataset got deleted |
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| 248 | dataDeletedSignal = QtCore.pyqtSignal(list) |
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| 249 | |
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[d5c5d3d] | 250 | # Send data to Data Operation Utility panel |
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[f0bb711] | 251 | sendDataToPanelSignal = QtCore.pyqtSignal(dict) |
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[d5c5d3d] | 252 | |
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| 253 | # Send result of Data Operation Utility panel to Data Explorer |
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| 254 | updateModelFromDataOperationPanelSignal = QtCore.pyqtSignal(QtGui.QStandardItem, dict) |
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[f82ab8c] | 255 | |
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[3b3b40b] | 256 | # Notify about a new custom plugin being written/deleted/modified |
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| 257 | customModelDirectoryChanged = QtCore.pyqtSignal() |
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| 258 | |
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[d4dac80] | 259 | # Notify the gui manager about new data to be added to the grid view |
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| 260 | sendDataToGridSignal = QtCore.pyqtSignal(list) |
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| 261 | |
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[57be490] | 262 | # Action Save Analysis triggered |
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| 263 | saveAnalysisSignal = QtCore.pyqtSignal() |
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[d4dac80] | 264 | |
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[e20870bc] | 265 | # Mask Editor requested |
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| 266 | maskEditorSignal = QtCore.pyqtSignal(Data2D) |
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| 267 | |
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[339e22b] | 268 | #second Mask Editor for external |
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| 269 | extMaskEditorSignal = QtCore.pyqtSignal() |
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| 270 | |
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[8e2cd79] | 271 | # Fitting parameter copy to clipboard |
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| 272 | copyFitParamsSignal = QtCore.pyqtSignal(str) |
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| 273 | |
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| 274 | # Fitting parameter paste from clipboard |
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| 275 | pasteFitParamsSignal = QtCore.pyqtSignal() |
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[0eff615] | 276 | |
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[3d18691] | 277 | # Notify about new categories/models from category manager |
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| 278 | updateModelCategoriesSignal = QtCore.pyqtSignal() |
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[8e2cd79] | 279 | |
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[5d28d6b] | 280 | # Tell the data explorer to switch tabs |
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| 281 | changeDataExplorerTabSignal = QtCore.pyqtSignal(int) |
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| 282 | |
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[8548d739] | 283 | def updateModelItemWithPlot(item, update_data, name=""): |
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[a281ab8] | 284 | """ |
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[1042dba] | 285 | Adds a checkboxed row named "name" to QStandardItem |
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[cee5c78] | 286 | Adds 'update_data' to that row. |
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[a281ab8] | 287 | """ |
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[e540cd2] | 288 | assert isinstance(item, QtGui.QStandardItem) |
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[3bdbfcc] | 289 | |
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| 290 | # Check if data with the same ID is already present |
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| 291 | for index in range(item.rowCount()): |
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| 292 | plot_item = item.child(index) |
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[5b144c6] | 293 | if not plot_item.isCheckable(): |
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| 294 | continue |
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| 295 | plot_data = plot_item.child(0).data() |
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| 296 | if plot_data.id is not None and \ |
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| 297 | plot_data.name == update_data.name: |
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| 298 | #(plot_data.name == update_data.name or plot_data.id == update_data.id): |
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[6cb305a] | 299 | # if plot_data.id is not None and plot_data.id == update_data.id: |
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[5b144c6] | 300 | # replace data section in item |
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| 301 | plot_item.child(0).setData(update_data) |
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| 302 | plot_item.setText(name) |
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| 303 | # Plot title if any |
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| 304 | if plot_item.child(1).hasChildren(): |
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| 305 | plot_item.child(1).child(0).setText("Title: %s"%name) |
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| 306 | # Force redisplay |
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| 307 | return |
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[a281ab8] | 308 | |
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[5236449] | 309 | # Create the new item |
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| 310 | checkbox_item = createModelItemWithPlot(update_data, name) |
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| 311 | |
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| 312 | # Append the new row to the main item |
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| 313 | item.appendRow(checkbox_item) |
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| 314 | |
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[0fe7e5b] | 315 | def deleteRedundantPlots(item, new_plots): |
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| 316 | """ |
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| 317 | Checks all plots that are children of the given item; if any have an ID or name not included in new_plots, |
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| 318 | it is deleted. Useful for e.g. switching from P(Q)S(Q) to P(Q); this would remove the old S(Q) plot. |
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| 319 | |
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| 320 | Ensure that new_plots contains ALL the relevant plots(!!!) |
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| 321 | """ |
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| 322 | assert isinstance(item, QtGui.QStandardItem) |
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| 323 | |
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| 324 | names = [p.name for p in new_plots if p.name is not None] |
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| 325 | ids = [p.id for p in new_plots if p.id is not None] |
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| 326 | |
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| 327 | items_to_delete = [] |
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| 328 | |
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| 329 | for index in range(item.rowCount()): |
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| 330 | plot_item = item.child(index) |
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| 331 | if plot_item.isCheckable(): |
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| 332 | plot_data = plot_item.child(0).data() |
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| 333 | if (plot_data.id is not None) and (plot_data.id not in ids) and (plot_data.name not in names): |
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| 334 | items_to_delete.append(plot_item) |
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| 335 | |
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| 336 | for plot_item in items_to_delete: |
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| 337 | item.removeRow(plot_item.row()) |
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| 338 | |
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[6a3e1fe] | 339 | class HashableStandardItem(QtGui.QStandardItem): |
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| 340 | """ |
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| 341 | Subclassed standard item with reimplemented __hash__ |
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| 342 | to allow for use as an index. |
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| 343 | """ |
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| 344 | def __init__(self, parent=None): |
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[0261bc1] | 345 | super(HashableStandardItem, self).__init__() |
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[6a3e1fe] | 346 | |
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| 347 | def __hash__(self): |
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| 348 | ''' just a random hash value ''' |
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| 349 | #return hash(self.__init__) |
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| 350 | return 0 |
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| 351 | |
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[0261bc1] | 352 | def clone(self): |
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| 353 | ''' Assure __hash__ is cloned as well''' |
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| 354 | clone = super(HashableStandardItem, self).clone() |
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| 355 | clone.__hash__ = self.__hash__ |
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| 356 | return clone |
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| 357 | |
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[3933ee9] | 358 | def getMonospaceFont(): |
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| 359 | """Convenience function; returns a monospace font to be used in any shells, code editors, etc.""" |
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| 360 | |
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| 361 | # Note: Consolas is only available on Windows; the style hint is used on other operating systems |
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| 362 | font = QtGui.QFont("Consolas", 10) |
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| 363 | font.setStyleHint(QtGui.QFont.Monospace, QtGui.QFont.PreferQuality) |
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| 364 | return font |
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| 365 | |
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[5236449] | 366 | def createModelItemWithPlot(update_data, name=""): |
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| 367 | """ |
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| 368 | Creates a checkboxed QStandardItem named "name" |
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[cee5c78] | 369 | Adds 'update_data' to that row. |
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[5236449] | 370 | """ |
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[b3e8629] | 371 | py_update_data = update_data |
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[5236449] | 372 | |
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[6a3e1fe] | 373 | checkbox_item = HashableStandardItem() |
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[a281ab8] | 374 | checkbox_item.setCheckable(True) |
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| 375 | checkbox_item.setCheckState(QtCore.Qt.Checked) |
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| 376 | checkbox_item.setText(name) |
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| 377 | |
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| 378 | # Add "Info" item |
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[5236449] | 379 | if isinstance(py_update_data, (Data1D, Data2D)): |
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[1042dba] | 380 | # If Data1/2D added - extract Info from it |
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| 381 | info_item = infoFromData(py_update_data) |
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| 382 | else: |
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| 383 | # otherwise just add a naked item |
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[481ff26] | 384 | info_item = QtGui.QStandardItem("Info") |
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[a281ab8] | 385 | |
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| 386 | # Add the actual Data1D/Data2D object |
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| 387 | object_item = QtGui.QStandardItem() |
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| 388 | object_item.setData(update_data) |
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| 389 | |
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[1042dba] | 390 | # Set the data object as the first child |
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[a281ab8] | 391 | checkbox_item.setChild(0, object_item) |
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| 392 | |
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[1042dba] | 393 | # Set info_item as the second child |
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[a281ab8] | 394 | checkbox_item.setChild(1, info_item) |
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| 395 | |
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[5236449] | 396 | # And return the newly created item |
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| 397 | return checkbox_item |
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[1042dba] | 398 | |
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[8548d739] | 399 | def updateModelItem(item, update_data, name=""): |
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| 400 | """ |
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| 401 | Adds a simple named child to QStandardItem |
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| 402 | """ |
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| 403 | assert isinstance(item, QtGui.QStandardItem) |
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| 404 | |
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| 405 | # Add the actual Data1D/Data2D object |
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| 406 | object_item = QtGui.QStandardItem() |
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| 407 | object_item.setText(name) |
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[b3e8629] | 408 | object_item.setData(update_data) |
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[8548d739] | 409 | |
---|
| 410 | # Append the new row to the main item |
---|
| 411 | item.appendRow(object_item) |
---|
| 412 | |
---|
[f1f3e6a] | 413 | def updateModelItemStatus(model_item, filename="", name="", status=2): |
---|
| 414 | """ |
---|
| 415 | Update status of checkbox related to high- and low-Q extrapolation |
---|
| 416 | choice in Invariant Panel |
---|
| 417 | """ |
---|
| 418 | assert isinstance(model_item, QtGui.QStandardItemModel) |
---|
| 419 | |
---|
| 420 | # Iterate over model looking for items with checkboxes |
---|
| 421 | for index in range(model_item.rowCount()): |
---|
| 422 | item = model_item.item(index) |
---|
[6cb305a] | 423 | if item.text() == filename and item.isCheckable() \ |
---|
| 424 | and item.checkState() == QtCore.Qt.Checked: |
---|
[f1f3e6a] | 425 | # Going 1 level deeper only |
---|
| 426 | for index_2 in range(item.rowCount()): |
---|
| 427 | item_2 = item.child(index_2) |
---|
| 428 | if item_2 and item_2.isCheckable() and item_2.text() == name: |
---|
| 429 | item_2.setCheckState(status) |
---|
| 430 | |
---|
| 431 | return |
---|
| 432 | |
---|
[88e1f57] | 433 | def itemFromFilename(filename, model_item): |
---|
| 434 | """ |
---|
| 435 | Returns the model item text=filename in the model |
---|
| 436 | """ |
---|
| 437 | assert isinstance(model_item, QtGui.QStandardItemModel) |
---|
[b3e8629] | 438 | assert isinstance(filename, str) |
---|
[88e1f57] | 439 | |
---|
| 440 | # Iterate over model looking for named items |
---|
[6cb305a] | 441 | item = list([i for i in [model_item.item(index) |
---|
| 442 | for index in range(model_item.rowCount())] |
---|
| 443 | if str(i.text()) == filename]) |
---|
[88e1f57] | 444 | return item[0] if len(item)>0 else None |
---|
| 445 | |
---|
[57be490] | 446 | def plotsFromModel(model_name, model_item): |
---|
| 447 | """ |
---|
| 448 | Returns the list of plots for the item with model name in the model |
---|
| 449 | """ |
---|
| 450 | assert isinstance(model_item, QtGui.QStandardItem) |
---|
| 451 | assert isinstance(model_name, str) |
---|
| 452 | |
---|
| 453 | plot_data = [] |
---|
| 454 | # Iterate over model looking for named items |
---|
| 455 | for index in range(model_item.rowCount()): |
---|
| 456 | item = model_item.child(index) |
---|
| 457 | if isinstance(item.data(), (Data1D, Data2D)): |
---|
| 458 | plot_data.append(item.data()) |
---|
| 459 | if model_name in str(item.text()): |
---|
| 460 | #plot_data.append(item.child(0).data()) |
---|
| 461 | # Going 1 level deeper only |
---|
| 462 | for index_2 in range(item.rowCount()): |
---|
| 463 | item_2 = item.child(index_2) |
---|
| 464 | if item_2 and isinstance(item_2.data(), (Data1D, Data2D)): |
---|
| 465 | plot_data.append(item_2.data()) |
---|
| 466 | |
---|
| 467 | return plot_data |
---|
| 468 | |
---|
[d48cc19] | 469 | def plotsFromFilename(filename, model_item): |
---|
| 470 | """ |
---|
| 471 | Returns the list of plots for the item with text=filename in the model |
---|
| 472 | """ |
---|
| 473 | assert isinstance(model_item, QtGui.QStandardItemModel) |
---|
[b3e8629] | 474 | assert isinstance(filename, str) |
---|
[d48cc19] | 475 | |
---|
[6ff103a] | 476 | plot_data = {} |
---|
[d48cc19] | 477 | # Iterate over model looking for named items |
---|
| 478 | for index in range(model_item.rowCount()): |
---|
| 479 | item = model_item.item(index) |
---|
[685e0e3] | 480 | if filename in str(item.text()): |
---|
[d48cc19] | 481 | # TODO: assure item type is correct (either data1/2D or Plotter) |
---|
[6ff103a] | 482 | plot_data[item] = item.child(0).data() |
---|
[56b22f9] | 483 | # Going 1 level deeper only |
---|
| 484 | for index_2 in range(item.rowCount()): |
---|
| 485 | item_2 = item.child(index_2) |
---|
| 486 | if item_2 and item_2.isCheckable(): |
---|
| 487 | # TODO: assure item type is correct (either data1/2D or Plotter) |
---|
[6ff103a] | 488 | plot_data[item_2] = item_2.child(0).data() |
---|
[d48cc19] | 489 | |
---|
| 490 | return plot_data |
---|
[8548d739] | 491 | |
---|
[1042dba] | 492 | def plotsFromCheckedItems(model_item): |
---|
| 493 | """ |
---|
| 494 | Returns the list of plots for items in the model which are checked |
---|
| 495 | """ |
---|
[e540cd2] | 496 | assert isinstance(model_item, QtGui.QStandardItemModel) |
---|
[1042dba] | 497 | |
---|
| 498 | plot_data = [] |
---|
| 499 | # Iterate over model looking for items with checkboxes |
---|
[9e426c1] | 500 | for index in range(model_item.rowCount()): |
---|
| 501 | item = model_item.item(index) |
---|
[6cb305a] | 502 | |
---|
[9e426c1] | 503 | # Going 1 level deeper only |
---|
| 504 | for index_2 in range(item.rowCount()): |
---|
| 505 | item_2 = item.child(index_2) |
---|
| 506 | if item_2 and item_2.isCheckable() and item_2.checkState() == QtCore.Qt.Checked: |
---|
| 507 | # TODO: assure item type is correct (either data1/2D or Plotter) |
---|
[fbfc488] | 508 | plot_data.append((item_2, item_2.child(0).data())) |
---|
[481ff26] | 509 | |
---|
[6cb305a] | 510 | if item.isCheckable() and item.checkState() == QtCore.Qt.Checked: |
---|
| 511 | # TODO: assure item type is correct (either data1/2D or Plotter) |
---|
| 512 | plot_data.append((item, item.child(0).data())) |
---|
| 513 | |
---|
[9e426c1] | 514 | return plot_data |
---|
| 515 | |
---|
| 516 | def infoFromData(data): |
---|
| 517 | """ |
---|
| 518 | Given Data1D/Data2D object, extract relevant Info elements |
---|
| 519 | and add them to a model item |
---|
| 520 | """ |
---|
[e540cd2] | 521 | assert isinstance(data, (Data1D, Data2D)) |
---|
[9e426c1] | 522 | |
---|
[1042dba] | 523 | info_item = QtGui.QStandardItem("Info") |
---|
[9e426c1] | 524 | |
---|
[481ff26] | 525 | title_item = QtGui.QStandardItem("Title: " + data.title) |
---|
[1042dba] | 526 | info_item.appendRow(title_item) |
---|
[481ff26] | 527 | run_item = QtGui.QStandardItem("Run: " + str(data.run)) |
---|
[1042dba] | 528 | info_item.appendRow(run_item) |
---|
[481ff26] | 529 | type_item = QtGui.QStandardItem("Type: " + str(data.__class__.__name__)) |
---|
[1042dba] | 530 | info_item.appendRow(type_item) |
---|
| 531 | |
---|
| 532 | if data.path: |
---|
[481ff26] | 533 | path_item = QtGui.QStandardItem("Path: " + data.path) |
---|
[1042dba] | 534 | info_item.appendRow(path_item) |
---|
| 535 | |
---|
| 536 | if data.instrument: |
---|
[481ff26] | 537 | instr_item = QtGui.QStandardItem("Instrument: " + data.instrument) |
---|
[1042dba] | 538 | info_item.appendRow(instr_item) |
---|
| 539 | |
---|
| 540 | process_item = QtGui.QStandardItem("Process") |
---|
| 541 | if isinstance(data.process, list) and data.process: |
---|
| 542 | for process in data.process: |
---|
| 543 | process_date = process.date |
---|
| 544 | process_date_item = QtGui.QStandardItem("Date: " + process_date) |
---|
| 545 | process_item.appendRow(process_date_item) |
---|
| 546 | |
---|
| 547 | process_descr = process.description |
---|
| 548 | process_descr_item = QtGui.QStandardItem("Description: " + process_descr) |
---|
| 549 | process_item.appendRow(process_descr_item) |
---|
| 550 | |
---|
| 551 | process_name = process.name |
---|
| 552 | process_name_item = QtGui.QStandardItem("Name: " + process_name) |
---|
| 553 | process_item.appendRow(process_name_item) |
---|
| 554 | |
---|
| 555 | info_item.appendRow(process_item) |
---|
[9e426c1] | 556 | |
---|
| 557 | return info_item |
---|
| 558 | |
---|
[d4dac80] | 559 | def dataFromItem(item): |
---|
| 560 | """ |
---|
| 561 | Retrieve Data1D/2D component from QStandardItem. |
---|
| 562 | The assumption - data stored in SasView standard, in child 0 |
---|
| 563 | """ |
---|
| 564 | return item.child(0).data() |
---|
| 565 | |
---|
[f82ab8c] | 566 | def openLink(url): |
---|
| 567 | """ |
---|
| 568 | Open a URL in an external browser. |
---|
| 569 | Check the URL first, though. |
---|
| 570 | """ |
---|
[b3e8629] | 571 | parsed_url = urllib.parse.urlparse(url) |
---|
[f82ab8c] | 572 | if parsed_url.scheme: |
---|
| 573 | webbrowser.open(url) |
---|
| 574 | else: |
---|
| 575 | msg = "Attempt at opening an invalid URL" |
---|
[b3e8629] | 576 | raise AttributeError(msg) |
---|
[4b71e91] | 577 | |
---|
| 578 | def retrieveData1d(data): |
---|
| 579 | """ |
---|
| 580 | Retrieve 1D data from file and construct its text |
---|
| 581 | representation |
---|
| 582 | """ |
---|
[28a84e9] | 583 | if not isinstance(data, Data1D): |
---|
| 584 | msg = "Incorrect type passed to retrieveData1d" |
---|
[b3e8629] | 585 | raise AttributeError(msg) |
---|
[4b71e91] | 586 | try: |
---|
| 587 | xmin = min(data.x) |
---|
| 588 | ymin = min(data.y) |
---|
| 589 | except: |
---|
| 590 | msg = "Unable to find min/max of \n data named %s" % \ |
---|
| 591 | data.filename |
---|
[31c5b58] | 592 | #logging.error(msg) |
---|
[b3e8629] | 593 | raise ValueError(msg) |
---|
[4b71e91] | 594 | |
---|
| 595 | text = data.__str__() |
---|
| 596 | text += 'Data Min Max:\n' |
---|
| 597 | text += 'X_min = %s: X_max = %s\n' % (xmin, max(data.x)) |
---|
| 598 | text += 'Y_min = %s: Y_max = %s\n' % (ymin, max(data.y)) |
---|
[d5c5d3d] | 599 | if data.dy is not None: |
---|
[4b71e91] | 600 | text += 'dY_min = %s: dY_max = %s\n' % (min(data.dy), max(data.dy)) |
---|
| 601 | text += '\nData Points:\n' |
---|
| 602 | x_st = "X" |
---|
| 603 | for index in range(len(data.x)): |
---|
[d5c5d3d] | 604 | if data.dy is not None and len(data.dy) > index: |
---|
[4b71e91] | 605 | dy_val = data.dy[index] |
---|
| 606 | else: |
---|
| 607 | dy_val = 0.0 |
---|
[d5c5d3d] | 608 | if data.dx is not None and len(data.dx) > index: |
---|
[4b71e91] | 609 | dx_val = data.dx[index] |
---|
| 610 | else: |
---|
| 611 | dx_val = 0.0 |
---|
[d5c5d3d] | 612 | if data.dxl is not None and len(data.dxl) > index: |
---|
[4b71e91] | 613 | if index == 0: |
---|
| 614 | x_st = "Xl" |
---|
| 615 | dx_val = data.dxl[index] |
---|
[d5c5d3d] | 616 | elif data.dxw is not None and len(data.dxw) > index: |
---|
[4b71e91] | 617 | if index == 0: |
---|
| 618 | x_st = "Xw" |
---|
| 619 | dx_val = data.dxw[index] |
---|
| 620 | |
---|
| 621 | if index == 0: |
---|
| 622 | text += "<index> \t<X> \t<Y> \t<dY> \t<d%s>\n" % x_st |
---|
| 623 | text += "%s \t%s \t%s \t%s \t%s\n" % (index, |
---|
| 624 | data.x[index], |
---|
| 625 | data.y[index], |
---|
| 626 | dy_val, |
---|
| 627 | dx_val) |
---|
| 628 | return text |
---|
| 629 | |
---|
| 630 | def retrieveData2d(data): |
---|
| 631 | """ |
---|
[39551a68] | 632 | Retrieve 2D data from file and construct its text |
---|
[4b71e91] | 633 | representation |
---|
| 634 | """ |
---|
[39551a68] | 635 | if not isinstance(data, Data2D): |
---|
| 636 | msg = "Incorrect type passed to retrieveData2d" |
---|
[b3e8629] | 637 | raise AttributeError(msg) |
---|
[39551a68] | 638 | |
---|
[4b71e91] | 639 | text = data.__str__() |
---|
| 640 | text += 'Data Min Max:\n' |
---|
| 641 | text += 'I_min = %s\n' % min(data.data) |
---|
| 642 | text += 'I_max = %s\n\n' % max(data.data) |
---|
| 643 | text += 'Data (First 2501) Points:\n' |
---|
| 644 | text += 'Data columns include err(I).\n' |
---|
| 645 | text += 'ASCII data starts here.\n' |
---|
| 646 | text += "<index> \t<Qx> \t<Qy> \t<I> \t<dI> \t<dQparal> \t<dQperp>\n" |
---|
| 647 | di_val = 0.0 |
---|
| 648 | dx_val = 0.0 |
---|
| 649 | dy_val = 0.0 |
---|
| 650 | len_data = len(data.qx_data) |
---|
[b3e8629] | 651 | for index in range(0, len_data): |
---|
[4b71e91] | 652 | x_val = data.qx_data[index] |
---|
| 653 | y_val = data.qy_data[index] |
---|
| 654 | i_val = data.data[index] |
---|
[d5c5d3d] | 655 | if data.err_data is not None: |
---|
[4b71e91] | 656 | di_val = data.err_data[index] |
---|
[d5c5d3d] | 657 | if data.dqx_data is not None: |
---|
[4b71e91] | 658 | dx_val = data.dqx_data[index] |
---|
[d5c5d3d] | 659 | if data.dqy_data is not None: |
---|
[4b71e91] | 660 | dy_val = data.dqy_data[index] |
---|
| 661 | |
---|
| 662 | text += "%s \t%s \t%s \t%s \t%s \t%s \t%s\n" % (index, |
---|
| 663 | x_val, |
---|
| 664 | y_val, |
---|
| 665 | i_val, |
---|
| 666 | di_val, |
---|
| 667 | dx_val, |
---|
| 668 | dy_val) |
---|
| 669 | # Takes too long time for typical data2d: Break here |
---|
| 670 | if index >= 2500: |
---|
| 671 | text += ".............\n" |
---|
| 672 | break |
---|
| 673 | |
---|
| 674 | return text |
---|
[28a84e9] | 675 | |
---|
[39551a68] | 676 | def onTXTSave(data, path): |
---|
[28a84e9] | 677 | """ |
---|
| 678 | Save file as formatted txt |
---|
| 679 | """ |
---|
| 680 | with open(path,'w') as out: |
---|
| 681 | has_errors = True |
---|
[0261bc1] | 682 | if data.dy is None or not data.dy.any(): |
---|
[28a84e9] | 683 | has_errors = False |
---|
| 684 | # Sanity check |
---|
| 685 | if has_errors: |
---|
| 686 | try: |
---|
| 687 | if len(data.y) != len(data.dy): |
---|
| 688 | has_errors = False |
---|
| 689 | except: |
---|
| 690 | has_errors = False |
---|
| 691 | if has_errors: |
---|
[0261bc1] | 692 | if data.dx is not None and data.dx.any(): |
---|
[28a84e9] | 693 | out.write("<X> <Y> <dY> <dX>\n") |
---|
| 694 | else: |
---|
| 695 | out.write("<X> <Y> <dY>\n") |
---|
| 696 | else: |
---|
| 697 | out.write("<X> <Y>\n") |
---|
| 698 | |
---|
| 699 | for i in range(len(data.x)): |
---|
| 700 | if has_errors: |
---|
[0261bc1] | 701 | if data.dx is not None and data.dx.any(): |
---|
[cee5c78] | 702 | if data.dx[i] is not None: |
---|
[28a84e9] | 703 | out.write("%g %g %g %g\n" % (data.x[i], |
---|
| 704 | data.y[i], |
---|
| 705 | data.dy[i], |
---|
| 706 | data.dx[i])) |
---|
| 707 | else: |
---|
| 708 | out.write("%g %g %g\n" % (data.x[i], |
---|
| 709 | data.y[i], |
---|
| 710 | data.dy[i])) |
---|
| 711 | else: |
---|
| 712 | out.write("%g %g %g\n" % (data.x[i], |
---|
| 713 | data.y[i], |
---|
| 714 | data.dy[i])) |
---|
| 715 | else: |
---|
| 716 | out.write("%g %g\n" % (data.x[i], |
---|
| 717 | data.y[i])) |
---|
| 718 | |
---|
| 719 | def saveData1D(data): |
---|
| 720 | """ |
---|
| 721 | Save 1D data points |
---|
| 722 | """ |
---|
| 723 | default_name = os.path.basename(data.filename) |
---|
| 724 | default_name, extension = os.path.splitext(default_name) |
---|
[e694f0f] | 725 | if not extension: |
---|
| 726 | extension = ".txt" |
---|
[28a84e9] | 727 | default_name += "_out" + extension |
---|
| 728 | |
---|
| 729 | wildcard = "Text files (*.txt);;"\ |
---|
| 730 | "CanSAS 1D files(*.xml)" |
---|
| 731 | kwargs = { |
---|
| 732 | 'caption' : 'Save As', |
---|
| 733 | 'directory' : default_name, |
---|
| 734 | 'filter' : wildcard, |
---|
| 735 | 'parent' : None, |
---|
| 736 | } |
---|
| 737 | # Query user for filename. |
---|
[d6b8a1d] | 738 | filename_tuple = QtWidgets.QFileDialog.getSaveFileName(**kwargs) |
---|
| 739 | filename = filename_tuple[0] |
---|
[28a84e9] | 740 | |
---|
| 741 | # User cancelled. |
---|
| 742 | if not filename: |
---|
| 743 | return |
---|
| 744 | |
---|
| 745 | #Instantiate a loader |
---|
| 746 | loader = Loader() |
---|
| 747 | if os.path.splitext(filename)[1].lower() == ".txt": |
---|
[39551a68] | 748 | onTXTSave(data, filename) |
---|
[28a84e9] | 749 | if os.path.splitext(filename)[1].lower() == ".xml": |
---|
| 750 | loader.save(filename, data, ".xml") |
---|
| 751 | |
---|
| 752 | def saveData2D(data): |
---|
| 753 | """ |
---|
| 754 | Save data2d dialog |
---|
| 755 | """ |
---|
| 756 | default_name = os.path.basename(data.filename) |
---|
| 757 | default_name, _ = os.path.splitext(default_name) |
---|
| 758 | ext_format = ".dat" |
---|
| 759 | default_name += "_out" + ext_format |
---|
| 760 | |
---|
| 761 | wildcard = "IGOR/DAT 2D file in Q_map (*.dat)" |
---|
| 762 | kwargs = { |
---|
| 763 | 'caption' : 'Save As', |
---|
| 764 | 'directory' : default_name, |
---|
| 765 | 'filter' : wildcard, |
---|
| 766 | 'parent' : None, |
---|
| 767 | } |
---|
| 768 | # Query user for filename. |
---|
[d6b8a1d] | 769 | filename_tuple = QtWidgets.QFileDialog.getSaveFileName(**kwargs) |
---|
| 770 | filename = filename_tuple[0] |
---|
[28a84e9] | 771 | |
---|
| 772 | # User cancelled. |
---|
| 773 | if not filename: |
---|
| 774 | return |
---|
[d6b8a1d] | 775 | |
---|
[28a84e9] | 776 | #Instantiate a loader |
---|
| 777 | loader = Loader() |
---|
| 778 | |
---|
| 779 | if os.path.splitext(filename)[1].lower() == ext_format: |
---|
| 780 | loader.save(filename, data, ext_format) |
---|
[e4676c8] | 781 | |
---|
| 782 | class FormulaValidator(QtGui.QValidator): |
---|
| 783 | def __init__(self, parent=None): |
---|
| 784 | super(FormulaValidator, self).__init__(parent) |
---|
| 785 | |
---|
| 786 | def validate(self, input, pos): |
---|
| 787 | |
---|
[fbfc488] | 788 | self._setStyleSheet("") |
---|
| 789 | return QtGui.QValidator.Acceptable, pos |
---|
| 790 | |
---|
| 791 | #try: |
---|
| 792 | # Formula(str(input)) |
---|
| 793 | # self._setStyleSheet("") |
---|
| 794 | # return QtGui.QValidator.Acceptable, pos |
---|
| 795 | |
---|
| 796 | #except Exception as e: |
---|
| 797 | # self._setStyleSheet("background-color:pink;") |
---|
| 798 | # return QtGui.QValidator.Intermediate, pos |
---|
[e4676c8] | 799 | |
---|
| 800 | def _setStyleSheet(self, value): |
---|
| 801 | try: |
---|
| 802 | if self.parent(): |
---|
| 803 | self.parent().setStyleSheet(value) |
---|
| 804 | except: |
---|
| 805 | pass |
---|
[8548d739] | 806 | |
---|
[aadf0af1] | 807 | def xyTransform(data, xLabel="", yLabel=""): |
---|
| 808 | """ |
---|
| 809 | Transforms x and y in View and set the scale |
---|
| 810 | """ |
---|
| 811 | # Changing the scale might be incompatible with |
---|
| 812 | # currently displayed data (for instance, going |
---|
| 813 | # from ln to log when all plotted values have |
---|
| 814 | # negative natural logs). |
---|
| 815 | # Go linear and only change the scale at the end. |
---|
| 816 | xscale = 'linear' |
---|
| 817 | yscale = 'linear' |
---|
| 818 | # Local data is either 1D or 2D |
---|
| 819 | if data.id == 'fit': |
---|
| 820 | return |
---|
| 821 | |
---|
[bb57068] | 822 | # make sure we have some function to operate on |
---|
| 823 | if xLabel is None: |
---|
| 824 | xLabel = 'log10(x)' |
---|
| 825 | if yLabel is None: |
---|
| 826 | yLabel = 'log10(y)' |
---|
| 827 | |
---|
[aadf0af1] | 828 | # control axis labels from the panel itself |
---|
| 829 | yname, yunits = data.get_yaxis() |
---|
| 830 | xname, xunits = data.get_xaxis() |
---|
| 831 | |
---|
| 832 | # Goes through all possible scales |
---|
| 833 | # self.x_label is already wrapped with Latex "$", so using the argument |
---|
| 834 | |
---|
| 835 | # X |
---|
| 836 | if xLabel == "x": |
---|
[dc5ef15] | 837 | data.transformX(DataTransform.toX, DataTransform.errToX) |
---|
[aadf0af1] | 838 | xLabel = "%s(%s)" % (xname, xunits) |
---|
| 839 | if xLabel == "x^(2)": |
---|
[dc5ef15] | 840 | data.transformX(DataTransform.toX2, DataTransform.errToX2) |
---|
| 841 | xunits = convertUnit(2, xunits) |
---|
[aadf0af1] | 842 | xLabel = "%s^{2}(%s)" % (xname, xunits) |
---|
| 843 | if xLabel == "x^(4)": |
---|
[dc5ef15] | 844 | data.transformX(DataTransform.toX4, DataTransform.errToX4) |
---|
| 845 | xunits = convertUnit(4, xunits) |
---|
[aadf0af1] | 846 | xLabel = "%s^{4}(%s)" % (xname, xunits) |
---|
| 847 | if xLabel == "ln(x)": |
---|
[dc5ef15] | 848 | data.transformX(DataTransform.toLogX, DataTransform.errToLogX) |
---|
[aadf0af1] | 849 | xLabel = "\ln{(%s)}(%s)" % (xname, xunits) |
---|
| 850 | if xLabel == "log10(x)": |
---|
[dc5ef15] | 851 | data.transformX(DataTransform.toX_pos, DataTransform.errToX_pos) |
---|
[aadf0af1] | 852 | xscale = 'log' |
---|
| 853 | xLabel = "%s(%s)" % (xname, xunits) |
---|
| 854 | if xLabel == "log10(x^(4))": |
---|
[dc5ef15] | 855 | data.transformX(DataTransform.toX4, DataTransform.errToX4) |
---|
| 856 | xunits = convertUnit(4, xunits) |
---|
[aadf0af1] | 857 | xLabel = "%s^{4}(%s)" % (xname, xunits) |
---|
| 858 | xscale = 'log' |
---|
| 859 | |
---|
| 860 | # Y |
---|
| 861 | if yLabel == "ln(y)": |
---|
[dc5ef15] | 862 | data.transformY(DataTransform.toLogX, DataTransform.errToLogX) |
---|
[aadf0af1] | 863 | yLabel = "\ln{(%s)}(%s)" % (yname, yunits) |
---|
| 864 | if yLabel == "y": |
---|
[dc5ef15] | 865 | data.transformY(DataTransform.toX, DataTransform.errToX) |
---|
[aadf0af1] | 866 | yLabel = "%s(%s)" % (yname, yunits) |
---|
| 867 | if yLabel == "log10(y)": |
---|
[dc5ef15] | 868 | data.transformY(DataTransform.toX_pos, DataTransform.errToX_pos) |
---|
[aadf0af1] | 869 | yscale = 'log' |
---|
| 870 | yLabel = "%s(%s)" % (yname, yunits) |
---|
| 871 | if yLabel == "y^(2)": |
---|
[dc5ef15] | 872 | data.transformY(DataTransform.toX2, DataTransform.errToX2) |
---|
| 873 | yunits = convertUnit(2, yunits) |
---|
[aadf0af1] | 874 | yLabel = "%s^{2}(%s)" % (yname, yunits) |
---|
| 875 | if yLabel == "1/y": |
---|
[dc5ef15] | 876 | data.transformY(DataTransform.toOneOverX, DataTransform.errOneOverX) |
---|
| 877 | yunits = convertUnit(-1, yunits) |
---|
[aadf0af1] | 878 | yLabel = "1/%s(%s)" % (yname, yunits) |
---|
| 879 | if yLabel == "y*x^(2)": |
---|
[dc5ef15] | 880 | data.transformY(DataTransform.toYX2, DataTransform.errToYX2) |
---|
| 881 | xunits = convertUnit(2, xunits) |
---|
[aadf0af1] | 882 | yLabel = "%s \ \ %s^{2}(%s%s)" % (yname, xname, yunits, xunits) |
---|
| 883 | if yLabel == "y*x^(4)": |
---|
[dc5ef15] | 884 | data.transformY(DataTransform.toYX4, DataTransform.errToYX4) |
---|
| 885 | xunits = convertUnit(4, xunits) |
---|
[aadf0af1] | 886 | yLabel = "%s \ \ %s^{4}(%s%s)" % (yname, xname, yunits, xunits) |
---|
| 887 | if yLabel == "1/sqrt(y)": |
---|
[dc5ef15] | 888 | data.transformY(DataTransform.toOneOverSqrtX, DataTransform.errOneOverSqrtX) |
---|
| 889 | yunits = convertUnit(-0.5, yunits) |
---|
[aadf0af1] | 890 | yLabel = "1/\sqrt{%s}(%s)" % (yname, yunits) |
---|
| 891 | if yLabel == "ln(y*x)": |
---|
[dc5ef15] | 892 | data.transformY(DataTransform.toLogXY, DataTransform.errToLogXY) |
---|
[aadf0af1] | 893 | yLabel = "\ln{(%s \ \ %s)}(%s%s)" % (yname, xname, yunits, xunits) |
---|
| 894 | if yLabel == "ln(y*x^(2))": |
---|
[dc5ef15] | 895 | data.transformY(DataTransform.toLogYX2, DataTransform.errToLogYX2) |
---|
| 896 | xunits = convertUnit(2, xunits) |
---|
[aadf0af1] | 897 | yLabel = "\ln (%s \ \ %s^{2})(%s%s)" % (yname, xname, yunits, xunits) |
---|
| 898 | if yLabel == "ln(y*x^(4))": |
---|
[dc5ef15] | 899 | data.transformY(DataTransform.toLogYX4, DataTransform.errToLogYX4) |
---|
| 900 | xunits = convertUnit(4, xunits) |
---|
[aadf0af1] | 901 | yLabel = "\ln (%s \ \ %s^{4})(%s%s)" % (yname, xname, yunits, xunits) |
---|
| 902 | if yLabel == "log10(y*x^(4))": |
---|
[dc5ef15] | 903 | data.transformY(DataTransform.toYX4, DataTransform.errToYX4) |
---|
| 904 | xunits = convertUnit(4, xunits) |
---|
[aadf0af1] | 905 | yscale = 'log' |
---|
| 906 | yLabel = "%s \ \ %s^{4}(%s%s)" % (yname, xname, yunits, xunits) |
---|
| 907 | |
---|
| 908 | # Perform the transformation of data in data1d->View |
---|
| 909 | data.transformView() |
---|
| 910 | |
---|
| 911 | return (xLabel, yLabel, xscale, yscale) |
---|
| 912 | |
---|
[570a58f9] | 913 | def formatNumber(value, high=False): |
---|
| 914 | """ |
---|
| 915 | Return a float in a standardized, human-readable formatted string. |
---|
| 916 | This is used to output readable (e.g. x.xxxe-y) values to the panel. |
---|
| 917 | """ |
---|
| 918 | try: |
---|
| 919 | value = float(value) |
---|
| 920 | except: |
---|
| 921 | output = "NaN" |
---|
| 922 | return output.lstrip().rstrip() |
---|
| 923 | |
---|
| 924 | if high: |
---|
[f7f5796] | 925 | output = "%-7.5g" % value |
---|
[570a58f9] | 926 | |
---|
| 927 | else: |
---|
| 928 | output = "%-5.3g" % value |
---|
| 929 | return output.lstrip().rstrip() |
---|
[ad6b4e2] | 930 | |
---|
[57be490] | 931 | def replaceHTMLwithUTF8(html): |
---|
| 932 | """ |
---|
| 933 | Replace some important HTML-encoded characters |
---|
| 934 | with their UTF-8 equivalents |
---|
| 935 | """ |
---|
| 936 | # Angstrom |
---|
| 937 | html_out = html.replace("Å", "Ã
") |
---|
| 938 | # infinity |
---|
| 939 | html_out = html_out.replace("∞", "â") |
---|
| 940 | # +/- |
---|
| 941 | html_out = html_out.replace("±", "±") |
---|
| 942 | |
---|
| 943 | return html_out |
---|
| 944 | |
---|
| 945 | def replaceHTMLwithASCII(html): |
---|
| 946 | """ |
---|
| 947 | Replace some important HTML-encoded characters |
---|
| 948 | with their ASCII equivalents |
---|
| 949 | """ |
---|
| 950 | # Angstrom |
---|
| 951 | html_out = html.replace("Å", "Ang") |
---|
| 952 | # infinity |
---|
| 953 | html_out = html_out.replace("∞", "inf") |
---|
| 954 | # +/- |
---|
| 955 | html_out = html_out.replace("±", "+/-") |
---|
| 956 | |
---|
| 957 | return html_out |
---|
| 958 | |
---|
| 959 | def convertUnitToUTF8(unit): |
---|
| 960 | """ |
---|
| 961 | Convert ASCII unit display into UTF-8 symbol |
---|
| 962 | """ |
---|
| 963 | if unit == "1/A": |
---|
| 964 | return "Ã
<sup>-1</sup>" |
---|
| 965 | elif unit == "1/cm": |
---|
| 966 | return "cm<sup>-1</sup>" |
---|
| 967 | elif unit == "Ang": |
---|
| 968 | return "Ã
" |
---|
| 969 | elif unit == "1e-6/Ang^2": |
---|
| 970 | return "10<sup>-6</sup>/Ã
<sup>2</sup>" |
---|
| 971 | elif unit == "inf": |
---|
| 972 | return "â" |
---|
| 973 | elif unit == "-inf": |
---|
| 974 | return "-â" |
---|
| 975 | else: |
---|
| 976 | return unit |
---|
| 977 | |
---|
[ad6b4e2] | 978 | def convertUnitToHTML(unit): |
---|
| 979 | """ |
---|
| 980 | Convert ASCII unit display into well rendering HTML |
---|
| 981 | """ |
---|
| 982 | if unit == "1/A": |
---|
| 983 | return "Å<sup>-1</sup>" |
---|
| 984 | elif unit == "1/cm": |
---|
| 985 | return "cm<sup>-1</sup>" |
---|
| 986 | elif unit == "Ang": |
---|
| 987 | return "Å" |
---|
| 988 | elif unit == "1e-6/Ang^2": |
---|
| 989 | return "10<sup>-6</sup>/Å<sup>2</sup>" |
---|
| 990 | elif unit == "inf": |
---|
| 991 | return "∞" |
---|
| 992 | elif unit == "-inf": |
---|
| 993 | return "-∞" |
---|
| 994 | else: |
---|
| 995 | return unit |
---|
[dc5ef15] | 996 | |
---|
| 997 | def parseName(name, expression): |
---|
| 998 | """ |
---|
| 999 | remove "_" in front of a name |
---|
| 1000 | """ |
---|
| 1001 | if re.match(expression, name) is not None: |
---|
| 1002 | word = re.split(expression, name, 1) |
---|
| 1003 | for item in word: |
---|
| 1004 | if item.lstrip().rstrip() != '': |
---|
| 1005 | return item |
---|
| 1006 | else: |
---|
| 1007 | return name |
---|
[fbfc488] | 1008 | |
---|
| 1009 | def toDouble(value_string): |
---|
| 1010 | """ |
---|
| 1011 | toFloat conversion which cares deeply about user's locale |
---|
| 1012 | """ |
---|
| 1013 | # Holy shit this escalated quickly in Qt5. |
---|
| 1014 | # No more float() cast on general locales. |
---|
| 1015 | value = QtCore.QLocale().toFloat(value_string) |
---|
| 1016 | if value[1]: |
---|
| 1017 | return value[0] |
---|
| 1018 | |
---|
| 1019 | # Try generic locale |
---|
| 1020 | value = QtCore.QLocale(QtCore.QLocale('en_US')).toFloat(value_string) |
---|
| 1021 | if value[1]: |
---|
| 1022 | return value[0] |
---|
| 1023 | else: |
---|
[0261bc1] | 1024 | raise TypeError |
---|
[d6b8a1d] | 1025 | |
---|
[3b3b40b] | 1026 | def findNextFilename(filename, directory): |
---|
| 1027 | """ |
---|
| 1028 | Finds the next available (non-existing) name for 'filename' in 'directory'. |
---|
| 1029 | plugin.py -> plugin (n).py - for first 'n' for which the file doesn't exist |
---|
| 1030 | """ |
---|
| 1031 | basename, ext = os.path.splitext(filename) |
---|
| 1032 | # limit the number of copies |
---|
| 1033 | MAX_FILENAMES = 1000 |
---|
| 1034 | # Start with (1) |
---|
| 1035 | number_ext = 1 |
---|
| 1036 | proposed_filename = "" |
---|
| 1037 | found_filename = False |
---|
| 1038 | # Find the next available filename or exit if too many copies |
---|
| 1039 | while not found_filename or number_ext > MAX_FILENAMES: |
---|
| 1040 | proposed_filename = basename + " ("+str(number_ext)+")" + ext |
---|
| 1041 | if os.path.exists(os.path.join(directory, proposed_filename)): |
---|
| 1042 | number_ext += 1 |
---|
| 1043 | else: |
---|
| 1044 | found_filename = True |
---|
| 1045 | |
---|
| 1046 | return proposed_filename |
---|
| 1047 | |
---|
| 1048 | |
---|
[d6b8a1d] | 1049 | class DoubleValidator(QtGui.QDoubleValidator): |
---|
| 1050 | """ |
---|
| 1051 | Allow only dots as decimal separator |
---|
| 1052 | """ |
---|
| 1053 | def validate(self, input, pos): |
---|
| 1054 | """ |
---|
| 1055 | Return invalid for commas |
---|
| 1056 | """ |
---|
[0261bc1] | 1057 | if input is not None and ',' in input: |
---|
[d6b8a1d] | 1058 | return (QtGui.QValidator.Invalid, input, pos) |
---|
| 1059 | return super(DoubleValidator, self).validate(input, pos) |
---|
| 1060 | |
---|
| 1061 | def fixup(self, input): |
---|
| 1062 | """ |
---|
| 1063 | Correct (remove) potential preexisting content |
---|
| 1064 | """ |
---|
[0261bc1] | 1065 | super(DoubleValidator, self).fixup(input) |
---|
[d6b8a1d] | 1066 | input = input.replace(",", "") |
---|
| 1067 | |
---|
[3b8cc00] | 1068 | def checkModel(path): |
---|
| 1069 | """ |
---|
| 1070 | Check that the model save in file 'path' can run. |
---|
| 1071 | """ |
---|
[27689dc] | 1072 | # The following return needs to be removed once |
---|
| 1073 | # the unittest related changes in Sasmodels are commited |
---|
[c5e0d84] | 1074 | # return True |
---|
[3b8cc00] | 1075 | # try running the model |
---|
| 1076 | from sasmodels.sasview_model import load_custom_model |
---|
| 1077 | Model = load_custom_model(path) |
---|
| 1078 | model = Model() |
---|
| 1079 | q = np.array([0.01, 0.1]) |
---|
| 1080 | _ = model.evalDistribution(q) |
---|
| 1081 | qx, qy = np.array([0.01, 0.01]), np.array([0.1, 0.1]) |
---|
| 1082 | _ = model.evalDistribution([qx, qy]) |
---|
| 1083 | |
---|
| 1084 | # check the model's unit tests run |
---|
| 1085 | from sasmodels.model_test import run_one |
---|
| 1086 | # TestSuite module in Qt5 now deletes tests in the suite after running, |
---|
| 1087 | # so suite[0] in run_one() in sasmodels/model_test.py will contain [None] and |
---|
| 1088 | # test.info.tests will raise. |
---|
| 1089 | # Not sure how to change the behaviour here, most likely sasmodels will have to |
---|
| 1090 | # be modified |
---|
| 1091 | result = run_one(path) |
---|
| 1092 | |
---|
| 1093 | return result |
---|
| 1094 | |
---|
[cb4d219] | 1095 | |
---|
[d4881f6a] | 1096 | def enum(*sequential, **named): |
---|
| 1097 | """Create an enumeration object from a list of strings""" |
---|
| 1098 | enums = dict(zip(sequential, range(len(sequential))), **named) |
---|
| 1099 | return type('Enum', (), enums) |
---|