InvariantPerspective.py @ 5d14851a

ESS_GUIESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_opencl

Last change on this file since 5d14851a was 4cdfa17, checked in by wojciech, 6 years ago
Moving qt parts to main thread in Invariant perspective
Property mode set to `100644`
File size: 31.2 KB

Rev	Line
[f721030]	1	# global
	2	import sys
	3	import os
[f1f3e6a]	4	import logging
	5	import copy
	6	import webbrowser
	7
[4992ff2]	8	from PyQt5 import QtCore
[f1f3e6a]	9	from PyQt5 import QtGui, QtWidgets
[f721030]	10
	11	from twisted.internet import threads
[1042dba]	12	from twisted.internet import reactor
[f721030]	13
	14	# sas-global
	15	from sas.sascalc.invariant import invariant
[dc5ef15]	16	from sas.qtgui.Plotting.PlotterData import Data1D
[83eb5208]	17	import sas.qtgui.Utilities.GuiUtils as GuiUtils
[f721030]	18
[f1f3e6a]	19	# import sas.qtgui.Plotting.PlotHelper as PlotHelper
	20
[f721030]	21	# local
[b3e8629]	22	from .UI.TabbedInvariantUI import Ui_tabbedInvariantUI
	23	from .InvariantDetails import DetailsDialog
	24	from .InvariantUtils import WIDGETS
[f721030]	25
	26	# The minimum q-value to be used when extrapolating
	27	Q_MINIMUM = 1e-5
	28	# The maximum q-value to be used when extrapolating
	29	Q_MAXIMUM = 10
	30	# the ratio of maximum q value/(qmax of data) to plot the theory data
	31	Q_MAXIMUM_PLOT = 3
[f1f3e6a]	32	# Default number of points of interpolation: high and low range
	33	NPOINTS_Q_INTERP = 10
	34	# Default power law for interpolation
	35	DEFAULT_POWER_LOW = 4
[f721030]	36
[f1f3e6a]	37	# Background of line edits if settings OK or wrong
	38	BG_WHITE = "background-color: rgb(255, 255, 255);"
	39	BG_RED = "background-color: rgb(244, 170, 164);"
[f721030]	40
[4992ff2]	41	class InvariantWindow(QtWidgets.QDialog, Ui_tabbedInvariantUI):
[f721030]	42	# The controller which is responsible for managing signal slots connections
	43	# for the gui and providing an interface to the data model.
[f1f3e6a]	44	name = "Invariant" # For displaying in the combo box in DataExplorer
	45
[0979dfb]	46	def __init__(self, parent=None):
	47	super(InvariantWindow, self).__init__()
[469b4622]	48	self.setupUi(self)
	49
[f721030]	50	self.setWindowTitle("Invariant Perspective")
[e540cd2]	51
[f721030]	52	# initial input params
	53	self._background = 0.0
	54	self._scale = 1.0
	55	self._contrast = 1.0
[f1f3e6a]	56	self._porod = None
	57
	58	self.parent = parent
[f721030]	59
[0979dfb]	60	self._manager = parent
[6fd4e36]	61	self._reactor = reactor
[a281ab8]	62	self._model_item = QtGui.QStandardItem()
[f721030]	63
	64	self.detailsDialog = DetailsDialog(self)
[f1f3e6a]	65	self.detailsDialog.cmdOK.clicked.connect(self.enabling)
[f721030]	66
	67	self._low_extrapolate = False
[f1f3e6a]	68	self._low_guinier = True
	69	self._low_fit = False
	70	self._low_power_value = False
	71	self._low_points = NPOINTS_Q_INTERP
	72	self._low_power_value = DEFAULT_POWER_LOW
	73
[f721030]	74	self._high_extrapolate = False
[f1f3e6a]	75	self._high_power_value = False
	76	self._high_fit = False
	77	self._high_points = NPOINTS_Q_INTERP
	78	self._high_power_value = DEFAULT_POWER_LOW
[f721030]	79
[d813cad8]	80	# no reason to have this widget resizable
[d1955d67]	81	self.resize(self.minimumSizeHint())
[28a84e9]	82
[f1f3e6a]	83	self.communicate = self._manager.communicator()
[f721030]	84
[469b4622]	85	self._data = None
	86	self._path = ""
	87
[b1e36a3]	88	self._allow_close = False
	89
[f1f3e6a]	90	# Modify font in order to display Angstrom symbol correctly
	91	new_font = 'font-family: -apple-system, "Helvetica Neue", "Ubuntu";'
	92	self.lblTotalQUnits.setStyleSheet(new_font)
	93	self.lblSpecificSurfaceUnits.setStyleSheet(new_font)
	94	self.lblInvariantTotalQUnits.setStyleSheet(new_font)
	95	self.lblContrastUnits.setStyleSheet(new_font)
	96	self.lblPorodCstUnits.setStyleSheet(new_font)
	97	self.lblExtrapolQUnits.setStyleSheet(new_font)
	98
	99	# To remove blue square around line edits
	100	self.txtBackgd.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	101	self.txtContrast.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	102	self.txtScale.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	103	self.txtPorodCst.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	104	self.txtNptsHighQ.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	105	self.txtNptsLowQ.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	106	self.txtPowerLowQ.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	107	self.txtPowerHighQ.setAttribute(QtCore.Qt.WA_MacShowFocusRect, False)
	108
	109	self.txtExtrapolQMin.setText(str(Q_MINIMUM))
	110	self.txtExtrapolQMax.setText(str(Q_MAXIMUM))
[f721030]	111
	112	# Let's choose the Standard Item Model.
	113	self.model = QtGui.QStandardItemModel(self)
	114
	115	# Connect buttons to slots.
	116	# Needs to be done early so default values propagate properly.
	117	self.setupSlots()
	118
	119	# Set up the model.
	120	self.setupModel()
	121
	122	# Set up the mapper
	123	self.setupMapper()
	124
[7c487846]	125	# Default enablement
	126	self.cmdCalculate.setEnabled(False)
	127
[f1f3e6a]	128	# validator: double
[7c487846]	129	self.txtBackgd.setValidator(GuiUtils.DoubleValidator())
	130	self.txtContrast.setValidator(GuiUtils.DoubleValidator())
	131	self.txtScale.setValidator(GuiUtils.DoubleValidator())
	132	self.txtPorodCst.setValidator(GuiUtils.DoubleValidator())
[f1f3e6a]	133
	134	# validator: integer number
[7c487846]	135	self.txtNptsLowQ.setValidator(QtGui.QIntValidator())
	136	self.txtNptsHighQ.setValidator(QtGui.QIntValidator())
	137	self.txtPowerLowQ.setValidator(GuiUtils.DoubleValidator())
	138	self.txtPowerHighQ.setValidator(GuiUtils.DoubleValidator())
[f1f3e6a]	139
	140	def enabling(self):
	141	""" """
	142	self.cmdStatus.setEnabled(True)
[457d961]	143
[b1e36a3]	144	def setClosable(self, value=True):
[f1f3e6a]	145	""" Allow outsiders close this widget """
[b1e36a3]	146	assert isinstance(value, bool)
	147
	148	self._allow_close = value
	149
	150	def closeEvent(self, event):
	151	"""
	152	Overwrite QDialog close method to allow for custom widget close
	153	"""
	154	if self._allow_close:
	155	# reset the closability flag
	156	self.setClosable(value=False)
[7c487846]	157	# Tell the MdiArea to close the container
	158	self.parentWidget().close()
[b1e36a3]	159	event.accept()
	160	else:
	161	event.ignore()
	162	# Maybe we should just minimize
	163	self.setWindowState(QtCore.Qt.WindowMinimized)
[e540cd2]	164
[f721030]	165	def updateFromModel(self):
[f1f3e6a]	166	""" Update the globals based on the data in the model """
[f721030]	167	self._background = float(self.model.item(WIDGETS.W_BACKGROUND).text())
[f1f3e6a]	168	self._contrast = float(self.model.item(WIDGETS.W_CONTRAST).text())
	169	self._scale = float(self.model.item(WIDGETS.W_SCALE).text())
	170	if self.model.item(WIDGETS.W_POROD_CST).text() != 'None' \
	171	and self.model.item(WIDGETS.W_POROD_CST).text() != '':
	172	self._porod = float(self.model.item(WIDGETS.W_POROD_CST).text())
	173
	174	# Low extrapolating
	175	self._low_extrapolate = str(self.model.item(WIDGETS.W_ENABLE_LOWQ).text()) == 'true'
[f721030]	176	self._low_points = float(self.model.item(WIDGETS.W_NPTS_LOWQ).text())
[f1f3e6a]	177	self._low_guinier = str(self.model.item(WIDGETS.W_LOWQ_GUINIER).text()) == 'true'
	178	self._low_fit = str(self.model.item(WIDGETS.W_LOWQ_FIT).text()) == 'true'
	179	self._low_power_value = float(self.model.item(WIDGETS.W_LOWQ_POWER_VALUE).text())
[f721030]	180
	181	# High extrapolating
[f1f3e6a]	182	self._high_extrapolate = str(self.model.item(WIDGETS.W_ENABLE_HIGHQ).text()) == 'true'
	183	self._high_points = float(self.model.item(WIDGETS.W_NPTS_HIGHQ).text())
	184	self._high_fit = str(self.model.item(WIDGETS.W_HIGHQ_FIT).text()) == 'true'
	185	self._high_power_value = float(self.model.item(WIDGETS.W_HIGHQ_POWER_VALUE).text())
[f721030]	186
[a281ab8]	187	def calculateInvariant(self):
[f1f3e6a]	188	""" Use twisted to thread the calculations away """
[f721030]	189	# Find out if extrapolation needs to be used.
	190	extrapolation = None
[f1f3e6a]	191	if self._low_extrapolate and not self._high_extrapolate:
[f721030]	192	extrapolation = "low"
[f1f3e6a]	193	elif not self._low_extrapolate and self._high_extrapolate:
[f721030]	194	extrapolation = "high"
	195	elif self._low_extrapolate and self._high_extrapolate:
	196	extrapolation = "both"
	197
[f1f3e6a]	198	# modify the Calculate button to indicate background process
	199	self.cmdCalculate.setText("Calculating...")
	200	self.cmdCalculate.setEnabled(False)
	201
	202	# Send the calculations to separate thread.
	203	d = threads.deferToThread(self.calculateThread, extrapolation)
	204
	205	# Add deferred callback for call return
	206	d.addCallback(self.deferredPlot)
	207	d.addErrback(self.calculationFailed)
	208
	209	def calculationFailed(self, reason):
	210	print("calculation failed: ", reason)
[7fb471d]	211	pass
[5032ea68]	212
[f1f3e6a]	213	def deferredPlot(self, model):
[f721030]	214	"""
[f1f3e6a]	215	Run the GUI/model update in the main thread
[f721030]	216	"""
[f1f3e6a]	217	reactor.callFromThread(lambda: self.plotResult(model))
[f721030]	218
[f1f3e6a]	219	def plotResult(self, model):
	220	""" Plot result of calculation """
[f721030]	221	# Set the button back to available
[f1f3e6a]	222	self.cmdCalculate.setEnabled(True)
	223	self.cmdCalculate.setText("Calculate")
	224	self.cmdStatus.setEnabled(True)
	225
	226	self.model = model
[9387fe3]	227	self.mapper.toFirst()
[f1f3e6a]	228	self._data = GuiUtils.dataFromItem(self._model_item)
[f721030]	229
[a281ab8]	230	# Send the modified model item to DE for keeping in the model
[f1f3e6a]	231	# Currently -unused
[6cb305a]	232	# self.communicate.updateModelFromPerspectiveSignal.emit(self._model_item)
[f1f3e6a]	233
	234	plot_data = GuiUtils.plotsFromCheckedItems(self._manager.filesWidget.model)
[9ce69ec]	235	#self.communicate.plotRequestedSignal.emit([item, plot], self.tab_id)
[f1f3e6a]	236
	237	self._manager.filesWidget.plotData(plot_data)
[5032ea68]	238
[f1f3e6a]	239	# Update the details dialog in case it is open
	240	self.updateDetailsWidget(model)
	241
	242	def updateDetailsWidget(self, model):
	243	"""
	244	On demand update of the details widget
	245	"""
	246	if self.detailsDialog.isVisible():
	247	self.onStatus()
[f721030]	248
	249	def calculateThread(self, extrapolation):
	250	"""
[5032ea68]	251	Perform Invariant calculations.
	252	TODO: Create a dictionary of results to be sent to DE on completion.
[f721030]	253	"""
	254	self.updateFromModel()
[f1f3e6a]	255	msg = ''
[f721030]	256
	257	qstar_low = 0.0
	258	qstar_low_err = 0.0
	259	qstar_high = 0.0
	260	qstar_high_err = 0.0
	261	qstar_total = 0.0
[f1f3e6a]	262	qstar_total_error = 0.0
[f721030]	263
[f1f3e6a]	264	temp_data = copy.deepcopy(self._data)
[f721030]	265
[f1f3e6a]	266	# Prepare the invariant object
	267	inv = invariant.InvariantCalculator(data=temp_data,
	268	background=self._background,
	269	scale=self._scale)
[f721030]	270	if self._low_extrapolate:
[f1f3e6a]	271
[f721030]	272	function_low = "power_law"
	273	if self._low_guinier:
	274	function_low = "guinier"
	275	if self._low_fit:
	276	self._low_power_value = None
[f1f3e6a]	277
[f721030]	278	inv.set_extrapolation(range="low",
[f1f3e6a]	279	npts=int(self._low_points),
[f721030]	280	function=function_low,
	281	power=self._low_power_value)
	282
	283	if self._high_extrapolate:
	284	function_low = "power_law"
	285	inv.set_extrapolation(range="high",
[f1f3e6a]	286	npts=int(self._high_points),
[f721030]	287	function=function_low,
[f1f3e6a]	288	power=self._high_power_value)
	289	# Compute invariant
[f721030]	290	calculation_failed = False
[f1f3e6a]	291
[f721030]	292	try:
[f1f3e6a]	293	qstar_total, qstar_total_error = inv.get_qstar_with_error()
[f721030]	294	except Exception as ex:
[f1f3e6a]	295	msg += str(ex)
[f721030]	296	calculation_failed = True
	297	# Display relevant information
	298	item = QtGui.QStandardItem("ERROR")
	299	self.model.setItem(WIDGETS.W_INVARIANT, item)
	300	item = QtGui.QStandardItem("ERROR")
	301	self.model.setItem(WIDGETS.W_INVARIANT_ERR, item)
[f1f3e6a]	302
[f721030]	303	try:
	304	volume_fraction, volume_fraction_error = \
	305	inv.get_volume_fraction_with_error(self._contrast)
[f1f3e6a]	306
[f721030]	307	except Exception as ex:
	308	calculation_failed = True
[f1f3e6a]	309	msg += str(ex)
[f721030]	310	# Display relevant information
	311	item = QtGui.QStandardItem("ERROR")
	312	self.model.setItem(WIDGETS.W_VOLUME_FRACTION, item)
	313	item = QtGui.QStandardItem("ERROR")
	314	self.model.setItem(WIDGETS.W_VOLUME_FRACTION_ERR, item)
	315
[f1f3e6a]	316	if self._porod:
	317	try:
	318	surface, surface_error = \
	319	inv.get_surface_with_error(self._contrast, self._porod)
	320	except Exception as ex:
	321	calculation_failed = True
	322	msg += str(ex)
	323	# Display relevant information
	324	item = QtGui.QStandardItem("ERROR")
	325	self.model.setItem(WIDGETS.W_SPECIFIC_SURFACE, item)
	326	item = QtGui.QStandardItem("ERROR")
	327	self.model.setItem(WIDGETS.W_SPECIFIC_SURFACE_ERR, item)
	328	else:
	329	surface = None
	330
[1dc1d431]	331	if (calculation_failed):
	332	logging.warning('Calculation failed: {}'.format(msg))
	333	return self.model
	334
	335	low_calculation_pass = True
	336	high_calculation_pass = True
[740c381]	337	if self._low_extrapolate:
	338	try:
	339	qstar_low, qstar_low_err = inv.get_qstar_low()
	340	except Exception as ex:
[1dc1d431]	341	low_calculation_pass = False
[740c381]	342	msg += str(ex)
[1dc1d431]	343	logging.warning('Low-q calculation failed: {}'.format(msg))
[740c381]	344	if self._high_extrapolate:
	345	try:
	346	qstar_high, qstar_high_err = inv.get_qstar_high()
	347	except Exception as ex:
[1dc1d431]	348	high_calculation_pass = False
[740c381]	349	msg += str(ex)
[1dc1d431]	350	logging.warning('High-q calculation failed: {}'.format(msg))
[740c381]	351
[aea6bb7]	352
[1dc1d431]	353	if self._low_extrapolate and low_calculation_pass:
[aea6bb7]	354	extrapolated_data = inv.get_extra_data_low(self._low_points)
	355	power_low = inv.get_extrapolation_power(range='low')
	356
	357	# Plot the chart
	358	title = "Low-Q extrapolation"
	359
	360	# Convert the data into plottable
	361	extrapolated_data = self._manager.createGuiData(extrapolated_data)
	362
	363	extrapolated_data.name = title
	364	extrapolated_data.title = title
	365	extrapolated_data.symbol = "Line"
	366	extrapolated_data.has_errors = False
	367
	368	# copy labels and units of axes for plotting
	369	extrapolated_data._xaxis = temp_data._xaxis
	370	extrapolated_data._xunit = temp_data._xunit
	371	extrapolated_data._yaxis = temp_data._yaxis
	372	extrapolated_data._yunit = temp_data._yunit
	373
	374	# Add the plot to the model item
	375	# This needs to run in the main thread
	376	reactor.callFromThread(GuiUtils.updateModelItemWithPlot,
[f1f3e6a]	377	self._model_item,
	378	extrapolated_data,
	379	title)
	380
[1dc1d431]	381	if self._high_extrapolate and high_calculation_pass:
[aea6bb7]	382	# for presentation in InvariantDetails
	383	qmax_plot = Q_MAXIMUM_PLOT * max(temp_data.x)
	384
	385	if qmax_plot > Q_MAXIMUM:
	386	qmax_plot = Q_MAXIMUM
	387	power_high = inv.get_extrapolation_power(range='high')
	388	high_out_data = inv.get_extra_data_high(q_end=qmax_plot, npts=500)
	389
	390	# Plot the chart
	391	title = "High-Q extrapolation"
	392
	393	# Convert the data into plottable
	394	high_out_data = self._manager.createGuiData(high_out_data)
	395	high_out_data.name = title
	396	high_out_data.title = title
	397	high_out_data.symbol = "Line"
	398	high_out_data.has_errors = False
	399
	400	# copy labels and units of axes for plotting
	401	high_out_data._xaxis = temp_data._xaxis
	402	high_out_data._xunit = temp_data._xunit
	403	high_out_data._yaxis = temp_data._yaxis
	404	high_out_data._yunit = temp_data._yunit
	405
	406	# Add the plot to the model item
	407	# This needs to run in the main thread
	408	reactor.callFromThread(GuiUtils.updateModelItemWithPlot,
[f1f3e6a]	409	self._model_item, high_out_data, title)
	410
[4cdfa17]	411	reactor.callFromThread(self.updateModelFromThread, WIDGETS.W_VOLUME_FRACTION, volume_fraction)
	412	reactor.callFromThread(self.updateModelFromThread, WIDGETS.W_VOLUME_FRACTION_ERR, volume_fraction_error)
[aea6bb7]	413	if surface:
[4cdfa17]	414	reactor.callFromThread(self.updateModelFromThread, WIDGETS.W_SPECIFIC_SURFACE, surface)
	415	reactor.callFromThread(self.updateModelFromThread, WIDGETS.W_SPECIFIC_SURFACE_ERR,
	416	surface_error)
	417
	418	reactor.callFromThread(self.updateModelFromThread, WIDGETS.W_INVARIANT, qstar_total)
	419	reactor.callFromThread(self.updateModelFromThread, WIDGETS.W_INVARIANT_ERR, qstar_total_error)
	420	reactor.callFromThread(self.updateModelFromThread, WIDGETS.D_LOW_QSTAR, qstar_low)
	421	reactor.callFromThread(self.updateModelFromThread, WIDGETS.D_LOW_QSTAR_ERR, qstar_low_err)
	422	reactor.callFromThread(self.updateModelFromThread, WIDGETS.D_HIGH_QSTAR, qstar_high)
	423	reactor.callFromThread(self.updateModelFromThread, WIDGETS.D_HIGH_QSTAR_ERR, qstar_high_err)
[aea6bb7]	424	return self.model
[f721030]	425
[4cdfa17]	426
	427	def updateModelFromThread(self, widget, value):
	428	"""
	429	Update the model in the main thread
	430	"""
	431	item = QtGui.QStandardItem(str(float('%.3g' % value)))
	432	self.model.setItem(widget, item)
	433
[5032ea68]	434	def title(self):
[f1f3e6a]	435	""" Perspective name """
[5032ea68]	436	return "Invariant panel"
[f721030]	437
[f1f3e6a]	438	def onStatus(self):
[f721030]	439	"""
[f1f3e6a]	440	Display Invariant Details panel when clicking on Status button
[f721030]	441	"""
	442	self.detailsDialog.setModel(self.model)
	443	self.detailsDialog.showDialog()
[f1f3e6a]	444	self.cmdStatus.setEnabled(False)
[f721030]	445
[f1f3e6a]	446	def onHelp(self):
	447	""" Display help when clicking on Help button """
[aed0532]	448	treeLocation = "/user/qtgui/Perspectives/Invariant/invariant_help.html"
[e90988c]	449	self.parent.showHelp(treeLocation)
[f721030]	450
	451	def setupSlots(self):
[f1f3e6a]	452	""" """
	453	self.cmdCalculate.clicked.connect(self.calculateInvariant)
	454	self.cmdStatus.clicked.connect(self.onStatus)
	455	self.cmdHelp.clicked.connect(self.onHelp)
[f721030]	456
[f1f3e6a]	457	self.chkLowQ.stateChanged.connect(self.stateChanged)
	458	self.chkLowQ.stateChanged.connect(self.checkQExtrapolatedData)
[f721030]	459
[f1f3e6a]	460	self.chkHighQ.stateChanged.connect(self.stateChanged)
	461	self.chkHighQ.stateChanged.connect(self.checkQExtrapolatedData)
[f721030]	462
[f1f3e6a]	463	# slots for the Guinier and PowerLaw radio buttons at low Q
	464	# since they are not auto-exclusive
	465	self.rbGuinier.toggled.connect(self.lowGuinierAndPowerToggle)
	466
	467	self.rbPowerLawLowQ.toggled.connect(self.lowGuinierAndPowerToggle)
	468
	469	self.rbFitHighQ.toggled.connect(self.hiFitAndFixToggle)
	470
	471	self.rbFitLowQ.toggled.connect(self.lowFitAndFixToggle)
[f721030]	472
	473	self.model.itemChanged.connect(self.modelChanged)
	474
[f1f3e6a]	475	# update model from gui editing by users
	476	self.txtBackgd.textChanged.connect(self.updateFromGui)
	477
	478	self.txtScale.textChanged.connect(self.updateFromGui)
	479
	480	self.txtContrast.textChanged.connect(self.updateFromGui)
	481
	482	self.txtPorodCst.textChanged.connect(self.updateFromGui)
	483
	484	self.txtPowerLowQ.textChanged.connect(self.updateFromGui)
	485
	486	self.txtPowerHighQ.textChanged.connect(self.updateFromGui)
	487
	488	self.txtNptsLowQ.textChanged.connect(self.updateFromGui)
	489
	490	self.txtNptsHighQ.textChanged.connect(self.updateFromGui)
	491
	492	# check values of n_points compared to distribution length
	493	if self.txtNptsLowQ.isEnabled():
	494	self.txtNptsLowQ.textChanged.connect(self.checkLength)
	495
	496	if self.txtNptsHighQ.isEnabled():
	497	self.txtNptsHighQ.textChanged.connect(self.checkLength)
	498
	499	def stateChanged(self):
[f721030]	500	"""
[f1f3e6a]	501	Catch modifications from low- and high-Q extrapolation check boxes
[f721030]	502	"""
[f1f3e6a]	503	sender = self.sender()
	504
	505	itemf = QtGui.QStandardItem(str(sender.isChecked()).lower())
	506	if sender.text() == 'Enable Low-Q extrapolation':
	507	self.model.setItem(WIDGETS.W_ENABLE_LOWQ, itemf)
	508
	509	if sender.text() == 'Enable High-Q extrapolation':
	510	self.model.setItem(WIDGETS.W_ENABLE_HIGHQ, itemf)
	511
	512	def checkLength(self):
	513	"""
	514	Validators of number of points for extrapolation.
	515	Error if it is larger than the distribution length
	516	"""
[7c487846]	517	try:
	518	int_value = int(self.sender().text())
	519	except ValueError:
	520	self.sender().setStyleSheet(BG_RED)
	521	self.cmdCalculate.setEnabled(False)
	522	return
	523
[f1f3e6a]	524	if self._data:
[7c487846]	525	if len(self._data.x) < int_value:
	526	self.sender().setStyleSheet(BG_RED)
[f1f3e6a]	527	logging.warning('The number of points must be smaller than {}'.format(len(self._data.x)))
	528	self.cmdCalculate.setEnabled(False)
	529	else:
[7c487846]	530	self.sender().setStyleSheet(BG_WHITE)
[f1f3e6a]	531	self.cmdCalculate.setEnabled(True)
	532	else:
	533	# logging.info('no data is loaded')
	534	self.cmdCalculate.setEnabled(False)
	535
	536	def modelChanged(self, item):
	537	""" Update when model changed """
[f721030]	538	if item.row() == WIDGETS.W_ENABLE_LOWQ:
	539	toggle = (str(item.text()) == 'true')
	540	self._low_extrapolate = toggle
	541	self.lowQToggle(toggle)
	542	elif item.row() == WIDGETS.W_ENABLE_HIGHQ:
	543	toggle = (str(item.text()) == 'true')
	544	self._high_extrapolate = toggle
	545	self.highQToggle(toggle)
[f1f3e6a]	546
	547	def checkQExtrapolatedData(self):
[f721030]	548	"""
[f1f3e6a]	549	Match status of low or high-Q extrapolated data checkbox in
	550	DataExplorer with low or high-Q extrapolation checkbox in invariant
	551	panel
[f721030]	552	"""
[f1f3e6a]	553	# name to search in DataExplorer
	554	if 'Low' in str(self.sender().text()):
	555	name = "Low-Q extrapolation"
	556	if 'High' in str(self.sender().text()):
	557	name = "High-Q extrapolation"
[f721030]	558
[f1f3e6a]	559	GuiUtils.updateModelItemStatus(self._manager.filesWidget.model,
	560	self._path, name,
	561	self.sender().checkState())
	562
	563	def updateFromGui(self):
	564	""" Update model when new user inputs """
	565	possible_senders = ['txtBackgd', 'txtContrast', 'txtPorodCst',
	566	'txtScale', 'txtPowerLowQ', 'txtPowerHighQ',
	567	'txtNptsLowQ', 'txtNptsHighQ']
	568
	569	related_widgets = [WIDGETS.W_BACKGROUND, WIDGETS.W_CONTRAST,
	570	WIDGETS.W_POROD_CST, WIDGETS.W_SCALE,
	571	WIDGETS.W_LOWQ_POWER_VALUE, WIDGETS.W_HIGHQ_POWER_VALUE,
	572	WIDGETS.W_NPTS_LOWQ, WIDGETS.W_NPTS_HIGHQ]
	573
	574	related_internal_values = [self._background, self._contrast,
	575	self._porod, self._scale,
	576	self._low_power_value,
	577	self._high_power_value,
	578	self._low_points, self._high_points]
	579
	580	item = QtGui.QStandardItem(self.sender().text())
	581
	582	index_elt = possible_senders.index(self.sender().objectName())
	583
	584	self.model.setItem(related_widgets[index_elt], item)
[7c487846]	585	try:
	586	related_internal_values[index_elt] = float(self.sender().text())
	587	self.sender().setStyleSheet(BG_WHITE)
	588	self.cmdCalculate.setEnabled(True)
	589	except ValueError:
	590	# empty field, just skip
	591	self.sender().setStyleSheet(BG_RED)
	592	self.cmdCalculate.setEnabled(False)
[f1f3e6a]	593
	594	def lowGuinierAndPowerToggle(self, toggle):
[f721030]	595	"""
[f1f3e6a]	596	Guinier and Power radio buttons cannot be selected at the same time
	597	If Power is selected, Fit and Fix radio buttons are visible and
	598	Power line edit can be edited if Fix is selected
[f721030]	599	"""
[f1f3e6a]	600	if self.sender().text() == 'Guinier':
	601	self._low_guinier = toggle
	602
	603	toggle = not toggle
	604	self.rbPowerLawLowQ.setChecked(toggle)
	605
	606	self.rbFitLowQ.toggled.connect(self.lowFitAndFixToggle)
	607	self.rbFitLowQ.setVisible(toggle)
	608	self.rbFixLowQ.setVisible(toggle)
	609
	610	self.txtPowerLowQ.setEnabled(toggle and (not self._low_fit))
	611
	612	else:
	613	self._low_guinier = not toggle
	614
	615	self.rbGuinier.setChecked(not toggle)
	616
	617	self.rbFitLowQ.toggled.connect(self.lowFitAndFixToggle)
	618	self.rbFitLowQ.setVisible(toggle)
	619	self.rbFixLowQ.setVisible(toggle)
	620
	621	self.txtPowerLowQ.setEnabled(toggle and (not self._low_fit))
	622
	623	def lowFitAndFixToggle(self, toggle):
	624	""" Fit and Fix radiobuttons cannot be selected at the same time """
[f721030]	625	self._low_fit = toggle
[f1f3e6a]	626
[f721030]	627	toggle = not toggle
[f1f3e6a]	628	self.txtPowerLowQ.setEnabled(toggle)
[f721030]	629
	630	def hiFitAndFixToggle(self, toggle):
	631	"""
[f1f3e6a]	632	Enable editing of power exponent if Fix for high Q is checked
	633	Disable otherwise
[f721030]	634	"""
[f1f3e6a]	635	self.txtPowerHighQ.setEnabled(not toggle)
[f721030]	636
	637	def highQToggle(self, clicked):
[f1f3e6a]	638	""" Disable/enable High Q extrapolation """
	639	self.rbFitHighQ.setEnabled(clicked)
	640	self.rbFixHighQ.setEnabled(clicked)
	641	self.txtNptsHighQ.setEnabled(clicked)
	642	self.txtPowerHighQ.setEnabled(clicked)
[f721030]	643
	644	def lowQToggle(self, clicked):
[f1f3e6a]	645	""" Disable / enable Low Q extrapolation """
	646	self.rbGuinier.setEnabled(clicked)
	647	self.rbPowerLawLowQ.setEnabled(clicked)
	648	self.txtNptsLowQ.setEnabled(clicked)
[f721030]	649	# Enable subelements
[f1f3e6a]	650	self.rbFitLowQ.setVisible(self.rbPowerLawLowQ.isChecked())
	651	self.rbFixLowQ.setVisible(self.rbPowerLawLowQ.isChecked())
	652	self.rbFitLowQ.setEnabled(clicked) # and not self._low_guinier)
	653	self.rbFixLowQ.setEnabled(clicked) # and not self._low_guinier)
[f721030]	654
[f1f3e6a]	655	self.txtPowerLowQ.setEnabled(clicked
	656	and not self._low_guinier
	657	and not self._low_fit)
[f721030]	658
[f1f3e6a]	659	def setupModel(self):
	660	""" """
[f721030]	661	# filename
	662	item = QtGui.QStandardItem(self._path)
	663	self.model.setItem(WIDGETS.W_FILENAME, item)
	664
	665	# add Q parameters to the model
[469b4622]	666	qmin = 0.0
[f721030]	667	item = QtGui.QStandardItem(str(qmin))
	668	self.model.setItem(WIDGETS.W_QMIN, item)
[469b4622]	669	qmax = 0.0
	670	item = QtGui.QStandardItem(str(qmax))
[f721030]	671	self.model.setItem(WIDGETS.W_QMAX, item)
	672
	673	# add custom input params
	674	item = QtGui.QStandardItem(str(self._background))
	675	self.model.setItem(WIDGETS.W_BACKGROUND, item)
	676	item = QtGui.QStandardItem(str(self._contrast))
	677	self.model.setItem(WIDGETS.W_CONTRAST, item)
	678	item = QtGui.QStandardItem(str(self._scale))
	679	self.model.setItem(WIDGETS.W_SCALE, item)
[f1f3e6a]	680	# leave line edit empty if Porod constant not defined
	681	if self._porod != None:
	682	item = QtGui.QStandardItem(str(self._porod))
	683	else:
	684	item = QtGui.QStandardItem(str(''))
	685	self.model.setItem(WIDGETS.W_POROD_CST, item)
	686
[f721030]	687	# Dialog elements
	688	itemf = QtGui.QStandardItem("false")
	689	self.model.setItem(WIDGETS.W_ENABLE_HIGHQ, itemf)
	690	itemf = QtGui.QStandardItem("false")
	691	self.model.setItem(WIDGETS.W_ENABLE_LOWQ, itemf)
	692
[f1f3e6a]	693	item = QtGui.QStandardItem(str(NPOINTS_Q_INTERP))
[f721030]	694	self.model.setItem(WIDGETS.W_NPTS_LOWQ, item)
[f1f3e6a]	695	item = QtGui.QStandardItem(str(NPOINTS_Q_INTERP))
[f721030]	696	self.model.setItem(WIDGETS.W_NPTS_HIGHQ, item)
	697
	698	itemt = QtGui.QStandardItem("true")
	699	self.model.setItem(WIDGETS.W_LOWQ_GUINIER, itemt)
	700
	701	itemt = QtGui.QStandardItem("true")
	702	self.model.setItem(WIDGETS.W_LOWQ_FIT, itemt)
[f1f3e6a]	703	item = QtGui.QStandardItem(str(DEFAULT_POWER_LOW))
[f721030]	704	self.model.setItem(WIDGETS.W_LOWQ_POWER_VALUE, item)
	705
	706	itemt = QtGui.QStandardItem("true")
	707	self.model.setItem(WIDGETS.W_HIGHQ_FIT, itemt)
[f1f3e6a]	708	item = QtGui.QStandardItem(str(DEFAULT_POWER_LOW))
[f721030]	709	self.model.setItem(WIDGETS.W_HIGHQ_POWER_VALUE, item)
	710
	711	def setupMapper(self):
	712	# Set up the mapper.
[4992ff2]	713	self.mapper = QtWidgets.QDataWidgetMapper(self)
[f721030]	714	self.mapper.setOrientation(QtCore.Qt.Vertical)
	715	self.mapper.setModel(self.model)
	716
	717	# Filename
[f1f3e6a]	718	self.mapper.addMapping(self.txtName, WIDGETS.W_FILENAME)
	719
[f721030]	720	# Qmin/Qmax
[f1f3e6a]	721	self.mapper.addMapping(self.txtTotalQMin, WIDGETS.W_QMIN)
	722	self.mapper.addMapping(self.txtTotalQMax, WIDGETS.W_QMAX)
[f721030]	723
	724	# Background
[f1f3e6a]	725	self.mapper.addMapping(self.txtBackgd, WIDGETS.W_BACKGROUND)
	726
[f721030]	727	# Scale
[f1f3e6a]	728	self.mapper.addMapping(self.txtScale, WIDGETS.W_SCALE)
	729
[f721030]	730	# Contrast
[f1f3e6a]	731	self.mapper.addMapping(self.txtContrast, WIDGETS.W_CONTRAST)
[f721030]	732
[f1f3e6a]	733	# Porod constant
	734	self.mapper.addMapping(self.txtPorodCst, WIDGETS.W_POROD_CST)
[f721030]	735
[f1f3e6a]	736	# Lowq/Highq items
	737	self.mapper.addMapping(self.chkLowQ, WIDGETS.W_ENABLE_LOWQ)
	738	self.mapper.addMapping(self.chkHighQ, WIDGETS.W_ENABLE_HIGHQ)
[f721030]	739
[f1f3e6a]	740	self.mapper.addMapping(self.txtNptsLowQ, WIDGETS.W_NPTS_LOWQ)
	741	self.mapper.addMapping(self.rbGuinier, WIDGETS.W_LOWQ_GUINIER)
	742	self.mapper.addMapping(self.rbFitLowQ, WIDGETS.W_LOWQ_FIT)
	743	self.mapper.addMapping(self.txtPowerLowQ, WIDGETS.W_LOWQ_POWER_VALUE)
[f721030]	744
[f1f3e6a]	745	self.mapper.addMapping(self.txtNptsHighQ, WIDGETS.W_NPTS_HIGHQ)
	746	self.mapper.addMapping(self.rbFitHighQ, WIDGETS.W_HIGHQ_FIT)
	747	self.mapper.addMapping(self.txtPowerHighQ, WIDGETS.W_HIGHQ_POWER_VALUE)
[f721030]	748
	749	# Output
[f1f3e6a]	750	self.mapper.addMapping(self.txtVolFract, WIDGETS.W_VOLUME_FRACTION)
	751	self.mapper.addMapping(self.txtVolFractErr, WIDGETS.W_VOLUME_FRACTION_ERR)
	752	self.mapper.addMapping(self.txtSpecSurf, WIDGETS.W_SPECIFIC_SURFACE)
	753	self.mapper.addMapping(self.txtSpecSurfErr, WIDGETS.W_SPECIFIC_SURFACE_ERR)
	754	self.mapper.addMapping(self.txtInvariantTot, WIDGETS.W_INVARIANT)
	755	self.mapper.addMapping(self.txtInvariantTotErr, WIDGETS.W_INVARIANT_ERR)
[f721030]	756
[f1f3e6a]	757	self.mapper.toFirst()
[f721030]	758
[f1f3e6a]	759	def setData(self, data_item=None, is_batch=False):
[a281ab8]	760	"""
	761	Obtain a QStandardItem object and dissect it to get Data1D/2D
	762	Pass it over to the calculator
	763	"""
[f1f3e6a]	764	assert data_item is not None
	765
	766	if self.txtName.text() == data_item[0].text():
	767	logging.info('This file is already loaded in Invariant panel.')
	768	return
	769
[a281ab8]	770	if not isinstance(data_item, list):
	771	msg = "Incorrect type passed to the Invariant Perspective"
[b3e8629]	772	raise AttributeError(msg)
[a281ab8]	773
	774	if not isinstance(data_item[0], QtGui.QStandardItem):
	775	msg = "Incorrect type passed to the Invariant Perspective"
[b3e8629]	776	raise AttributeError(msg)
[a281ab8]	777
[f1f3e6a]	778	# only 1 file can be loaded
[a281ab8]	779	self._model_item = data_item[0]
	780
	781	# Extract data on 1st child - this is the Data1D/2D component
[8548d739]	782	data = GuiUtils.dataFromItem(self._model_item)
[7c487846]	783	self.model.item(WIDGETS.W_FILENAME).setData(self._model_item.text())
[f1f3e6a]	784	# update GUI and model with info from loaded data
	785	self.updateGuiFromFile(data=data)
[a281ab8]	786
[f1f3e6a]	787	def updateGuiFromFile(self, data=None):
[f721030]	788	"""
[f1f3e6a]	789	update display in GUI and plot
[f721030]	790	"""
[f1f3e6a]	791	self._data = data
	792
	793	# plot loaded file
	794	if not isinstance(self._data, Data1D):
[6ae7466]	795	msg = "Invariant cannot be computed with 2D data."
	796	raise ValueError(msg)
[f1f3e6a]	797
	798	try:
	799	filename = data.filename
	800	except:
[6ae7466]	801	msg = 'No filename chosen.'
[f1f3e6a]	802	raise ValueError(msg)
	803	try:
	804	qmin = min(self._data.x)
	805	qmax = max(self._data.x)
	806	except:
	807	msg = "Unable to find q min/max of \n data named %s" % \
	808	data.filename
	809	raise ValueError(msg)
	810
	811	# update model with input form files: filename, qmin, qmax
	812	self.model.item(WIDGETS.W_FILENAME).setText(filename)
	813	self.model.item(WIDGETS.W_QMIN).setText(str(qmin))
	814	self.model.item(WIDGETS.W_QMAX).setText(str(qmax))
	815	self._path = filename
	816
	817	# Calculate and add to GUI: volume fraction, invariant total,
	818	# and specific surface if porod checked
	819	self.calculateInvariant()
[f721030]	820
[5032ea68]	821	def allowBatch(self):
	822	"""
	823	Tell the caller that we don't accept multiple data instances
	824	"""
	825	return False

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SasView

source: sasview/src/sas/qtgui/Perspectives/Invariant/InvariantPerspective.py @ 5d14851a

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