source: sasview/src/sas/perspectives/invariant/media/invariant_help.rst @ 960b2de

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Last change on this file since 960b2de was ec392464, checked in by smk78, 10 years ago

New ReST help files location for perspective help

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[ec392464]1.. invariant_help.rst
2
3.. This is a port of the original SasView html help file to ReSTructured text
4.. by S King, ISIS, during SasView CodeCamp-III in Feb 2015.
5
6Invariant Calculation Perspective
7=================================
8
9Scattering_Invariant_
10
11Volume_Fraction_
12
13Specific_Surface_Area_
14
15Definitions_
16
17Reference_
18
19How_to_Use_
20
21.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
22
23.. _Scattering_Invariant:
24
25Scattering Invariant
26--------------------
27
28The scattering invariant (Q*) is a model-independent quantity that can be
29easily calculated from scattering data.
30
31For two phase systems, the scattering invariant, Q*, is defined as the
32integral of the square of the wave transfer (q) multiplied by the scattering
33cross section over the full range of q.
34
35Q* is given by the following equation
36
37.. image:: image001.gif
38
39This model independent quantity (Q*) is calculated from the scattering data
40that can be used to determine the volume fraction and the specific area of the
41sample under consideration.
42
43These quantities are useful in their own right and can be used in further
44analysis. With this scattering invariant module users will also be able to
45determine the consistency of those properties between data. There is no real
46data defined from zero to infinity, there usually have limited range.
47
48Q* is not really computed from zero to infinity. Our maximum q range is
491e-5 ~ 10 (1/Angstrom). The lower and/or higher q range than data given can be
50extrapolated by fitting some data nearby.
51
52The scattering invariant is computed as follows
53
54*I(q)* = *I(q)*  w/o background : If the data includes a background, user sets
55the value to subtract the background for the Q* computation.
56
57Reset *I(q)* = *I(q)* scaling factor* , delta *I(q) =*  delta *I(q)*scaling
58factor* : If non-zero scaling factor is given, it will be considered.
59
60Invariant
61
62.. image:: image001.gif
63
64where *g =q*  for the pinhole geometry and *g =qv*  (the slit height) for the
65slit geometry which can be given in data or as a value.
66
67Higher q-region (\>= qmax in data)
68
69Power law (w/o background term) function = C/q4will be used
70
71where the constant C(=2pi(delta(rho))Sv) is to be found by fitting part of
72data with the range of qN-mto qN(m\<N).
73
74Lower q-region (\<= qmin in data):
75
76Guinier function = *I0exp(-Rg2q2/3)*  where I0and Rgare obtained by fitting,
77
78similarly to the high q region above.
79
80Power law can also be used.
81
82.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
83
84.. _Volume_Fraction:
85
86Volume Fraction
87---------------
88
89.. image:: image002.gif
90
91where delta(rho) is the SLD contrast of which value is given by users.
92
93.. image:: image003.gif
94
95Thus
96
97where 0 =\< *A*  =\<1/4 in order for these values to be physically valid.
98
99.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
100
101.. _Specific_Surface_Area:
102
103Specific Surface Area
104---------------------
105
106.. image:: image004.gif
107
108where *A*  and *Q**  are obtained from previous sections, and the Porod
109constant *Cp*  is given by users.
110
111.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
112
113.. _Definitions:
114
115Definitions
116-----------
117
118Q: the magnitude of neutron (or X-ray) momentum transfer vector.
119
120I(Q): the scattering intensity as a function of the momentum transfer Q.
121
122Invariant total is the sum of the invariant calculated from datas q range and
123the invariant resulting from extrapolation at low q range and at high q range
124if considered.
125
126.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
127
128.. _Reference:
129
130References
131----------
132
133Chapter 2 in O. Glatter and O. Kratky, "Small Angle X-Ray Scattering", Academic
134Press, New York, 1982
135
136http://physchem.kfunigraz.ac.at/sm/
137
138.. ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ
139
140.. _How_to_Use:
141
142How to Use
143----------
144
1451. Loading data to the panel: Open the data file from File in the menu bar.
146Select loaded data from a plot panel by highlighting that it until its color
147turns yellow. Then right click on that the data and selects the option Compute
148Invariant. The application automatically computes the invariant value if the
149data loaded is valid.
150
1512. To subtract a background or/and to rescale the data, type the values in
152Customized Input box.
153
1543. If you want to calculate the volume fraction and the specific surface
155area, type the optional inputs in the customized input box, and then press
156'Compute' button.
157
1584. The invariant can also be calculated including the outside of the data Q
159range:  To include the lower Q and/or the higher Q range, check in the enable
160extrapolation check box in 'Extrapolation' box. If the power low is chosen,
161the power (exponent) can be either held or fitted by checking the
162corresponding radio button.  The Npts that is being used for the extrapolation
163can be specified.
164
1655. If the invariant calculated from the extrapolated region is too large, it
166will be warn in red at the top of the panel, which means that your data is not
167proper to calculate the invariant.
168
1696. The details of the calculation is available by clicking the 'Details'
170button in the middle of the panel.
171
172.. image:: image005.gif
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