[c128284] | 1 | |
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| 2 | |
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[d7a39e5] | 3 | |
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| 4 | ################################################################################ |
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[78a205a] | 5 | # This software was developed by the University of Tennessee as part of the |
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| 6 | # Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 7 | # project funded by the US National Science Foundation. |
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[d7a39e5] | 8 | # |
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[78a205a] | 9 | # See the license text in license.txt |
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[d7a39e5] | 10 | # |
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[78a205a] | 11 | # copyright 2009, University of Tennessee |
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[d7a39e5] | 12 | ################################################################################ |
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[d65a00a] | 13 | |
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| 14 | |
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[4e1c362] | 15 | import sys |
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[272d91e] | 16 | import wx |
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[4e1c362] | 17 | import copy |
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[4a2b054] | 18 | import logging |
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[79492222] | 19 | from sas.guiframe.gui_manager import MDIFrame |
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| 20 | from sas.guiframe.dataFitting import Data1D |
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| 21 | from sas.guiframe.events import NewPlotEvent |
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| 22 | from sas.guiframe.events import StatusEvent |
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| 23 | from sas.guiframe.gui_style import GUIFRAME_ID |
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[b9a5f0e] | 24 | from sas.perspectives.invariant.invariant_state import Reader as reader |
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[79492222] | 25 | from sas.dataloader.loader import Loader |
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[b9a5f0e] | 26 | from sas.perspectives.invariant.invariant_panel import InvariantPanel |
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[79492222] | 27 | from sas.guiframe.plugin_base import PluginBase |
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[d65a00a] | 28 | |
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| 29 | class Plugin(PluginBase): |
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[c128284] | 30 | """ |
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[d7a39e5] | 31 | This class defines the interface for invariant Plugin class |
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[78a205a] | 32 | that can be used by the gui_manager. |
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[c128284] | 33 | """ |
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[78a205a] | 34 | |
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[c128284] | 35 | def __init__(self, standalone=False): |
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[d65a00a] | 36 | PluginBase.__init__(self, name="Invariant", standalone=standalone) |
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[78a205a] | 37 | |
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| 38 | # dictionary containing data name and error on dy of that data |
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[c128284] | 39 | self.err_dy = {} |
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[78a205a] | 40 | |
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| 41 | # default state objects |
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| 42 | self.state_reader = None |
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[35f2f49] | 43 | self._extensions = '.inv' |
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[78a205a] | 44 | self.temp_state = None |
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| 45 | self.__data = None |
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| 46 | |
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[4e1c362] | 47 | # Log startup |
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| 48 | logging.info("Invariant plug-in started") |
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[78a205a] | 49 | |
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[f29a433] | 50 | def help(self, evt): |
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| 51 | """ |
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[78a205a] | 52 | Show a general help dialog. |
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[f29a433] | 53 | """ |
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[64b4f0f] | 54 | from help_panel import HelpWindow |
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[78a205a] | 55 | frame = HelpWindow(None, -1) |
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[64b4f0f] | 56 | if hasattr(frame, "IsIconized"): |
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| 57 | if not frame.IsIconized(): |
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| 58 | try: |
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| 59 | icon = self.parent.GetIcon() |
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| 60 | frame.SetIcon(icon) |
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| 61 | except: |
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[78a205a] | 62 | logging.error(sys.exc_value) |
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[f29a433] | 63 | frame.Show(True) |
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[78a205a] | 64 | |
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[35f2f49] | 65 | def get_data(self): |
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| 66 | """ |
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| 67 | """ |
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| 68 | return self.__data |
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[78a205a] | 69 | |
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[c128284] | 70 | def get_panels(self, parent): |
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| 71 | """ |
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[d7a39e5] | 72 | Create and return the list of wx.Panels for your plug-in. |
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| 73 | Define the plug-in perspective. |
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[78a205a] | 74 | |
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[d7a39e5] | 75 | Panels should inherit from DefaultPanel defined below, |
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| 76 | or should present the same interface. They must define |
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| 77 | "window_caption" and "window_name". |
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[78a205a] | 78 | |
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[d7a39e5] | 79 | :param parent: parent window |
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[78a205a] | 80 | |
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[d7a39e5] | 81 | :return: list of panels |
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[c128284] | 82 | """ |
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[78a205a] | 83 | # # Save a reference to the parent |
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[c128284] | 84 | self.parent = parent |
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[78a205a] | 85 | self.frame = MDIFrame(self.parent, None, 'None', (100, 200)) |
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| 86 | self.invariant_panel = InvariantPanel(parent=self.frame) |
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[ae84427] | 87 | self.frame.set_panel(self.invariant_panel) |
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| 88 | self._frame_set_helper() |
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[c128284] | 89 | self.invariant_panel.set_manager(manager=self) |
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[78a205a] | 90 | self.perspective.append(self.invariant_panel.window_name) |
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| 91 | # Create reader when fitting panel are created |
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| 92 | self.state_reader = reader(self.set_state) |
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| 93 | # append that reader to list of available reader |
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[4e1c362] | 94 | loader = Loader() |
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| 95 | loader.associate_file_reader(".inv", self.state_reader) |
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[78a205a] | 96 | # loader.associate_file_reader(".svs", self.state_reader) |
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[c128284] | 97 | # Return the list of panels |
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| 98 | return [self.invariant_panel] |
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[78a205a] | 99 | |
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[a07e72f] | 100 | def get_context_menu(self, plotpanel=None): |
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[c128284] | 101 | """ |
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[d7a39e5] | 102 | This method is optional. |
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[78a205a] | 103 | |
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| 104 | When the context menu of a plot is rendered, the |
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| 105 | get_context_menu method will be called to give you a |
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[d7a39e5] | 106 | chance to add a menu item to the context menu. |
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[78a205a] | 107 | |
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[d7a39e5] | 108 | A ref to a Graph object is passed so that you can |
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| 109 | investigate the plot content and decide whether you |
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[78a205a] | 110 | need to add items to the context menu. |
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| 111 | |
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[d7a39e5] | 112 | This method returns a list of menu items. |
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[78a205a] | 113 | Each item is itself a list defining the text to |
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[d7a39e5] | 114 | appear in the menu, a tool-tip help text, and a |
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| 115 | call-back method. |
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[78a205a] | 116 | |
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[d7a39e5] | 117 | :param graph: the Graph object to which we attach the context menu |
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[78a205a] | 118 | |
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[d7a39e5] | 119 | :return: a list of menu items with call-back function |
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[c128284] | 120 | """ |
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[a07e72f] | 121 | graph = plotpanel.graph |
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[c128284] | 122 | invariant_option = "Compute invariant" |
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[4a2b054] | 123 | invariant_hint = "Will displays the invariant panel for" |
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[76e894c] | 124 | invariant_hint += " further computation" |
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[78a205a] | 125 | |
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[a07e72f] | 126 | if graph.selected_plottable not in plotpanel.plots: |
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| 127 | return [] |
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| 128 | data = plotpanel.plots[graph.selected_plottable] |
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[78a205a] | 129 | |
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[ec1584e] | 130 | if issubclass(data.__class__, Data1D): |
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[78a205a] | 131 | if data.name != "$I_{obs}(q)$" and data.name != " $P_{fit}(r)$": |
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| 132 | return [[invariant_option, invariant_hint, self._compute_invariant]] |
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[a07e72f] | 133 | return [] |
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| 134 | |
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[78a205a] | 135 | def _compute_invariant(self, event): |
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[c128284] | 136 | """ |
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[d7a39e5] | 137 | Open the invariant panel to invariant computation |
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[c128284] | 138 | """ |
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| 139 | self.panel = event.GetEventObject() |
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[4a2b054] | 140 | Plugin.on_perspective(self, event=event) |
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[a07e72f] | 141 | id = self.panel.graph.selected_plottable |
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| 142 | data = self.panel.plots[self.panel.graph.selected_plottable] |
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| 143 | if data is None: |
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| 144 | return |
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| 145 | if not issubclass(data.__class__, Data1D): |
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| 146 | name = data.__class__.__name__ |
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| 147 | msg = "Invariant use only Data1D got: [%s] " % str(name) |
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[78a205a] | 148 | raise ValueError, msg |
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[a07e72f] | 149 | self.compute_helper(data=data) |
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[78a205a] | 150 | |
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[e88ebfd] | 151 | def set_data(self, data_list=None): |
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[f1e06a8e] | 152 | """ |
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| 153 | receive a list of data and compute invariant |
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| 154 | """ |
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[9cec2dd] | 155 | msg = "" |
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[a07e72f] | 156 | data = None |
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[14cd91b1] | 157 | if data_list is None: |
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| 158 | data_list = [] |
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[e88ebfd] | 159 | if len(data_list) >= 1: |
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| 160 | if len(data_list) == 1: |
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| 161 | data = data_list[0] |
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| 162 | else: |
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[9cec2dd] | 163 | data_1d_list = [] |
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| 164 | data_2d_list = [] |
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| 165 | error_msg = "" |
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| 166 | # separate data into data1d and data2d list |
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| 167 | for data in data_list: |
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| 168 | if data is not None: |
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| 169 | if issubclass(data.__class__, Data1D): |
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| 170 | data_1d_list.append(data) |
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| 171 | else: |
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| 172 | error_msg += " %s type %s \n" % (str(data.name), |
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[78a205a] | 173 | str(data.__class__.__name__)) |
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[9cec2dd] | 174 | data_2d_list.append(data) |
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| 175 | if len(data_2d_list) > 0: |
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| 176 | msg = "Invariant does not support the following data types:\n" |
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| 177 | msg += error_msg |
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| 178 | if len(data_1d_list) == 0: |
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[78a205a] | 179 | wx.PostEvent(self.parent, StatusEvent(status=msg, info='error')) |
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[9cec2dd] | 180 | return |
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| 181 | msg += "Invariant panel does not allow multiple data!\n" |
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[e88ebfd] | 182 | msg += "Please select one.\n" |
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[6813da7d] | 183 | if len(data_list) > 1: |
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| 184 | from invariant_widgets import DataDialog |
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| 185 | dlg = DataDialog(data_list=data_1d_list, text=msg) |
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| 186 | if dlg.ShowModal() == wx.ID_OK: |
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| 187 | data = dlg.get_data() |
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| 188 | else: |
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| 189 | data = None |
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| 190 | dlg.Destroy() |
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| 191 | |
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[e88ebfd] | 192 | if data is None: |
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[9cec2dd] | 193 | msg += "invariant receives no data. \n" |
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[78a205a] | 194 | wx.PostEvent(self.parent, StatusEvent(status=msg, info='error')) |
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[e88ebfd] | 195 | return |
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[9cec2dd] | 196 | if not issubclass(data.__class__, Data1D): |
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[78a205a] | 197 | msg += "invariant cannot be computed for data of " |
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| 198 | msg += "type %s\n" % (data.__class__.__name__) |
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| 199 | wx.PostEvent(self.parent, StatusEvent(status=msg, info='error')) |
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| 200 | return |
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[9cec2dd] | 201 | else: |
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[78a205a] | 202 | wx.PostEvent(self.parent, NewPlotEvent(plot=data, title=data.title)) |
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[e88ebfd] | 203 | try: |
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| 204 | self.compute_helper(data) |
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| 205 | except: |
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[9cec2dd] | 206 | msg = "Invariant Set_data: " + str(sys.exc_value) |
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[78a205a] | 207 | wx.PostEvent(self.parent, StatusEvent(status=msg, info="error")) |
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| 208 | else: |
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[a07e72f] | 209 | msg = "invariant cannot be computed for data of " |
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| 210 | msg += "type %s" % (data.__class__.__name__) |
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[78a205a] | 211 | wx.PostEvent(self.parent, StatusEvent(status=msg, info='error')) |
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| 212 | |
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[20b482f] | 213 | def delete_data(self, data_id): |
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| 214 | """ |
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| 215 | """ |
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[b24cfd9] | 216 | if self.__data is None: |
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| 217 | return |
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[20b482f] | 218 | for id in data_id: |
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| 219 | if id == self.__data.id: |
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| 220 | self.clear_panel() |
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[78a205a] | 221 | |
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[cb69775] | 222 | def clear_panel(self): |
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[a07e72f] | 223 | """ |
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| 224 | """ |
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[cb69775] | 225 | self.invariant_panel.clear_panel() |
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[78a205a] | 226 | |
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[343fdb6] | 227 | def compute_helper(self, data): |
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| 228 | """ |
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| 229 | """ |
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| 230 | if data is None: |
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[78a205a] | 231 | return |
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[f24925ab] | 232 | # set current data if not it's a state data |
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| 233 | if not self.invariant_panel.is_state_data: |
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[9c1f463] | 234 | # Store reference to data |
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| 235 | self.__data = data |
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| 236 | # Set the data set to be user for invariant calculation |
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[210ff4f] | 237 | self.invariant_panel.set_data(data=data) |
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[78a205a] | 238 | |
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[4e1c362] | 239 | def save_file(self, filepath, state=None): |
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| 240 | """ |
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| 241 | Save data in provided state object. |
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[78a205a] | 242 | |
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[4e1c362] | 243 | :param filepath: path of file to write to |
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[78a205a] | 244 | :param state: invariant state |
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| 245 | """ |
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[4e1c362] | 246 | # Write the state to file |
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| 247 | # First, check that the data is of the right type |
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| 248 | current_plottable = self.__data |
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| 249 | |
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[d4d78c9] | 250 | if issubclass(current_plottable.__class__, Data1D): |
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[4e1c362] | 251 | self.state_reader.write(filepath, current_plottable, state) |
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| 252 | else: |
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[4a2b054] | 253 | msg = "invariant.save_file: the data being saved is" |
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[78a205a] | 254 | msg += " not a sas.dataloader.data_info.Data1D object" |
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[4a2b054] | 255 | raise RuntimeError, msg |
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[4e1c362] | 256 | |
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[78a205a] | 257 | def set_state(self, state=None, datainfo=None): |
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[4e1c362] | 258 | """ |
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| 259 | Call-back method for the state reader. |
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[9b18735] | 260 | This method is called when a .inv/.svs file is loaded. |
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[78a205a] | 261 | |
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[4e1c362] | 262 | :param state: State object |
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| 263 | """ |
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[4da35bc] | 264 | self.temp_state = None |
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[4e1c362] | 265 | try: |
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[75fbd17] | 266 | if datainfo.__class__.__name__ == 'list': |
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| 267 | data = datainfo[0] |
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[cb69775] | 268 | else: |
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| 269 | data = datainfo |
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[75fbd17] | 270 | if data is None: |
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[4a2b054] | 271 | msg = "invariant.set_state: datainfo parameter cannot" |
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| 272 | msg += " be None in standalone mode" |
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| 273 | raise RuntimeError, msg |
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[04295ea] | 274 | # Make sure the user sees the invariant panel after loading |
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[78a205a] | 275 | # self.parent.set_perspective(self.perspective) |
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[04295ea] | 276 | self.on_perspective(event=None) |
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[75fbd17] | 277 | name = data.meta_data['invstate'].file |
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| 278 | data.meta_data['invstate'].file = name |
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| 279 | data.name = name |
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| 280 | data.filename = name |
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[04295ea] | 281 | |
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[78a205a] | 282 | data = self.parent.create_gui_data(data, None) |
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[75fbd17] | 283 | self.__data = data |
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| 284 | wx.PostEvent(self.parent, NewPlotEvent(plot=self.__data, |
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[78a205a] | 285 | reset=True, title=self.__data.title)) |
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[2f97794] | 286 | data_dict = {self.__data.id:self.__data} |
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| 287 | self.parent.add_data(data_list=data_dict) |
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[f24925ab] | 288 | # set state |
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| 289 | self.invariant_panel.is_state_data = True |
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[78a205a] | 290 | |
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[9b18735] | 291 | # Load the invariant states |
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[cb69775] | 292 | self.temp_state = state |
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[04295ea] | 293 | # Requires to have self.__data and self.temp_state first. |
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| 294 | self.on_set_state_helper(None) |
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[cefb3fb] | 295 | |
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[78a205a] | 296 | except: |
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[4e1c362] | 297 | logging.error("invariant.set_state: %s" % sys.exc_value) |
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[78a205a] | 298 | |
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[9b18735] | 299 | def on_set_state_helper(self, event=None): |
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[4da35bc] | 300 | """ |
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[9b18735] | 301 | Set the state when called by EVT_STATE_UPDATE event from guiframe |
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[78a205a] | 302 | after a .inv/.svs file is loaded |
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[4da35bc] | 303 | """ |
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[4a2b054] | 304 | self.invariant_panel.set_state(state=self.temp_state, |
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| 305 | data=self.__data) |
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[4da35bc] | 306 | self.temp_state = None |
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[78a205a] | 307 | |
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| 308 | |
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[2661d8b] | 309 | def plot_theory(self, data=None, name=None): |
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[c128284] | 310 | """ |
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[d7a39e5] | 311 | Receive a data set and post a NewPlotEvent to parent. |
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[78a205a] | 312 | |
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[d7a39e5] | 313 | :param data: extrapolated data to be plotted |
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| 314 | :param name: Data's name to use for the legend |
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[c128284] | 315 | """ |
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[78a205a] | 316 | # import copy |
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[2661d8b] | 317 | if data is None: |
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[a07e72f] | 318 | id = str(self.__data.id) + name |
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[e88ebfd] | 319 | group_id = self.__data.group_id |
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[78a205a] | 320 | wx.PostEvent(self.parent, NewPlotEvent(id=id, group_id=group_id, action='Remove')) |
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[a07e72f] | 321 | return |
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[78a205a] | 322 | |
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[a07e72f] | 323 | new_plot = Data1D(x=[], y=[], dy=None) |
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| 324 | new_plot.symbol = GUIFRAME_ID.CURVE_SYMBOL_NUM |
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| 325 | scale = self.invariant_panel.get_scale() |
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| 326 | background = self.invariant_panel.get_background() |
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[78a205a] | 327 | |
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[a07e72f] | 328 | if scale != 0: |
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| 329 | # Put back the sacle and bkg for plotting |
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[78a205a] | 330 | data.y = (data.y + background) / scale |
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[a07e72f] | 331 | new_plot = Data1D(x=data.x, y=data.y, dy=None) |
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| 332 | new_plot.symbol = GUIFRAME_ID.CURVE_SYMBOL_NUM |
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[2661d8b] | 333 | else: |
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[a07e72f] | 334 | msg = "Scale can not be zero." |
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| 335 | raise ValueError, msg |
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[78a205a] | 336 | if len(new_plot.x) == 0: |
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[a07e72f] | 337 | return |
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[78a205a] | 338 | |
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[c128284] | 339 | new_plot.name = name |
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[2661d8b] | 340 | new_plot.xaxis(self.__data._xaxis, self.__data._xunit) |
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| 341 | new_plot.yaxis(self.__data._yaxis, self.__data._yunit) |
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| 342 | new_plot.group_id = self.__data.group_id |
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[a07e72f] | 343 | new_plot.id = str(self.__data.id) + name |
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[f1e06a8e] | 344 | new_plot.title = self.__data.title |
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[4e1c362] | 345 | # Save theory_data in a state |
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| 346 | if data != None: |
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| 347 | name_head = name.split('-') |
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[4a2b054] | 348 | if name_head[0] == 'Low': |
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[4e1c362] | 349 | self.invariant_panel.state.theory_lowQ = copy.deepcopy(new_plot) |
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[4a2b054] | 350 | elif name_head[0] == 'High': |
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[78a205a] | 351 | self.invariant_panel.state.theory_highQ = copy.deepcopy(new_plot) |
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| 352 | |
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[27f4bee] | 353 | self.parent.update_theory(data_id=self.__data.id, theory=new_plot) |
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[4a2b054] | 354 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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[f1e06a8e] | 355 | title=self.__data.title)) |
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[78a205a] | 356 | |
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[18d0bba] | 357 | def plot_data(self, scale, background): |
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[6d55d81] | 358 | """ |
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[d7a39e5] | 359 | replot the current data if the user enters a new scale or background |
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[6d55d81] | 360 | """ |
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[18d0bba] | 361 | new_plot = scale * self.__data - background |
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| 362 | new_plot.name = self.__data.name |
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| 363 | new_plot.group_id = self.__data.group_id |
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[78a205a] | 364 | new_plot.id = self.__data.id |
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[f1e06a8e] | 365 | new_plot.title = self.__data.title |
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[78a205a] | 366 | |
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| 367 | # Save data in a state: but seems to never happen |
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[4e1c362] | 368 | if new_plot != None: |
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| 369 | self.invariant_panel.state.data = copy.deepcopy(new_plot) |
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[4a2b054] | 370 | wx.PostEvent(self.parent, NewPlotEvent(plot=new_plot, |
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[f1e06a8e] | 371 | title=new_plot.title)) |
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[78a205a] | 372 | |
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