[230f479] | 1 | |
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| 2 | /* |
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| 3 | This software was developed by the University of Tennessee as part of the |
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| 4 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 5 | project funded by the US National Science Foundation. |
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| 6 | |
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| 7 | If you use DANSE applications to do scientific research that leads to |
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| 8 | publication, we ask that you acknowledge the use of the software with the |
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| 9 | following sentence: |
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| 10 | |
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| 11 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
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| 12 | |
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| 13 | copyright 2008, University of Tennessee |
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| 14 | |
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| 15 | See Schmidt, J Appl Cryst, 24, (1991), 414-435, Eqn (19) |
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| 16 | See Hurd, Schaefer & Martin, 35, (1987), 2361-2364 |
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| 17 | |
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| 18 | Ported to C++ from Fortran by Robert Whitley (2012) |
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| 19 | */ |
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| 20 | |
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| 21 | #include <math.h> |
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| 22 | #include "parameters.hh" |
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| 23 | #include <stdio.h> |
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| 24 | #include "FractalQtoN.h" |
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| 25 | using namespace std; |
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| 26 | |
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| 27 | FractalO_Z::FractalO_Z() |
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| 28 | { |
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| 29 | scale = Parameter(10000.0, true); |
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| 30 | m_fractal = Parameter(1.8); |
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| 31 | cluster_rg = Parameter(3250.0); |
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| 32 | s_fractal = Parameter(2.5); |
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| 33 | primary_rg = Parameter(82.0); |
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| 34 | background = Parameter(0.01); |
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| 35 | } |
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| 36 | |
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| 37 | double FractalO_Z :: operator()(double q) |
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| 38 | { |
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| 39 | double dp[3]; |
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| 40 | dp[0] = m_fractal(); |
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| 41 | dp[1] = s_fractal(); |
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| 42 | |
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| 43 | |
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| 44 | if (dp[0] <= 0) |
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| 45 | { |
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| 46 | //std::cout << "\n\nThe mass fractal dimension must be > 0!"; |
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| 47 | //std::cout << "\nWill set to 3."; |
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| 48 | dp[0] = 3.0; |
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| 49 | } |
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| 50 | else |
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| 51 | { |
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| 52 | if (dp[0] > 6) |
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| 53 | { |
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| 54 | //std::cout << "\n\nThe mass fractal dimension must be <= 6!"; |
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| 55 | //std::cout << "\nWill be set to 3."; |
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| 56 | dp[0] = 3.0; |
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| 57 | } |
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| 58 | } |
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| 59 | |
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| 60 | if (dp[1] <= 0) |
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| 61 | { |
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| 62 | //std::cout << "\n\nThe surface dimension must be > 0!"; |
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| 63 | //std::cout << "\nWill be set to 2."; |
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| 64 | dp[1] = 2.0; |
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| 65 | } |
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| 66 | else |
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| 67 | { |
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| 68 | if (dp[1] > 6) |
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| 69 | { |
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| 70 | //std::cout << "\n\nThe surface dimension must be <= 6!"; |
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| 71 | //std::cout << "\nWill be set to 2."; |
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| 72 | dp[1] = 2.0; |
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| 73 | } |
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| 74 | } |
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| 75 | |
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| 76 | double a(dp[0]/2.0); |
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| 77 | double b((cluster_rg() * cluster_rg())/(3.0*a) ); |
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| 78 | |
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| 79 | // If C goes negative, it will crash with undefined exponentiation. |
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| 80 | // So (Ds + Dm) <= 6 |
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| 81 | // c = ((ds-6.0)/-2.0)-a |
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| 82 | if ((dp[1] > (6.0-dp[0])) && (primary_rg() > 0.0)) |
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| 83 | { |
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| 84 | dp[1] = 6.0 - dp[0]; |
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| 85 | //std::cout << "\n\nThe surface fractal dimension must be <= (6-Dm)!\n"; |
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| 86 | //std::cout << setprecision(5) << fixed << dp[1]; |
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| 87 | } |
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| 88 | |
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| 89 | // c = (ds -6.0 + dm)/-2.0; |
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| 90 | double c = (6.0 - dp[1] - dp[0])/2.0; |
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| 91 | double d(0.0); |
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| 92 | |
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| 93 | // If c = 0 then it will crash with a floating divide by zero. |
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| 94 | if (c == 0) |
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| 95 | { |
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| 96 | d = 1.0e+37; |
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| 97 | } |
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| 98 | else |
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| 99 | { |
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| 100 | d = (primary_rg() * primary_rg()) / (3.0 * c); |
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| 101 | } |
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| 102 | |
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| 103 | double eVar = q*q*b; |
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| 104 | double fVar = q*q*d; |
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| 105 | double g = pow((1.0+eVar),a); |
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| 106 | double h = pow((1.0+fVar),c); |
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| 107 | double i = g*h; |
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| 108 | double result((scale()/i) + background() ); |
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| 109 | return result; |
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| 110 | } |
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| 111 | |
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| 112 | |
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| 113 | /** |
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| 114 | * Function to evaluate 2D scattering function |
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| 115 | * @param q_x: value of Q along x |
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| 116 | * @param q_y: value of Q along y |
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| 117 | * @return: function value |
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| 118 | */ |
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| 119 | double FractalO_Z :: operator()(double qx, double qy) { |
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| 120 | double q = sqrt(qx*qx + qy*qy); |
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| 121 | return (*this).operator()(q); |
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| 122 | } |
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| 123 | |
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| 124 | /** |
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| 125 | * Function to evaluate 2D scattering function |
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| 126 | * @param pars: parameters of the cylinder |
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| 127 | * @param q: q-value |
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| 128 | * @param phi: angle phi |
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| 129 | * @return: function value |
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| 130 | */ |
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| 131 | double FractalO_Z :: evaluate_rphi(double q, double phi) { |
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| 132 | double qx = q*cos(phi); |
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| 133 | double qy = q*sin(phi); |
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| 134 | return (*this).operator()(qx, qy); |
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| 135 | } |
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| 136 | /** |
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| 137 | * Function to calculate effective radius |
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| 138 | * @return: effective radius value |
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| 139 | */ |
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| 140 | double FractalO_Z :: calculate_ER() { |
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| 141 | //NOT implemented yet!!! |
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| 142 | return 0.0; |
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| 143 | } |
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| 144 | double FractalO_Z :: calculate_VR() { |
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| 145 | return 1.0; |
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| 146 | } |
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