[829eee9] | 1 | """ |
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[3db3895] | 2 | Provide F(x) = 2( exp(-x) + x - 1 )/x**2 |
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| 3 | with x = (q*R_g)**2 |
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| 4 | |
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[829eee9] | 5 | Debye function as a BaseComponent model |
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| 6 | """ |
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[79492222] | 7 | from sas.models.BaseComponent import BaseComponent |
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[829eee9] | 8 | import math |
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| 9 | |
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| 10 | class DebyeModel(BaseComponent): |
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| 11 | """ |
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| 12 | Class that evaluates a Debye model. |
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| 13 | |
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[3db3895] | 14 | F(x) = 2( exp(-x) + x - 1 )/x**2 |
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| 15 | with x = (q*R_g)**2 |
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[829eee9] | 16 | |
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| 17 | The model has three parameters: |
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| 18 | Rg = radius of gyration |
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| 19 | scale = scale factor |
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| 20 | bkd = Constant background |
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| 21 | """ |
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| 22 | |
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| 23 | def __init__(self): |
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| 24 | """ Initialization """ |
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| 25 | |
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| 26 | # Initialize BaseComponent first, then sphere |
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| 27 | BaseComponent.__init__(self) |
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| 28 | |
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| 29 | ## Name of the model |
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| 30 | self.name = "Debye" |
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[279e371] | 31 | self.description = """ |
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[96672c0] | 32 | F(x) = 2( exp(-x) + x - 1 )/x**2 |
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| 33 | with x = (q*R_g)**2 |
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[1ed3834] | 34 | |
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[96672c0] | 35 | The model has three parameters: |
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| 36 | Rg = radius of gyration |
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| 37 | scale = scale factor |
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| 38 | bkd = Constant background |
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| 39 | """ |
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[829eee9] | 40 | ## Define parameters |
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| 41 | self.params = {} |
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[3db3895] | 42 | self.params['rg'] = 50.0 |
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| 43 | self.params['scale'] = 1.0 |
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| 44 | self.params['background'] = 0.0 |
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[829eee9] | 45 | |
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| 46 | ## Parameter details [units, min, max] |
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| 47 | self.details = {} |
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[1ed3834] | 48 | self.details['rg'] = ['[A]', None, None] |
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[3db3895] | 49 | self.details['scale'] = ['', None, None] |
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[0824909] | 50 | self.details['background'] = ['[1/cm]', None, None] |
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[988130c6] | 51 | #list of parameter that cannot be fitted |
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[279e371] | 52 | self.fixed = [] |
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| 53 | |
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[829eee9] | 54 | def _debye(self, x): |
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| 55 | """ |
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| 56 | Evaluate F(x)= scale * D + bkd |
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| 57 | has 2 internal parameters : |
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[3db3895] | 58 | D = 2 * (exp(-y) + y - 1)/y**2 |
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[829eee9] | 59 | y = (x * Rg)^(2) |
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| 60 | """ |
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[3db3895] | 61 | # Note that a zero denominator value will raise |
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| 62 | # an exception |
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[f629e346] | 63 | y = (x * self.params['rg'])**2.0 |
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[26e4a24] | 64 | if x == 0: |
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[279e371] | 65 | D = 1 |
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[d37ba31] | 66 | else: |
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[279e371] | 67 | D = 2.0*( math.exp(-y) + y -1.0 )/y**2.0 |
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| 68 | return self.params['scale'] * D + self.params['background'] |
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[829eee9] | 69 | |
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| 70 | def run(self, x = 0.0): |
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| 71 | """ Evaluate the model |
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[3db3895] | 72 | @param x: input q-value (float or [float, float] as [r, theta]) |
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[829eee9] | 73 | @return: (debye value) |
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| 74 | """ |
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| 75 | if x.__class__.__name__ == 'list': |
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[a55fac1] | 76 | return self._debye(x[0]) |
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[829eee9] | 77 | elif x.__class__.__name__ == 'tuple': |
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[279e371] | 78 | raise ValueError, "Tuples are not allowed as input to models" |
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[829eee9] | 79 | else: |
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| 80 | return self._debye(x) |
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| 81 | |
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| 82 | def runXY(self, x = 0.0): |
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| 83 | """ Evaluate the model |
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[3db3895] | 84 | @param x: input q-value (float or [float, float] as [qx, qy]) |
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[829eee9] | 85 | @return: debye value |
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| 86 | """ |
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| 87 | if x.__class__.__name__ == 'list': |
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[a55fac1] | 88 | q = math.sqrt(x[0]**2 + x[1]**2) |
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| 89 | return self._debye(q) |
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[829eee9] | 90 | elif x.__class__.__name__ == 'tuple': |
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[279e371] | 91 | raise ValueError, "Tuples are not allowed as input to models" |
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[829eee9] | 92 | else: |
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| 93 | return self._debye(x) |
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