source: sasview/src/sans/models/SphereModel.py @ 81b524f

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Last change on this file since 81b524f was 81b524f, checked in by Jeff Krzywon <jeffery.krzywon@…>, 11 years ago

This branch is now merged with the latest trunk release. I will merge them next.

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File size: 6.9 KB
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[81b524f]1##############################################################################
2# This software was developed by the University of Tennessee as part of the
3# Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
4# project funded by the US National Science Foundation.
5#
6# If you use DANSE applications to do scientific research that leads to
7# publication, we ask that you acknowledge the use of the software with the
8# following sentence:
9#
10# This work benefited from DANSE software developed under NSF award DMR-0520547
11#
12# Copyright 2008-2011, University of Tennessee
13##############################################################################
14
15"""
16Provide functionality for a C extension model
17
18:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19         DO NOT MODIFY THIS FILE, MODIFY
20            src\sans\models\include\sphere.h
21         AND RE-RUN THE GENERATOR SCRIPT
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans.models.sans_extension.c_models import CSphereModel
26
27def create_SphereModel():
28    """
29       Create a model instance
30    """
31    obj = SphereModel()
32    # CSphereModel.__init__(obj) is called by
33    # the SphereModel constructor
34    return obj
35
36class SphereModel(CSphereModel, BaseComponent):
37    """
38    Class that evaluates a SphereModel model.
39    This file was auto-generated from src\sans\models\include\sphere.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
43         scale           = 1.0
44         radius          = 60.0 [A]
45         sldSph          = 2e-06 [1/A^(2)]
46         sldSolv         = 1e-06 [1/A^(2)]
47         background      = 0.0 [1/cm]
48         M0_sld_sph      = 0.0 [1/A^(2)]
49         M_theta_sph     = 0.0 [deg]
50         M_phi_sph       = 0.0 [deg]
51         M0_sld_solv     = 0.0 [1/A^(2)]
52         M_theta_solv    = 0.0 [deg]
53         M_phi_solv      = 0.0 [deg]
54         Up_frac_i       = 0.5 [u/(u+d)]
55         Up_frac_f       = 0.5 [u/(u+d)]
56         Up_theta        = 0.0 [deg]
57
58    """
59       
60    def __init__(self, multfactor=1):
61        """ Initialization """
62        self.__dict__ = {}
63       
64        # Initialize BaseComponent first, then sphere
65        BaseComponent.__init__(self)
66        #apply(CSphereModel.__init__, (self,))
67
68        CSphereModel.__init__(self)
69        self.is_multifunc = False
70                       
71        ## Name of the model
72        self.name = "SphereModel"
73        ## Model description
74        self.description = """
75        P(q)=(scale/V)*[3V(sldSph-sldSolv)*(sin(qR)-qRcos(qR))
76                /(qR)^3]^(2)+bkg
77               
78                bkg:background, R: radius of sphere
79                V:The volume of the scatter
80                sldSph: the SLD of the sphere
81                sldSolv: the SLD of the solvent
82               
83        """
84       
85        ## Parameter details [units, min, max]
86        self.details = {}
87        self.details['scale'] = ['', None, None]
88        self.details['radius'] = ['[A]', None, None]
89        self.details['sldSph'] = ['[1/A^(2)]', None, None]
90        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
91        self.details['background'] = ['[1/cm]', None, None]
92        self.details['M0_sld_sph'] = ['[1/A^(2)]', None, None]
93        self.details['M_theta_sph'] = ['[deg]', None, None]
94        self.details['M_phi_sph'] = ['[deg]', None, None]
95        self.details['M0_sld_solv'] = ['[1/A^(2)]', None, None]
96        self.details['M_theta_solv'] = ['[deg]', None, None]
97        self.details['M_phi_solv'] = ['[deg]', None, None]
98        self.details['Up_frac_i'] = ['[u/(u+d)]', None, None]
99        self.details['Up_frac_f'] = ['[u/(u+d)]', None, None]
100        self.details['Up_theta'] = ['[deg]', None, None]
101
102        ## fittable parameters
103        self.fixed = ['radius.width']
104       
105        ## non-fittable parameters
106        self.non_fittable = []
107       
108        ## parameters with orientation
109        self.orientation_params = ['M0_sld_sph',
110                                   'M_theta_sph',
111                                   'M_phi_sph',
112                                   'M0_sld_solv',
113                                   'M_theta_solv',
114                                   'M_phi_solv',
115                                   'Up_frac_i',
116                                   'Up_frac_f',
117                                   'Up_theta']
118
119        ## parameters with magnetism
120        self.magnetic_params = ['M0_sld_sph', 'M_theta_sph', 'M_phi_sph', 'M0_sld_solv', 'M_theta_solv', 'M_phi_solv', 'Up_frac_i', 'Up_frac_f', 'Up_theta']
121
122        self.category = "Shapes & Spheres"
123        self.multiplicity_info = None
124       
125    def __setstate__(self, state):
126        """
127        restore the state of a model from pickle
128        """
129        self.__dict__, self.params, self.dispersion = state
130       
131    def __reduce_ex__(self, proto):
132        """
133        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
134        c model.
135        """
136        state = (self.__dict__, self.params, self.dispersion)
137        return (create_SphereModel, tuple(), state, None, None)
138       
139    def clone(self):
140        """ Return a identical copy of self """
141        return self._clone(SphereModel())   
142       
143    def run(self, x=0.0):
144        """
145        Evaluate the model
146       
147        :param x: input q, or [q,phi]
148       
149        :return: scattering function P(q)
150       
151        """
152        return CSphereModel.run(self, x)
153   
154    def runXY(self, x=0.0):
155        """
156        Evaluate the model in cartesian coordinates
157       
158        :param x: input q, or [qx, qy]
159       
160        :return: scattering function P(q)
161       
162        """
163        return CSphereModel.runXY(self, x)
164       
165    def evalDistribution(self, x):
166        """
167        Evaluate the model in cartesian coordinates
168       
169        :param x: input q[], or [qx[], qy[]]
170       
171        :return: scattering function P(q[])
172       
173        """
174        return CSphereModel.evalDistribution(self, x)
175       
176    def calculate_ER(self):
177        """
178        Calculate the effective radius for P(q)*S(q)
179       
180        :return: the value of the effective radius
181       
182        """       
183        return CSphereModel.calculate_ER(self)
184       
185    def calculate_VR(self):
186        """
187        Calculate the volf ratio for P(q)*S(q)
188       
189        :return: the value of the volf ratio
190       
191        """       
192        return CSphereModel.calculate_VR(self)
193             
194    def set_dispersion(self, parameter, dispersion):
195        """
196        Set the dispersion object for a model parameter
197       
198        :param parameter: name of the parameter [string]
199        :param dispersion: dispersion object of type DispersionModel
200       
201        """
202        return CSphereModel.set_dispersion(self,
203               parameter, dispersion.cdisp)
204       
205   
206# End of file
207
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