source: sasview/src/sans/models/MassFractalModel.py @ 81b524f

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Last change on this file since 81b524f was 81b524f, checked in by Jeff Krzywon <jeffery.krzywon@…>, 11 years ago

This branch is now merged with the latest trunk release. I will merge them next.

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1##############################################################################
2# This software was developed by the University of Tennessee as part of the
3# Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
4# project funded by the US National Science Foundation.
5#
6# If you use DANSE applications to do scientific research that leads to
7# publication, we ask that you acknowledge the use of the software with the
8# following sentence:
9#
10# This work benefited from DANSE software developed under NSF award DMR-0520547
11#
12# Copyright 2008-2011, University of Tennessee
13##############################################################################
14
15"""
16Provide functionality for a C extension model
17
18:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19         DO NOT MODIFY THIS FILE, MODIFY
20            src\sans\models\include\massfractal.h
21         AND RE-RUN THE GENERATOR SCRIPT
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans.models.sans_extension.c_models import CMassFractalModel
26
27def create_MassFractalModel():
28    """
29       Create a model instance
30    """
31    obj = MassFractalModel()
32    # CMassFractalModel.__init__(obj) is called by
33    # the MassFractalModel constructor
34    return obj
35
36class MassFractalModel(CMassFractalModel, BaseComponent):
37    """
38    Class that evaluates a MassFractalModel model.
39    This file was auto-generated from src\sans\models\include\massfractal.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
43         scale           = 1.0
44         radius          = 10.0 [A]
45         mass_dim        = 1.9
46         co_length       = 100.0 [A]
47         background      = 0.0
48
49    """
50       
51    def __init__(self, multfactor=1):
52        """ Initialization """
53        self.__dict__ = {}
54       
55        # Initialize BaseComponent first, then sphere
56        BaseComponent.__init__(self)
57        #apply(CMassFractalModel.__init__, (self,))
58
59        CMassFractalModel.__init__(self)
60        self.is_multifunc = False
61                       
62        ## Name of the model
63        self.name = "MassFractalModel"
64        ## Model description
65        self.description = """
66         The scattering intensity  I(x) = scale*P(x)*S(x) + background, where
67                scale = scale_factor  * V * delta^(2)
68                p(x)=  F(x*radius)^(2)
69                F(x) = 3*[sin(x)-x cos(x)]/x**3
70                S(x) = [(gamma(Dm-1)*colength^(Dm-1)*[1+(x^2*colength^2)]^((1-Dm)/2)
71                * sin[(Dm-1)*arctan(x*colength)])/x]
72                where delta = sldParticle -sldSolv.
73                radius       =  Particle radius
74                mass_dim  =  Mass fractal dimension
75                co_length  =  Cut-off length
76                background   =  background
77                Ref.:Mildner, Hall,J Phys D Appl Phys(1986), 9, 1535-1545
78                Note I: This model is valid for 1<mass_dim<6.
79                Note II: This model is not in absolute scale.
80        """
81       
82        ## Parameter details [units, min, max]
83        self.details = {}
84        self.details['scale'] = ['', None, None]
85        self.details['radius'] = ['[A]', None, None]
86        self.details['mass_dim'] = ['', None, None]
87        self.details['co_length'] = ['[A]', None, None]
88        self.details['background'] = ['', None, None]
89
90        ## fittable parameters
91        self.fixed = []
92       
93        ## non-fittable parameters
94        self.non_fittable = []
95       
96        ## parameters with orientation
97        self.orientation_params = []
98
99        ## parameters with magnetism
100        self.magnetic_params = []
101
102        self.category = None
103        self.multiplicity_info = None
104       
105    def __setstate__(self, state):
106        """
107        restore the state of a model from pickle
108        """
109        self.__dict__, self.params, self.dispersion = state
110       
111    def __reduce_ex__(self, proto):
112        """
113        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
114        c model.
115        """
116        state = (self.__dict__, self.params, self.dispersion)
117        return (create_MassFractalModel, tuple(), state, None, None)
118       
119    def clone(self):
120        """ Return a identical copy of self """
121        return self._clone(MassFractalModel())   
122       
123    def run(self, x=0.0):
124        """
125        Evaluate the model
126       
127        :param x: input q, or [q,phi]
128       
129        :return: scattering function P(q)
130       
131        """
132        return CMassFractalModel.run(self, x)
133   
134    def runXY(self, x=0.0):
135        """
136        Evaluate the model in cartesian coordinates
137       
138        :param x: input q, or [qx, qy]
139       
140        :return: scattering function P(q)
141       
142        """
143        return CMassFractalModel.runXY(self, x)
144       
145    def evalDistribution(self, x):
146        """
147        Evaluate the model in cartesian coordinates
148       
149        :param x: input q[], or [qx[], qy[]]
150       
151        :return: scattering function P(q[])
152       
153        """
154        return CMassFractalModel.evalDistribution(self, x)
155       
156    def calculate_ER(self):
157        """
158        Calculate the effective radius for P(q)*S(q)
159       
160        :return: the value of the effective radius
161       
162        """       
163        return CMassFractalModel.calculate_ER(self)
164       
165    def calculate_VR(self):
166        """
167        Calculate the volf ratio for P(q)*S(q)
168       
169        :return: the value of the volf ratio
170       
171        """       
172        return CMassFractalModel.calculate_VR(self)
173             
174    def set_dispersion(self, parameter, dispersion):
175        """
176        Set the dispersion object for a model parameter
177       
178        :param parameter: name of the parameter [string]
179        :param dispersion: dispersion object of type DispersionModel
180       
181        """
182        return CMassFractalModel.set_dispersion(self,
183               parameter, dispersion.cdisp)
184       
185   
186# End of file
187
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