source: sasview/src/sans/models/FCCrystalModel.py @ 81b524f

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Last change on this file since 81b524f was 81b524f, checked in by Jeff Krzywon <jeffery.krzywon@…>, 11 years ago

This branch is now merged with the latest trunk release. I will merge them next.

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File size: 6.7 KB
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1##############################################################################
2# This software was developed by the University of Tennessee as part of the
3# Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
4# project funded by the US National Science Foundation.
5#
6# If you use DANSE applications to do scientific research that leads to
7# publication, we ask that you acknowledge the use of the software with the
8# following sentence:
9#
10# This work benefited from DANSE software developed under NSF award DMR-0520547
11#
12# Copyright 2008-2011, University of Tennessee
13##############################################################################
14
15"""
16Provide functionality for a C extension model
17
18:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19         DO NOT MODIFY THIS FILE, MODIFY
20            src\sans\models\include\fcc.h
21         AND RE-RUN THE GENERATOR SCRIPT
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans.models.sans_extension.c_models import CFCCrystalModel
26
27def create_FCCrystalModel():
28    """
29       Create a model instance
30    """
31    obj = FCCrystalModel()
32    # CFCCrystalModel.__init__(obj) is called by
33    # the FCCrystalModel constructor
34    return obj
35
36class FCCrystalModel(CFCCrystalModel, BaseComponent):
37    """
38    Class that evaluates a FCCrystalModel model.
39    This file was auto-generated from src\sans\models\include\fcc.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
43         scale           = 1.0
44         dnn             = 220.0 [A]
45         d_factor        = 0.06
46         radius          = 40.0 [A]
47         sldSph          = 3e-06 [1/A^(2)]
48         sldSolv         = 6.3e-06 [1/A^(2)]
49         background      = 0.0 [1/cm]
50         theta           = 0.0 [deg]
51         phi             = 0.0 [deg]
52         psi             = 0.0 [deg]
53
54    """
55       
56    def __init__(self, multfactor=1):
57        """ Initialization """
58        self.__dict__ = {}
59       
60        # Initialize BaseComponent first, then sphere
61        BaseComponent.__init__(self)
62        #apply(CFCCrystalModel.__init__, (self,))
63
64        CFCCrystalModel.__init__(self)
65        self.is_multifunc = False
66                       
67        ## Name of the model
68        self.name = "FCCrystalModel"
69        ## Model description
70        self.description = """
71        P(q)=(scale/Vp)*V_lattice*P(q)*Z(q)+bkg where scale is the volume
72                fraction of sphere,
73                Vp = volume of the primary particle,
74                V_lattice = volume correction for
75                for the crystal structure,
76                P(q)= form factor of the sphere (normalized),
77                Z(q)= paracrystalline structure factor
78                for a face centered cubic structure.
79                [Face Centered Cubic ParaCrystal Model]
80                Parameters;
81                scale: volume fraction of spheres
82                bkg:background, R: radius of sphere
83                dnn: Nearest neighbor distance
84                d_factor: Paracrystal distortion factor
85                radius: radius of the spheres
86                sldSph: SLD of the sphere
87                sldSolv: SLD of the solvent
88               
89        """
90       
91        ## Parameter details [units, min, max]
92        self.details = {}
93        self.details['scale'] = ['', None, None]
94        self.details['dnn'] = ['[A]', None, None]
95        self.details['d_factor'] = ['', None, None]
96        self.details['radius'] = ['[A]', None, None]
97        self.details['sldSph'] = ['[1/A^(2)]', None, None]
98        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
99        self.details['background'] = ['[1/cm]', None, None]
100        self.details['theta'] = ['[deg]', None, None]
101        self.details['phi'] = ['[deg]', None, None]
102        self.details['psi'] = ['[deg]', None, None]
103
104        ## fittable parameters
105        self.fixed = ['radius.width',
106                      'phi.width',
107                      'psi.width',
108                      'theta.width']
109       
110        ## non-fittable parameters
111        self.non_fittable = []
112       
113        ## parameters with orientation
114        self.orientation_params = ['phi',
115                                   'psi',
116                                   'theta',
117                                   'phi.width',
118                                   'psi.width',
119                                   'theta.width']
120
121        ## parameters with magnetism
122        self.magnetic_params = []
123
124        self.category = None
125        self.multiplicity_info = None
126       
127    def __setstate__(self, state):
128        """
129        restore the state of a model from pickle
130        """
131        self.__dict__, self.params, self.dispersion = state
132       
133    def __reduce_ex__(self, proto):
134        """
135        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
136        c model.
137        """
138        state = (self.__dict__, self.params, self.dispersion)
139        return (create_FCCrystalModel, tuple(), state, None, None)
140       
141    def clone(self):
142        """ Return a identical copy of self """
143        return self._clone(FCCrystalModel())   
144       
145    def run(self, x=0.0):
146        """
147        Evaluate the model
148       
149        :param x: input q, or [q,phi]
150       
151        :return: scattering function P(q)
152       
153        """
154        return CFCCrystalModel.run(self, x)
155   
156    def runXY(self, x=0.0):
157        """
158        Evaluate the model in cartesian coordinates
159       
160        :param x: input q, or [qx, qy]
161       
162        :return: scattering function P(q)
163       
164        """
165        return CFCCrystalModel.runXY(self, x)
166       
167    def evalDistribution(self, x):
168        """
169        Evaluate the model in cartesian coordinates
170       
171        :param x: input q[], or [qx[], qy[]]
172       
173        :return: scattering function P(q[])
174       
175        """
176        return CFCCrystalModel.evalDistribution(self, x)
177       
178    def calculate_ER(self):
179        """
180        Calculate the effective radius for P(q)*S(q)
181       
182        :return: the value of the effective radius
183       
184        """       
185        return CFCCrystalModel.calculate_ER(self)
186       
187    def calculate_VR(self):
188        """
189        Calculate the volf ratio for P(q)*S(q)
190       
191        :return: the value of the volf ratio
192       
193        """       
194        return CFCCrystalModel.calculate_VR(self)
195             
196    def set_dispersion(self, parameter, dispersion):
197        """
198        Set the dispersion object for a model parameter
199       
200        :param parameter: name of the parameter [string]
201        :param dispersion: dispersion object of type DispersionModel
202       
203        """
204        return CFCCrystalModel.set_dispersion(self,
205               parameter, dispersion.cdisp)
206       
207   
208# End of file
209
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