1 | """ |
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2 | Setup for SasView |
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3 | #TODO: Add checks to see that all the dependencies are on the system |
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4 | """ |
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5 | import sys |
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6 | import os |
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7 | from setuptools import setup, Extension |
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8 | from distutils.command.build_ext import build_ext |
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9 | from distutils.core import Command |
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10 | |
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11 | try: |
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12 | from numpy.distutils.misc_util import get_numpy_include_dirs |
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13 | NUMPY_INC = get_numpy_include_dirs()[0] |
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14 | except: |
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15 | try: |
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16 | import numpy |
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17 | NUMPY_INC = os.path.join(os.path.split(numpy.__file__)[0], |
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18 | "core","include") |
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19 | except: |
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20 | msg = "\nNumpy is needed to build SasView. " |
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21 | print msg, "Try easy_install numpy.\n %s" % str(sys.exc_value) |
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22 | sys.exit(0) |
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23 | |
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24 | # Manage version number ###################################### |
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25 | import sasview |
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26 | VERSION = sasview.__version__ |
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27 | ############################################################## |
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28 | |
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29 | package_dir = {} |
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30 | package_data = {} |
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31 | packages = [] |
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32 | ext_modules = [] |
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33 | |
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34 | # Remove all files that should be updated by this setup |
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35 | # We do this here because application updates these files from .sasview |
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36 | # except when there is no such file |
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37 | # Todo : make this list generic |
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38 | plugin_model_list = ['polynominal5.py', 'sph_bessel_jn.py', |
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39 | 'sum_Ap1_1_Ap2.py', 'sum_p1_p2.py', |
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40 | 'testmodel_2.py', 'testmodel.py', |
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41 | 'polynominal5.pyc', 'sph_bessel_jn.pyc', |
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42 | 'sum_Ap1_1_Ap2.pyc', 'sum_p1_p2.pyc', |
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43 | 'testmodel_2.pyc', 'testmodel.pyc', 'plugins.log'] |
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44 | sas_dir = os.path.join(os.path.expanduser("~"),'.sasview') |
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45 | if os.path.isdir(sas_dir): |
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46 | f_path = os.path.join(sas_dir, "sasview.log") |
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47 | if os.path.isfile(f_path): |
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48 | os.remove(f_path) |
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49 | f_path = os.path.join(sas_dir, "serialized_cat.json") |
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50 | if os.path.isfile(f_path): |
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51 | os.remove(f_path) |
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52 | f_path = os.path.join(sas_dir, 'config', "custom_config.py") |
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53 | if os.path.isfile(f_path): |
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54 | os.remove(f_path) |
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55 | f_path = os.path.join(sas_dir, 'plugin_models') |
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56 | if os.path.isdir(f_path): |
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57 | for f in os.listdir(f_path): |
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58 | if f in plugin_model_list: |
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59 | file_path = os.path.join(f_path, f) |
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60 | os.remove(file_path) |
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61 | |
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62 | # 'sys.maxsize' and 64bit: Not supported for python2.5 |
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63 | is_64bits = False |
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64 | if sys.version_info >= (2, 6): |
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65 | is_64bits = sys.maxsize > 2**32 |
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66 | |
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67 | enable_openmp = False |
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68 | |
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69 | if sys.platform =='darwin': |
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70 | if not is_64bits: |
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71 | # Disable OpenMP |
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72 | enable_openmp = False |
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73 | else: |
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74 | # Newer versions of Darwin don't support openmp |
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75 | try: |
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76 | darwin_ver = int(os.uname()[2].split('.')[0]) |
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77 | if darwin_ver >= 12: |
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78 | enable_openmp = False |
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79 | except: |
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80 | print "PROBLEM determining Darwin version" |
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81 | |
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82 | # Options to enable OpenMP |
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83 | copt = {'msvc': ['/openmp'], |
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84 | 'mingw32' : ['-fopenmp'], |
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85 | 'unix' : ['-fopenmp']} |
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86 | lopt = {'msvc': ['/MANIFEST'], |
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87 | 'mingw32' : ['-fopenmp'], |
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88 | 'unix' : ['-lgomp']} |
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89 | |
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90 | # Platform-specific link options |
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91 | platform_lopt = {'msvc' : ['/MANIFEST']} |
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92 | platform_copt = {} |
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93 | |
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94 | # Set copts to get compile working on OS X >= 10.9 using clang |
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95 | if sys.platform =='darwin': |
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96 | try: |
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97 | darwin_ver = int(os.uname()[2].split('.')[0]) |
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98 | if darwin_ver >= 13 and darwin_ver < 14: |
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99 | platform_copt = {'unix' : ['-Wno-error=unused-command-line-argument-hard-error-in-future']} |
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100 | except: |
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101 | print "PROBLEM determining Darwin version" |
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102 | |
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103 | class DisableOpenMPCommand(Command): |
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104 | description = "The version of MinGW that comes with Anaconda does not come with OpenMP :( "\ |
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105 | "This commands means we can turn off compiling with OpenMP for this or any "\ |
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106 | "other reason." |
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107 | user_options = [] |
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108 | |
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109 | def initialize_options(self): |
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110 | self.cwd = None |
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111 | |
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112 | def finalize_options(self): |
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113 | self.cwd = os.getcwd() |
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114 | global enable_openmp |
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115 | enable_openmp = False |
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116 | |
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117 | def run(self): |
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118 | pass |
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119 | |
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120 | class build_ext_subclass( build_ext ): |
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121 | def build_extensions(self): |
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122 | # Get 64-bitness |
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123 | c = self.compiler.compiler_type |
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124 | print "Compiling with %s (64bit=%s)" % (c, str(is_64bits)) |
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125 | |
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126 | # OpenMP build options |
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127 | if enable_openmp: |
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128 | if copt.has_key(c): |
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129 | for e in self.extensions: |
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130 | e.extra_compile_args = copt[ c ] |
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131 | if lopt.has_key(c): |
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132 | for e in self.extensions: |
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133 | e.extra_link_args = lopt[ c ] |
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134 | |
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135 | # Platform-specific build options |
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136 | if platform_lopt.has_key(c): |
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137 | for e in self.extensions: |
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138 | e.extra_link_args = platform_lopt[ c ] |
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139 | |
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140 | if platform_copt.has_key(c): |
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141 | for e in self.extensions: |
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142 | e.extra_compile_args = platform_copt[ c ] |
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143 | |
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144 | |
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145 | build_ext.build_extensions(self) |
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146 | |
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147 | class BuildSphinxCommand(Command): |
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148 | description = "Build Sphinx documentation." |
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149 | user_options = [] |
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150 | |
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151 | def initialize_options(self): |
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152 | self.cwd = None |
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153 | |
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154 | def finalize_options(self): |
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155 | self.cwd = os.getcwd() |
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156 | |
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157 | def run(self): |
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158 | sys.path.append("docs/sphinx-docs") |
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159 | import build_sphinx |
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160 | build_sphinx.rebuild() |
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161 | |
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162 | # sas module |
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163 | package_dir["sas"] = os.path.join("src", "sas") |
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164 | packages.append("sas") |
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165 | |
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166 | # sas module |
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167 | package_dir["sas.sasgui"] = os.path.join("src", "sas", "sasgui") |
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168 | packages.append("sas.sasgui") |
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169 | |
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170 | # sas module |
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171 | package_dir["sas.sascalc"] = os.path.join("src", "sas", "sascalc") |
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172 | packages.append("sas.sascalc") |
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173 | |
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174 | # sas.sascalc.invariant |
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175 | package_dir["sas.sascalc.invariant"] = os.path.join("src", "sas", "sascalc", "invariant") |
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176 | packages.extend(["sas.sascalc.invariant"]) |
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177 | |
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178 | # sas.sasgui.guiframe |
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179 | guiframe_path = os.path.join("src", "sas", "sasgui", "guiframe") |
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180 | package_dir["sas.sasgui.guiframe"] = guiframe_path |
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181 | package_dir["sas.sasgui.guiframe.local_perspectives"] = os.path.join(os.path.join(guiframe_path, "local_perspectives")) |
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182 | package_data["sas.sasgui.guiframe"] = ['images/*', 'media/*'] |
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183 | packages.extend(["sas.sasgui.guiframe", "sas.sasgui.guiframe.local_perspectives"]) |
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184 | # build local plugin |
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185 | for d in os.listdir(os.path.join(guiframe_path, "local_perspectives")): |
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186 | if d not in ['.svn','__init__.py', '__init__.pyc']: |
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187 | package_name = "sas.sasgui.guiframe.local_perspectives." + d |
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188 | packages.append(package_name) |
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189 | package_dir[package_name] = os.path.join(guiframe_path, "local_perspectives", d) |
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190 | |
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191 | # sas.sascalc.dataloader |
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192 | package_dir["sas.sascalc.dataloader"] = os.path.join("src", "sas", "sascalc", "dataloader") |
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193 | package_data["sas.sascalc.dataloader.readers"] = ['defaults.json','schema/*.xsd'] |
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194 | packages.extend(["sas.sascalc.dataloader","sas.sascalc.dataloader.readers","sas.sascalc.dataloader.readers.schema"]) |
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195 | |
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196 | # sas.sascalc.calculator |
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197 | package_dir["sas.sascalc.calculator"] =os.path.join("src", "sas", "sascalc", "calculator") |
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198 | packages.extend(["sas.sascalc.calculator"]) |
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199 | |
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200 | # sas.sascalc.pr |
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201 | numpy_incl_path = os.path.join(NUMPY_INC, "numpy") |
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202 | srcdir = os.path.join("src", "sas", "sascalc", "pr", "c_extensions") |
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203 | package_dir["sas.sascalc.pr.core"] = srcdir |
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204 | package_dir["sas.sascalc.pr"] = os.path.join("src","sas", "sascalc", "pr") |
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205 | packages.extend(["sas.sascalc.pr","sas.sascalc.pr.core"]) |
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206 | ext_modules.append( Extension("sas.sascalc.pr.core.pr_inversion", |
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207 | sources = [os.path.join(srcdir, "Cinvertor.c"), |
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208 | os.path.join(srcdir, "invertor.c"), |
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209 | ], |
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210 | include_dirs=[numpy_incl_path], |
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211 | ) ) |
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212 | |
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213 | # sas.sascalc.fit |
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214 | package_dir["sas.sascalc.fit"] = os.path.join("src", "sas", "sascalc", "fit") |
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215 | packages.append("sas.sascalc.fit") |
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216 | |
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217 | # Perspectives |
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218 | package_dir["sas.sasgui.perspectives"] = os.path.join("src", "sas", "sasgui", "perspectives") |
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219 | package_dir["sas.sasgui.perspectives.pr"] = os.path.join("src", "sas", "sasgui", "perspectives", "pr") |
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220 | packages.extend(["sas.sasgui.perspectives","sas.sasgui.perspectives.pr"]) |
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221 | package_data["sas.sasgui.perspectives.pr"] = ['images/*'] |
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222 | |
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223 | package_dir["sas.sasgui.perspectives.invariant"] = os.path.join("src", "sas", "sasgui", "perspectives", "invariant") |
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224 | packages.extend(["sas.sasgui.perspectives.invariant"]) |
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225 | package_data['sas.sasgui.perspectives.invariant'] = [os.path.join("media",'*')] |
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226 | |
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227 | package_dir["sas.sasgui.perspectives.fitting"] = os.path.join("src", "sas", "sasgui", "perspectives", "fitting") |
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228 | package_dir["sas.sasgui.perspectives.fitting.plugin_models"] = os.path.join("src", "sas", "sasgui", "perspectives", "fitting", "plugin_models") |
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229 | packages.extend(["sas.sasgui.perspectives.fitting", |
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230 | "sas.sasgui.perspectives.fitting.plugin_models"]) |
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231 | package_data['sas.sasgui.perspectives.fitting'] = ['media/*','plugin_models/*'] |
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232 | |
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233 | packages.extend(["sas.sasgui.perspectives", "sas.sasgui.perspectives.calculator"]) |
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234 | package_data['sas.sasgui.perspectives.calculator'] = ['images/*', 'media/*'] |
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235 | |
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236 | # Data util |
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237 | package_dir["sas.sascalc.data_util"] = os.path.join("src", "sas", "sascalc", "data_util") |
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238 | packages.append("sas.sascalc.data_util") |
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239 | |
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240 | # Plottools |
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241 | package_dir["sas.sasgui.plottools"] = os.path.join("src", "sas", "sasgui", "plottools") |
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242 | packages.append("sas.sasgui.plottools") |
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243 | |
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244 | # sas models |
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245 | includedir = os.path.join("src", "sas", "models", "include") |
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246 | igordir = os.path.join("src", "sas", "models", "c_extension", "libigor") |
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247 | cephes_dir = os.path.join("src", "sas", "models", "c_extension", "cephes") |
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248 | c_model_dir = os.path.join("src", "sas", "models", "c_extension", "c_models") |
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249 | smear_dir = os.path.join("src", "sas", "models", "c_extension", "c_smearer") |
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250 | gen_dir = os.path.join("src", "sas", "models", "c_extension", "c_gen") |
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251 | wrapper_dir = os.path.join("src", "sas", "models", "c_extension", "python_wrapper", "generated") |
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252 | model_dir = os.path.join("src", "sas","models") |
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253 | |
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254 | if os.path.isdir(wrapper_dir): |
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255 | for file in os.listdir(wrapper_dir): |
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256 | file_path = os.path.join(wrapper_dir, file) |
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257 | os.remove(file_path) |
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258 | else: |
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259 | os.makedirs(wrapper_dir) |
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260 | sys.path.append(os.path.join("src", "sas", "models", "c_extension", "python_wrapper")) |
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261 | from wrapping import generate_wrappers |
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262 | generate_wrappers(header_dir = includedir, |
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263 | output_dir = model_dir, |
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264 | c_wrapper_dir = wrapper_dir) |
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265 | |
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266 | IGNORED_FILES = [".svn"] |
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267 | if not os.name=='nt': |
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268 | IGNORED_FILES.extend(["gamma_win.c","winFuncs.c"]) |
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269 | |
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270 | EXTENSIONS = [".c", ".cpp"] |
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271 | |
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272 | def append_file(file_list, dir_path): |
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273 | """ |
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274 | Add sources file to sources |
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275 | """ |
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276 | for f in os.listdir(dir_path): |
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277 | if os.path.isfile(os.path.join(dir_path, f)): |
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278 | _, ext = os.path.splitext(f) |
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279 | if ext.lower() in EXTENSIONS and f not in IGNORED_FILES: |
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280 | file_list.append(os.path.join(dir_path, f)) |
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281 | elif os.path.isdir(os.path.join(dir_path, f)) and \ |
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282 | not f.startswith("."): |
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283 | sub_dir = os.path.join(dir_path, f) |
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284 | for new_f in os.listdir(sub_dir): |
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285 | if os.path.isfile(os.path.join(sub_dir, new_f)): |
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286 | _, ext = os.path.splitext(new_f) |
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287 | if ext.lower() in EXTENSIONS and\ |
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288 | new_f not in IGNORED_FILES: |
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289 | file_list.append(os.path.join(sub_dir, new_f)) |
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290 | |
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291 | model_sources = [] |
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292 | append_file(file_list=model_sources, dir_path=igordir) |
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293 | append_file(file_list=model_sources, dir_path=c_model_dir) |
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294 | append_file(file_list=model_sources, dir_path=wrapper_dir) |
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295 | |
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296 | smear_sources = [] |
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297 | append_file(file_list=smear_sources, dir_path=smear_dir) |
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298 | |
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299 | package_dir["sas.models"] = model_dir |
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300 | package_dir["sas.models.sas_extension"] = os.path.join("src", "sas", "models", "sas_extension") |
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301 | package_data['sas.models'] = [os.path.join('media', "*.*")] |
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302 | package_data['sas.models'] += [os.path.join('media','img', "*.*")] |
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303 | packages.extend(["sas.models","sas.models.sas_extension"]) |
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304 | |
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305 | smearer_sources = [os.path.join(smear_dir, "smearer.cpp"), |
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306 | os.path.join(smear_dir, "smearer_module.cpp")] |
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307 | geni_sources = [os.path.join(gen_dir, "sld2i_module.cpp")] |
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308 | if os.name=='nt': |
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309 | smearer_sources.append(os.path.join(igordir, "winFuncs.c")) |
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310 | geni_sources.append(os.path.join(igordir, "winFuncs.c")) |
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311 | |
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312 | c_models = [ |
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313 | Extension("sas.models.sas_extension.c_models", |
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314 | sources=model_sources, |
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315 | include_dirs=[ |
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316 | igordir, includedir, c_model_dir, numpy_incl_path, cephes_dir |
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317 | ], |
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318 | ), |
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319 | |
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320 | # Smearer extension |
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321 | Extension("sas.models.sas_extension.smearer", |
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322 | sources = smearer_sources, |
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323 | include_dirs=[igordir, smear_dir, numpy_incl_path], |
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324 | ), |
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325 | |
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326 | Extension("sas.models.sas_extension.smearer2d_helper", |
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327 | sources = [ |
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328 | os.path.join(smear_dir, "smearer2d_helper_module.cpp"), |
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329 | os.path.join(smear_dir, "smearer2d_helper.cpp"), |
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330 | os.path.join(igordir, "winFuncs.c"), |
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331 | ], |
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332 | include_dirs=[smear_dir, numpy_incl_path], |
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333 | ), |
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334 | |
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335 | Extension("sas.models.sas_extension.sld2i", |
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336 | sources = [ |
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337 | os.path.join(gen_dir, "sld2i_module.cpp"), |
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338 | os.path.join(gen_dir, "sld2i.cpp"), |
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339 | os.path.join(c_model_dir, "libfunc.c"), |
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340 | os.path.join(c_model_dir, "librefl.c"), |
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341 | os.path.join(igordir, "winFuncs.c"), |
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342 | ], |
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343 | include_dirs=[gen_dir, includedir, c_model_dir, numpy_incl_path], |
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344 | ), |
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345 | ] |
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346 | |
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347 | # Comment out the following to avoid rebuilding all the models |
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348 | ext_modules.extend(c_models) |
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349 | |
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350 | # SasView |
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351 | |
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352 | package_dir["sas.sasview"] = "sasview" |
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353 | package_data['sas.sasview'] = ['images/*', |
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354 | 'media/*', |
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355 | 'test/*.txt', |
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356 | 'test/1d_data/*', |
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357 | 'test/2d_data/*', |
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358 | 'test/save_states/*', |
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359 | 'test/upcoming_formats/*', |
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360 | 'default_categories.json'] |
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361 | packages.append("sas.sasview") |
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362 | |
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363 | required = [ |
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364 | 'bumps>=0.7.5.6', 'periodictable>=1.3.1', 'pyparsing<2.0.0', |
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365 | |
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366 | # 'lxml>=2.2.2', |
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367 | 'lxml', |
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368 | |
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369 | ## The following dependecies won't install automatically, so assume them |
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370 | ## The numbers should be bumped up for matplotlib and wxPython as well. |
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371 | # 'numpy>=1.4.1', 'scipy>=0.7.2', 'matplotlib>=0.99.1.1', |
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372 | # 'wxPython>=2.8.11', 'pil', |
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373 | ] |
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374 | |
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375 | if os.name=='nt': |
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376 | required.extend(['html5lib', 'reportlab']) |
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377 | else: |
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378 | required.extend(['pil']) |
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379 | |
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380 | # Set up SasView |
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381 | setup( |
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382 | name="sasview", |
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383 | version = VERSION, |
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384 | description = "SasView application", |
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385 | author = "SasView Team", |
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386 | author_email = "developers@sasview.org", |
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387 | url = "http://sasview.org", |
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388 | license = "PSF", |
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389 | keywords = "small-angle x-ray and neutron scattering analysis", |
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390 | download_url = "https://github.com/SasView/sasview.git", |
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391 | package_dir = package_dir, |
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392 | packages = packages, |
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393 | package_data = package_data, |
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394 | ext_modules = ext_modules, |
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395 | install_requires = required, |
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396 | zip_safe = False, |
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397 | entry_points = { |
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398 | 'console_scripts':[ |
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399 | "sasview = sas.sasview.sasview:run", |
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400 | ] |
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401 | }, |
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402 | cmdclass = {'build_ext': build_ext_subclass, |
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403 | 'docs': BuildSphinxCommand, |
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404 | 'disable_openmp': DisableOpenMPCommand} |
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405 | ) |
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