source: sasview/setup.py @ 3a39c2e

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload
Last change on this file since 3a39c2e was 3a39c2e, checked in by krzywon, 5 years ago

Next iteration of the SANS→SAS is complete.

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1"""
2    Setup for SasView
3    #TODO: Add checks to see that all the dependencies are on the system
4"""
5import sys
6import os
7from setuptools import setup, Extension
8from distutils.command.build_ext import build_ext
9from distutils.core import Command
10
11sys.path.append("docs/sphinx-docs")
12import build_sphinx
13
14try:
15    from numpy.distutils.misc_util import get_numpy_include_dirs
16    NUMPY_INC = get_numpy_include_dirs()[0]
17except:
18    try:
19        import numpy
20        NUMPY_INC = os.path.join(os.path.split(numpy.__file__)[0], 
21                                 "core","include")
22    except:
23        msg = "\nNumpy is needed to build SasView. "
24        print msg, "Try easy_install numpy.\n  %s" % str(sys.exc_value)
25        sys.exit(0)
26
27# Manage version number ######################################
28import sasview
29VERSION = sasview.__version__
30##############################################################
31
32package_dir = {}
33package_data = {}
34packages = []
35ext_modules = []
36
37# Remove all files that should be updated by this setup
38# We do this here because application updates these files from .sasview
39# except when there is no such file
40# Todo : make this list generic
41plugin_model_list = ['polynominal5.py', 'sph_bessel_jn.py', 
42                     'sum_Ap1_1_Ap2.py', 'sum_p1_p2.py', 
43                     'testmodel_2.py', 'testmodel.py',
44                     'polynominal5.pyc', 'sph_bessel_jn.pyc', 
45                     'sum_Ap1_1_Ap2.pyc', 'sum_p1_p2.pyc', 
46                     'testmodel_2.pyc', 'testmodel.pyc', 'plugins.log']
47sas_dir = os.path.join(os.path.expanduser("~"),'.sasview')
48if os.path.isdir(sas_dir):
49    f_path = os.path.join(sas_dir, "sasview.log")
50    if os.path.isfile(f_path):
51        os.remove(f_path)
52    f_path = os.path.join(sas_dir, "serialized_cat.json")
53    if os.path.isfile(f_path):
54        os.remove(f_path)
55    f_path = os.path.join(sas_dir, 'config', "custom_config.py")
56    if os.path.isfile(f_path):
57        os.remove(f_path)
58    f_path = os.path.join(sas_dir, 'plugin_models')
59    if os.path.isdir(f_path):
60        for f in os.listdir(f_path): 
61            if f in plugin_model_list:
62                file_path =  os.path.join(f_path, f)
63                os.remove(file_path)
64                   
65# 'sys.maxsize' and 64bit: Not supported for python2.5
66is_64bits = False
67if sys.version_info >= (2, 6):
68    is_64bits = sys.maxsize > 2**32
69   
70enable_openmp = True
71
72if sys.platform =='darwin':
73    if not is_64bits:
74        # Disable OpenMP
75        enable_openmp = False
76    else:
77        # Newer versions of Darwin don't support openmp
78        try:
79            darwin_ver = int(os.uname()[2].split('.')[0])
80            if darwin_ver >= 12:
81                enable_openmp = False
82        except:
83            print "PROBLEM determining Darwin version"
84
85# Options to enable OpenMP
86copt =  {'msvc': ['/openmp'],
87         'mingw32' : ['-fopenmp'],
88         'unix' : ['-fopenmp']}
89lopt =  {'msvc': ['/MANIFEST'],
90         'mingw32' : ['-fopenmp'],
91         'unix' : ['-lgomp']}
92
93# Platform-specific link options
94platform_lopt = {'msvc' : ['/MANIFEST']}
95platform_copt = {}
96
97# Set copts to get compile working on OS X >= 10.9 using clang
98if sys.platform =='darwin':
99    try:
100        darwin_ver = int(os.uname()[2].split('.')[0])
101        if darwin_ver >= 13:
102            platform_copt = {'unix' : ['-Wno-error=unused-command-line-argument-hard-error-in-future']}
103    except:
104        print "PROBLEM determining Darwin version"
105
106class DisableOpenMPCommand(Command):
107    description = "The version of MinGW that comes with Anaconda does not come with OpenMP :( "\
108                  "This commands means we can turn off compiling with OpenMP for this or any "\
109                  "other reason."
110    user_options = []
111
112    def initialize_options(self):
113        self.cwd = None
114
115    def finalize_options(self):
116        self.cwd = os.getcwd()
117        global enable_openmp
118        enable_openmp = False
119
120    def run(self):
121        pass
122
123class build_ext_subclass( build_ext ):
124    def build_extensions(self):
125        # Get 64-bitness
126        c = self.compiler.compiler_type
127        print "Compiling with %s (64bit=%s)" % (c, str(is_64bits))
128       
129        # OpenMP build options
130        if enable_openmp:
131            if copt.has_key(c):
132                for e in self.extensions:
133                    e.extra_compile_args = copt[ c ]
134            if lopt.has_key(c):
135                for e in self.extensions:
136                    e.extra_link_args = lopt[ c ]
137                   
138        # Platform-specific build options
139        if platform_lopt.has_key(c):
140            for e in self.extensions:
141                e.extra_link_args = platform_lopt[ c ]
142
143        if platform_copt.has_key(c):
144            for e in self.extensions:
145                e.extra_compile_args = platform_copt[ c ]
146
147
148        build_ext.build_extensions(self)
149
150class BuildSphinxCommand(Command):
151    description = "Build Sphinx documentation."
152    user_options = []
153
154    def initialize_options(self):
155        self.cwd = None
156
157    def finalize_options(self):
158        self.cwd = os.getcwd()
159
160    def run(self):       
161        build_sphinx.clean()
162        build_sphinx.retrieve_user_docs()
163        build_sphinx.apidoc()
164        build_sphinx.build()
165
166# sas module
167package_dir["sas"] = os.path.join("src", "sas")
168packages.append("sas")
169
170# sas.invariant
171package_dir["sas.invariant"] = os.path.join("src", "sas", "invariant")
172packages.extend(["sas.invariant"])
173
174# sas.guiframe
175guiframe_path = os.path.join("src", "sas", "guiframe")
176package_dir["sas.guiframe"] = guiframe_path
177package_dir["sas.guiframe.local_perspectives"] = os.path.join(os.path.join(guiframe_path, "local_perspectives"))
178package_data["sas.guiframe"] = ['images/*', 'media/*']
179packages.extend(["sas.guiframe", "sas.guiframe.local_perspectives"])
180# build local plugin
181for d in os.listdir(os.path.join(guiframe_path, "local_perspectives")):
182    if d not in ['.svn','__init__.py', '__init__.pyc']:
183        package_name = "sas.guiframe.local_perspectives." + d
184        packages.append(package_name)
185        package_dir[package_name] = os.path.join(guiframe_path, "local_perspectives", d)
186
187# sas.dataloader
188package_dir["sas.dataloader"] = os.path.join("src", "sas", "dataloader")
189package_data["sas.dataloader.readers"] = ['defaults.xml','schema/*.xsd']
190packages.extend(["sas.dataloader","sas.dataloader.readers","sas.dataloader.readers.schema"])
191
192# sas.calculator
193package_dir["sas.calculator"] =os.path.join("src", "sas", "calculator")
194packages.extend(["sas.calculator"])
195   
196# sas.pr
197numpy_incl_path = os.path.join(NUMPY_INC, "numpy")
198srcdir  = os.path.join("src", "sas", "pr", "c_extensions")
199package_dir["sas.pr.core"] = srcdir
200package_dir["sas.pr"] = os.path.join("src","sas", "pr")
201packages.extend(["sas.pr","sas.pr.core"])
202ext_modules.append( Extension("sas.pr.core.pr_inversion",
203                              sources = [os.path.join(srcdir, "Cinvertor.c"),
204                                         os.path.join(srcdir, "invertor.c"),
205                                         ],
206                              include_dirs=[numpy_incl_path],
207                              ) )
208       
209# sas.fit (park integration)
210package_dir["sas.fit"] = os.path.join("src", "sas", "fit")
211packages.append("sas.fit")
212
213# Perspectives
214package_dir["sas.perspectives"] = os.path.join("src", "sas", "perspectives")
215package_dir["sas.perspectives.pr"] = os.path.join("src", "sas", "perspectives", "pr")
216packages.extend(["sas.perspectives","sas.perspectives.pr"])
217package_data["sas.perspectives.pr"] = ['images/*']
218
219package_dir["sas.perspectives.invariant"] = os.path.join("src", "sas", "perspectives", "invariant")
220packages.extend(["sas.perspectives.invariant"])
221package_data['sas.perspectives.invariant'] = [os.path.join("media",'*')]
222
223package_dir["sas.perspectives.fitting"] = os.path.join("src", "sas", "perspectives", "fitting")
224package_dir["sas.perspectives.fitting.plugin_models"] = os.path.join("src", "sas", "perspectives", "fitting", "plugin_models")
225packages.extend(["sas.perspectives.fitting", 
226                 "sas.perspectives.fitting.plugin_models"])
227package_data['sas.perspectives.fitting'] = ['media/*','plugin_models/*']
228
229packages.extend(["sas.perspectives", "sas.perspectives.calculator"])   
230package_data['sas.perspectives.calculator'] = ['images/*', 'media/*']
231   
232# Data util
233package_dir["data_util"] = os.path.join("src", "sas", "data_util")
234packages.append("sas.data_util")
235
236# Plottools
237package_dir["sas.plottools"] = os.path.join("src", "sas", "plottools")
238packages.append("sas.plottools")
239
240# Park 1.2.1
241package_dir["park"]="park-1.2.1/park"
242packages.extend(["park"])
243package_data["park"] = ['park-1.2.1/*.txt', 'park-1.2.1/park.epydoc']
244ext_modules.append( Extension("park._modeling",
245                              sources = [ os.path.join("park-1.2.1", 
246                                                "park", "lib", "modeling.cc"),
247                                         os.path.join("park-1.2.1", 
248                                                "park", "lib", "resolution.c"),
249                                         ],
250                              ) )
251
252# sas models
253includedir  = os.path.join("src", "sas", "models", "include")
254igordir = os.path.join("src", "sas", "models", "c_extension", "libigor")
255cephes_dir = os.path.join("src", "sas", "models", "c_extension", "cephes")
256c_model_dir = os.path.join("src", "sas", "models", "c_extension", "c_models")
257smear_dir  = os.path.join("src", "sas", "models", "c_extension", "c_smearer")
258gen_dir  = os.path.join("src", "sas", "models", "c_extension", "c_gen")
259wrapper_dir  = os.path.join("src", "sas", "models", "c_extension", "python_wrapper", "generated")
260model_dir = os.path.join("src", "sas","models")
261
262if os.path.isdir(wrapper_dir):
263    for file in os.listdir(wrapper_dir): 
264        file_path =  os.path.join(wrapper_dir, file)
265        os.remove(file_path)
266else:
267    os.makedirs(wrapper_dir)
268sys.path.append(os.path.join("src", "sas", "models", "c_extension", "python_wrapper"))
269from wrapping import generate_wrappers
270generate_wrappers(header_dir = includedir, 
271                  output_dir = model_dir,
272                  c_wrapper_dir = wrapper_dir)
273
274IGNORED_FILES = [".svn"]
275if not os.name=='nt':
276    IGNORED_FILES.extend(["gamma_win.c","winFuncs.c"])
277
278EXTENSIONS = [".c", ".cpp"]
279
280def append_file(file_list, dir_path):
281    """
282    Add sources file to sources
283    """
284    for f in os.listdir(dir_path):
285        if os.path.isfile(os.path.join(dir_path, f)):
286            _, ext = os.path.splitext(f)
287            if ext.lower() in EXTENSIONS and f not in IGNORED_FILES:
288                file_list.append(os.path.join(dir_path, f)) 
289        elif os.path.isdir(os.path.join(dir_path, f)) and \
290                not f.startswith("."):
291            sub_dir = os.path.join(dir_path, f)
292            for new_f in os.listdir(sub_dir):
293                if os.path.isfile(os.path.join(sub_dir, new_f)):
294                    _, ext = os.path.splitext(new_f)
295                    if ext.lower() in EXTENSIONS and\
296                         new_f not in IGNORED_FILES:
297                        file_list.append(os.path.join(sub_dir, new_f)) 
298       
299model_sources = []
300append_file(file_list=model_sources, dir_path=igordir)
301append_file(file_list=model_sources, dir_path=c_model_dir)
302append_file(file_list=model_sources, dir_path=wrapper_dir)
303
304smear_sources = []
305append_file(file_list=smear_sources, dir_path=smear_dir)
306       
307package_dir["sas.models"] = model_dir
308package_dir["sas.models.sas_extension"] = os.path.join("src", "sas", "models", "sas_extension")
309package_data['sas.models'] = [os.path.join('media', "*.*")]
310package_data['sas.models'] += [os.path.join('media','img', "*.*")]
311packages.extend(["sas.models","sas.models.sas_extension"])
312   
313smearer_sources = [os.path.join(smear_dir, "smearer.cpp"),
314                  os.path.join(smear_dir, "smearer_module.cpp")]
315geni_sources = [os.path.join(gen_dir, "sld2i_module.cpp")]
316if os.name=='nt':
317    smearer_sources.append(os.path.join(igordir, "winFuncs.c"))
318    geni_sources.append(os.path.join(igordir, "winFuncs.c"))
319
320c_models = [ 
321    Extension("sas.models.sas_extension.c_models",
322        sources=model_sources,                 
323        include_dirs=[
324            igordir, includedir, c_model_dir, numpy_incl_path, cephes_dir
325        ],
326    ),
327
328    # Smearer extension
329    Extension("sas.models.sas_extension.smearer",
330        sources = smearer_sources,
331        include_dirs=[igordir,  smear_dir, numpy_incl_path],
332    ),
333                   
334    Extension("sas.models.sas_extension.smearer2d_helper",
335        sources = [
336            os.path.join(smear_dir, "smearer2d_helper_module.cpp"),
337            os.path.join(smear_dir, "smearer2d_helper.cpp"),
338        ],
339        include_dirs=[smear_dir, numpy_incl_path],
340    ),
341                   
342    Extension("sas.models.sas_extension.sld2i",
343        sources = [
344            os.path.join(gen_dir, "sld2i_module.cpp"),
345            os.path.join(gen_dir, "sld2i.cpp"),
346            os.path.join(c_model_dir, "libfunc.c"),
347            os.path.join(c_model_dir, "librefl.c"),
348        ],
349        include_dirs=[gen_dir, includedir,  c_model_dir, numpy_incl_path],
350    ),
351]
352
353# Comment out the following to avoid rebuilding all the models
354ext_modules.extend(c_models)
355
356# SasView
357
358package_dir["sas.sasview"] = "sasview"
359package_data['sas.sasview'] = ['images/*', 'media/*', 'test/*', 
360                                 'default_categories.json']
361packages.append("sas.sasview")
362
363required = [
364    'bumps>=0.7.5.4', 'periodictable>=1.3.1', 'pyparsing<2.0.0',
365
366    # 'lxml>=2.2.2',
367    'lxml', 
368
369    ## The following dependecies won't install automatically, so assume them
370    ## The numbers should be bumped up for matplotlib and wxPython as well.
371    # 'numpy>=1.4.1', 'scipy>=0.7.2', 'matplotlib>=0.99.1.1',
372    # 'wxPython>=2.8.11', 'pil',
373    ]
374
375if os.name=='nt':
376    required.extend(['html5lib', 'reportlab'])
377else:
378    required.extend(['pil'])
379   
380# Set up SasView   
381setup(
382    name="sasview",
383    version = VERSION,
384    description = "SasView application",
385    author = "University of Tennessee",
386    author_email = "sansdanse@gmail.com",
387    url = "http://sasview.org",
388    license = "PSF",
389    keywords = "small-angle x-ray and neutron scattering analysis",
390    download_url = "https://sourceforge.net/projects/sansviewproject/files/",
391    package_dir = package_dir,
392    packages = packages,
393    package_data = package_data,
394    ext_modules = ext_modules,
395    install_requires = required,
396    zip_safe = False,
397    entry_points = {
398                    'console_scripts':[
399                                       "sasview = sas.sasview.sasview:run",
400                                       ]
401                    },
402    cmdclass = {'build_ext': build_ext_subclass,
403                'docs': BuildSphinxCommand,
404                'disable_openmp': DisableOpenMPCommand}
405    )   
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