source: sasview/setup.py @ 6b43c58

Last change on this file since 6b43c58 was f4a1433, checked in by Piotr Rozyczko <rozyczko@…>, 7 years ago

Merge branch 'master' into ESS_GUI
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[f36e01f]1# -*- coding: utf-8 -*-
2#!/usr/bin/env python
3
[d6bc28cf]4"""
[c329f4d]5    Setup for SasView
[f36e01f]6    TODO: Add checks to see that all the dependencies are on the system
[d6bc28cf]7"""
[d66dbcc]8from __future__ import print_function
[f36e01f]9
[d6bc28cf]10import os
[6c7e4cc1]11import subprocess
[c8843be]12import shutil
[f36e01f]13import sys
[2cef9d3]14from distutils.command.build_ext import build_ext
[968aa6e]15from distutils.core import Command
[f36e01f]16
[9a5097c]17import numpy as np
[f36e01f]18from setuptools import Extension, setup
[d6bc28cf]19
[5548954]20# Manage version number ######################################
[efe730d]21with open(os.path.join("src", "sas", "sasview", "__init__.py")) as fid:
22    for line in fid:
23        if line.startswith('__version__'):
24            VERSION = line.split('"')[1]
25            break
26    else:
27        raise ValueError("Could not find version in src/sas/sasview/__init__.py")
[5548954]28##############################################################
29
[d6bc28cf]30package_dir = {}
31package_data = {}
32packages = []
33ext_modules = []
34
[8ab3302]35# Remove all files that should be updated by this setup
[3a39c2e]36# We do this here because application updates these files from .sasview
[8ab3302]37# except when there is no such file
38# Todo : make this list generic
[f36e01f]39# plugin_model_list = ['polynominal5.py', 'sph_bessel_jn.py',
[a62945e]40#                      'sum_Ap1_1_Ap2.py', 'sum_p1_p2.py',
41#                      'testmodel_2.py', 'testmodel.py',
42#                      'polynominal5.pyc', 'sph_bessel_jn.pyc',
43#                      'sum_Ap1_1_Ap2.pyc', 'sum_p1_p2.pyc',
44#                      'testmodel_2.pyc', 'testmodel.pyc', 'plugins.log']
[c8843be]45
46CURRENT_SCRIPT_DIR = os.path.dirname(os.path.abspath(__file__))
47SASVIEW_BUILD = os.path.join(CURRENT_SCRIPT_DIR, "build")
48
[914ba0a]49# TODO: build step should not be messing with existing installation!!
[f36e01f]50sas_dir = os.path.join(os.path.expanduser("~"), '.sasview')
[3a39c2e]51if os.path.isdir(sas_dir):
52    f_path = os.path.join(sas_dir, "sasview.log")
[e615a0d]53    if os.path.isfile(f_path):
54        os.remove(f_path)
[50008e3]55    f_path = os.path.join(sas_dir, "categories.json")
[ea5fa58]56    if os.path.isfile(f_path):
57        os.remove(f_path)
[3a39c2e]58    f_path = os.path.join(sas_dir, 'config', "custom_config.py")
[e615a0d]59    if os.path.isfile(f_path):
60        os.remove(f_path)
[5881b17]61    #f_path = os.path.join(sas_dir, 'plugin_models')
[f36e01f]62    # if os.path.isdir(f_path):
[a62945e]63    #     for f in os.listdir(f_path):
64    #         if f in plugin_model_list:
65    #             file_path =  os.path.join(f_path, f)
66    #             os.remove(file_path)
[899e084]67
[f542866]68
69# Optionally clean before build.
70dont_clean = 'update' in sys.argv
71if dont_clean:
72    sys.argv.remove('update')
73elif os.path.exists(SASVIEW_BUILD):
[d66dbcc]74    print("Removing existing build directory", SASVIEW_BUILD, "for a clean build")
[899e084]75    shutil.rmtree(SASVIEW_BUILD)
[18e7309]76
[e615a0d]77# 'sys.maxsize' and 64bit: Not supported for python2.5
[899e084]78is_64bits = sys.maxsize > 2**32
[18e7309]79
[7a04dbb]80enable_openmp = False
[f36e01f]81if sys.platform == 'darwin':
[f468791]82    if not is_64bits:
83        # Disable OpenMP
84        enable_openmp = False
85    else:
86        # Newer versions of Darwin don't support openmp
87        try:
88            darwin_ver = int(os.uname()[2].split('.')[0])
89            if darwin_ver >= 12:
90                enable_openmp = False
91        except:
[f3bf622]92            print("PROBLEM determining Darwin version")
[b30ed8f]93
94# Options to enable OpenMP
[f36e01f]95copt = {'msvc': ['/openmp'],
96        'mingw32': ['-fopenmp'],
97        'unix': ['-fopenmp']}
98lopt = {'msvc': ['/MANIFEST'],
99        'mingw32': ['-fopenmp'],
100        'unix': ['-lgomp']}
[13f00a0]101
[ebdb833]102# Platform-specific link options
[f36e01f]103platform_lopt = {'msvc': ['/MANIFEST']}
[307fa4f]104platform_copt = {}
[b9c8fc5]105
106# Set copts to get compile working on OS X >= 10.9 using clang
[f36e01f]107if sys.platform == 'darwin':
[b9c8fc5]108    try:
109        darwin_ver = int(os.uname()[2].split('.')[0])
[4adf48e]110        if darwin_ver >= 13 and darwin_ver < 14:
[f36e01f]111            platform_copt = {
112                'unix': ['-Wno-error=unused-command-line-argument-hard-error-in-future']}
[b9c8fc5]113    except:
[f3bf622]114        print("PROBLEM determining Darwin version")
[b9c8fc5]115
[f36e01f]116
[5972029]117class DisableOpenMPCommand(Command):
118    description = "The version of MinGW that comes with Anaconda does not come with OpenMP :( "\
119                  "This commands means we can turn off compiling with OpenMP for this or any "\
120                  "other reason."
121    user_options = []
122
123    def initialize_options(self):
124        self.cwd = None
125
126    def finalize_options(self):
127        self.cwd = os.getcwd()
128        global enable_openmp
129        enable_openmp = False
[1829835]130
[5972029]131    def run(self):
132        pass
[ebdb833]133
[f36e01f]134
135class build_ext_subclass(build_ext):
[13f00a0]136    def build_extensions(self):
137        # Get 64-bitness
138        c = self.compiler.compiler_type
[f3bf622]139        print("Compiling with %s (64bit=%s)" % (c, str(is_64bits)))
[18e7309]140
[ebdb833]141        # OpenMP build options
[b30ed8f]142        if enable_openmp:
[f3bf622]143            if c in copt:
[5980b1a]144                for e in self.extensions:
[f36e01f]145                    e.extra_compile_args = copt[c]
[f3bf622]146            if c in lopt:
[13f00a0]147                for e in self.extensions:
[f36e01f]148                    e.extra_link_args = lopt[c]
[18e7309]149
[ebdb833]150        # Platform-specific build options
[f3bf622]151        if c in platform_lopt:
[ebdb833]152            for e in self.extensions:
[f36e01f]153                e.extra_link_args = platform_lopt[c]
[ebdb833]154
[f3bf622]155        if c in platform_copt:
[1829835]156            for e in self.extensions:
[f36e01f]157                e.extra_compile_args = platform_copt[c]
[1829835]158
[13f00a0]159        build_ext.build_extensions(self)
[d6bc28cf]160
[f36e01f]161
[968aa6e]162class BuildSphinxCommand(Command):
163    description = "Build Sphinx documentation."
164    user_options = []
165
166    def initialize_options(self):
167        self.cwd = None
168
169    def finalize_options(self):
170        self.cwd = os.getcwd()
171
[d8c4019]172    def run(self):
[115eb7e]173        ''' First builds the sasmodels documentation if the directory
174        is present. Then builds the sasview docs.
175        '''
176        ### AJJ - Add code for building sasmodels docs here:
177        # check for doc path
[14bb7a4]178        SASMODELS_DOCPATH = os.path.abspath(os.path.join(os.getcwd(), '..', 'sasmodels', 'doc'))
179        print("========= check for sasmodels at", SASMODELS_DOCPATH, "============")
[6c7e4cc1]180        if os.path.exists(SASMODELS_DOCPATH):
181            if os.path.isdir(SASMODELS_DOCPATH):
[115eb7e]182                # if available, build sasmodels docs
[21bba86]183                print("============= Building sasmodels model documentation ===============")
[14bb7a4]184                smdocbuild = subprocess.call(["make", "-C", SASMODELS_DOCPATH, "html"])
[6c7e4cc1]185        else:
186            # if not available warning message
[21bba86]187            print("== !!WARNING!! sasmodels directory not found. Cannot build model docs. ==")
[115eb7e]188
189        #Now build sasview (+sasmodels) docs
[d8c4019]190        sys.path.append("docs/sphinx-docs")
191        import build_sphinx
[c2ee2b1]192        build_sphinx.rebuild()
[968aa6e]193
[f36e01f]194
[3a39c2e]195# sas module
196package_dir["sas"] = os.path.join("src", "sas")
197packages.append("sas")
[29e96f3]198
[e0bbb7c]199# sas module
200package_dir["sas.sasgui"] = os.path.join("src", "sas", "sasgui")
201packages.append("sas.sasgui")
202
[985ad94]203# qt module
204package_dir["sas.qtgui"] = os.path.join("src", "sas", "qtgui")
205packages.append("sas.qtgui")
206
[e0bbb7c]207# sas module
208package_dir["sas.sascalc"] = os.path.join("src", "sas", "sascalc")
209packages.append("sas.sascalc")
210
211# sas.sascalc.invariant
[f36e01f]212package_dir["sas.sascalc.invariant"] = os.path.join(
213    "src", "sas", "sascalc", "invariant")
[e0bbb7c]214packages.extend(["sas.sascalc.invariant"])
[d6bc28cf]215
[d85c194]216# sas.sasgui.guiframe
217guiframe_path = os.path.join("src", "sas", "sasgui", "guiframe")
218package_dir["sas.sasgui.guiframe"] = guiframe_path
[f36e01f]219package_dir["sas.sasgui.guiframe.local_perspectives"] = os.path.join(
220    os.path.join(guiframe_path, "local_perspectives"))
[d85c194]221package_data["sas.sasgui.guiframe"] = ['images/*', 'media/*']
[f36e01f]222packages.extend(
223    ["sas.sasgui.guiframe", "sas.sasgui.guiframe.local_perspectives"])
[d6bc28cf]224# build local plugin
[5980b1a]225for d in os.listdir(os.path.join(guiframe_path, "local_perspectives")):
[f36e01f]226    if d not in ['.svn', '__init__.py', '__init__.pyc']:
[d85c194]227        package_name = "sas.sasgui.guiframe.local_perspectives." + d
[3d24489]228        packages.append(package_name)
[f36e01f]229        package_dir[package_name] = os.path.join(
230            guiframe_path, "local_perspectives", d)
[d6bc28cf]231
[e0bbb7c]232# sas.sascalc.dataloader
[f36e01f]233package_dir["sas.sascalc.dataloader"] = os.path.join(
234    "src", "sas", "sascalc", "dataloader")
[7a5d066]235package_data["sas.sascalc.dataloader.readers"] = ['schema/*.xsd']
[f36e01f]236packages.extend(["sas.sascalc.dataloader", "sas.sascalc.dataloader.readers",
237                 "sas.sascalc.dataloader.readers.schema"])
[d6bc28cf]238
239
[e0bbb7c]240# sas.sascalc.calculator
[9e531f2]241gen_dir = os.path.join("src", "sas", "sascalc", "calculator", "c_extensions")
242package_dir["sas.sascalc.calculator.core"] = gen_dir
[f36e01f]243package_dir["sas.sascalc.calculator"] = os.path.join(
244    "src", "sas", "sascalc", "calculator")
245packages.extend(["sas.sascalc.calculator", "sas.sascalc.calculator.core"])
246ext_modules.append(Extension("sas.sascalc.calculator.core.sld2i",
247                             sources=[
248                                 os.path.join(gen_dir, "sld2i_module.cpp"),
249                                 os.path.join(gen_dir, "sld2i.cpp"),
250                                 os.path.join(gen_dir, "libfunc.c"),
251                                 os.path.join(gen_dir, "librefl.c"),
252                             ],
253                             include_dirs=[gen_dir],
254                             )
255                   )
[9e531f2]256
[b699768]257# sas.sascalc.pr
[f36e01f]258srcdir = os.path.join("src", "sas", "sascalc", "pr", "c_extensions")
[b699768]259package_dir["sas.sascalc.pr.core"] = srcdir
[f36e01f]260package_dir["sas.sascalc.pr"] = os.path.join("src", "sas", "sascalc", "pr")
261packages.extend(["sas.sascalc.pr", "sas.sascalc.pr.core"])
262ext_modules.append(Extension("sas.sascalc.pr.core.pr_inversion",
263                             sources=[os.path.join(srcdir, "Cinvertor.c"),
264                                      os.path.join(srcdir, "invertor.c"),
265                                      ],
266                             include_dirs=[],
267                             ))
[18e7309]268
269
270# sas.sascalc.file_converter
271mydir = os.path.join("src", "sas", "sascalc", "file_converter", "c_ext")
272package_dir["sas.sascalc.file_converter.core"] = mydir
[f36e01f]273package_dir["sas.sascalc.file_converter"] = os.path.join(
274    "src", "sas", "sascalc", "file_converter")
275packages.extend(["sas.sascalc.file_converter",
276                 "sas.sascalc.file_converter.core"])
[985ad94]277
[f36e01f]278ext_modules.append(Extension("sas.sascalc.file_converter.core.bsl_loader",
279                             sources=[os.path.join(mydir, "bsl_loader.c")],
280                             include_dirs=[np.get_include()],
281                             ))
282# sas.sascalc.corfunc
283package_dir["sas.sascalc.corfunc"] = os.path.join(
284    "src", "sas", "sascalc", "corfunc")
[1e13b53]285packages.extend(["sas.sascalc.corfunc"])
286
[b699768]287# sas.sascalc.fit
288package_dir["sas.sascalc.fit"] = os.path.join("src", "sas", "sascalc", "fit")
289packages.append("sas.sascalc.fit")
[3d24489]290
291# Perspectives
[f36e01f]292package_dir["sas.sasgui.perspectives"] = os.path.join(
293    "src", "sas", "sasgui", "perspectives")
294package_dir["sas.sasgui.perspectives.pr"] = os.path.join(
295    "src", "sas", "sasgui", "perspectives", "pr")
296packages.extend(["sas.sasgui.perspectives", "sas.sasgui.perspectives.pr"])
[1e13b53]297package_data["sas.sasgui.perspectives.pr"] = ['media/*']
[d85c194]298
[f36e01f]299package_dir["sas.sasgui.perspectives.invariant"] = os.path.join(
300    "src", "sas", "sasgui", "perspectives", "invariant")
[d85c194]301packages.extend(["sas.sasgui.perspectives.invariant"])
[f36e01f]302package_data['sas.sasgui.perspectives.invariant'] = [
303    os.path.join("media", '*')]
304
305package_dir["sas.sasgui.perspectives.fitting"] = os.path.join(
306    "src", "sas", "sasgui", "perspectives", "fitting")
307package_dir["sas.sasgui.perspectives.fitting.plugin_models"] = os.path.join(
308    "src", "sas", "sasgui", "perspectives", "fitting", "plugin_models")
309packages.extend(["sas.sasgui.perspectives.fitting",
310                 "sas.sasgui.perspectives.fitting.plugin_models"])
311package_data['sas.sasgui.perspectives.fitting'] = [
312    'media/*', 'plugin_models/*']
313
314packages.extend(["sas.sasgui.perspectives",
315                 "sas.sasgui.perspectives.calculator"])
[d85c194]316package_data['sas.sasgui.perspectives.calculator'] = ['images/*', 'media/*']
[18e7309]317
[f36e01f]318package_dir["sas.sasgui.perspectives.corfunc"] = os.path.join(
319    "src", "sas", "sasgui", "perspectives", "corfunc")
[1e13b53]320packages.extend(["sas.sasgui.perspectives.corfunc"])
321package_data['sas.sasgui.perspectives.corfunc'] = ['media/*']
322
[f36e01f]323package_dir["sas.sasgui.perspectives.file_converter"] = os.path.join(
324    "src", "sas", "sasgui", "perspectives", "file_converter")
[1e13b53]325packages.extend(["sas.sasgui.perspectives.file_converter"])
326package_data['sas.sasgui.perspectives.file_converter'] = ['media/*']
327
[d6bc28cf]328# Data util
[f36e01f]329package_dir["sas.sascalc.data_util"] = os.path.join(
330    "src", "sas", "sascalc", "data_util")
[b699768]331packages.append("sas.sascalc.data_util")
[d6bc28cf]332
333# Plottools
[f36e01f]334package_dir["sas.sasgui.plottools"] = os.path.join(
335    "src", "sas", "sasgui", "plottools")
[d7bb526]336packages.append("sas.sasgui.plottools")
[d6bc28cf]337
[985ad94]338# QTGUI
339## UI
340package_dir["sas.qtgui.UI"] = os.path.join(
341    "src", "sas", "qtgui", "UI")
342packages.append("sas.qtgui.UI")
343
[377ade1]344## UnitTesting
345package_dir["sas.qtgui.UnitTesting"] = os.path.join(
346    "src", "sas", "qtgui", "UnitTesting")
347packages.append("sas.qtgui.UnitTesting")
348
[985ad94]349## Utilities
350package_dir["sas.qtgui.Utilities"] = os.path.join(
351    "src", "sas", "qtgui", "Utilities")
352packages.append("sas.qtgui.Utilities")
353
354package_dir["sas.qtgui.Calculators"] = os.path.join(
355    "src", "sas", "qtgui", "Calculators")
356package_dir["sas.qtgui.Calculators.UI"] = os.path.join(
357    "src", "sas", "qtgui", "Calculators", "UI")
358packages.extend(["sas.qtgui.Calculators", "sas.qtgui.Calculators.UI"])
359
360package_dir["sas.qtgui.MainWindow"] = os.path.join(
361    "src", "sas", "qtgui", "MainWindow")
362package_dir["sas.qtgui.MainWindow.UI"] = os.path.join(
363    "src", "sas", "qtgui", "MainWindow", "UI")
364packages.extend(["sas.qtgui.MainWindow", "sas.qtgui.MainWindow.UI"])
365
366## Perspectives
367package_dir["sas.qtgui.Perspectives"] = os.path.join(
368    "src", "sas", "qtgui", "Perspectives")
369packages.append("sas.qtgui.Perspectives")
370
371package_dir["sas.qtgui.Perspectives.Invariant"] = os.path.join(
372    "src", "sas", "qtgui", "Perspectives", "Invariant")
373package_dir["sas.qtgui.Perspectives.Invariant.UI"] = os.path.join(
374    "src", "sas", "qtgui", "Perspectives", "Invariant", "UI")
375packages.extend(["sas.qtgui.Perspectives.Invariant", "sas.qtgui.Perspectives.Invariant.UI"])
376
377package_dir["sas.qtgui.Perspectives.Fitting"] = os.path.join(
378    "src", "sas", "qtgui", "Perspectives", "Fitting")
379package_dir["sas.qtgui.Perspectives.Fitting.UI"] = os.path.join(
380    "src", "sas", "qtgui", "Perspectives", "Fitting", "UI")
381packages.extend(["sas.qtgui.Perspectives.Fitting", "sas.qtgui.Perspectives.Fitting.UI"])
382
383## Plotting
384package_dir["sas.qtgui.Plotting"] = os.path.join(
385    "src", "sas", "qtgui", "Plotting")
386package_dir["sas.qtgui.Plotting.UI"] = os.path.join(
387    "src", "sas", "qtgui", "Plotting", "UI")
388package_dir["sas.qtgui.Plotting.Slicers"] = os.path.join(
389    "src", "sas", "qtgui", "Plotting", "Slicers")
390packages.extend(["sas.qtgui.Plotting", "sas.qtgui.Plotting.UI", "sas.qtgui.Plotting.Slicers"])
391
392
393
[9274711]394# # Last of the sas.models
395# package_dir["sas.models"] = os.path.join("src", "sas", "models")
396# packages.append("sas.models")
[2d1b700]397
[d6bc28cf]398EXTENSIONS = [".c", ".cpp"]
399
[f36e01f]400
[d6bc28cf]401def append_file(file_list, dir_path):
402    """
403    Add sources file to sources
404    """
405    for f in os.listdir(dir_path):
406        if os.path.isfile(os.path.join(dir_path, f)):
407            _, ext = os.path.splitext(f)
[4c29e4d]408            if ext.lower() in EXTENSIONS:
[9e531f2]409                file_list.append(os.path.join(dir_path, f))
[d6bc28cf]410        elif os.path.isdir(os.path.join(dir_path, f)) and \
411                not f.startswith("."):
412            sub_dir = os.path.join(dir_path, f)
413            for new_f in os.listdir(sub_dir):
414                if os.path.isfile(os.path.join(sub_dir, new_f)):
415                    _, ext = os.path.splitext(new_f)
[4c29e4d]416                    if ext.lower() in EXTENSIONS:
[9e531f2]417                        file_list.append(os.path.join(sub_dir, new_f))
[820df88]418
[f36e01f]419
[820df88]420# Comment out the following to avoid rebuilding all the models
[9e531f2]421file_sources = []
422append_file(file_sources, gen_dir)
[820df88]423
[f36e01f]424# Wojtek's hacky way to add doc files while bundling egg
425# def add_doc_files(directory):
[5881b17]426#    paths = []
427#    for (path, directories, filenames) in os.walk(directory):
428#        for filename in filenames:
429#            paths.append(os.path.join(path, filename))
430#    return paths
431
432#doc_files = add_doc_files('doc')
433
[c329f4d]434# SasView
[ed03b99]435package_data['sas'] = ['logging.ini']
[5881b17]436package_data['sas.sasview'] = ['images/*',
[bbb8a56]437                               'media/*',
[d4c88e24]438                               'test/*.txt',
[bbb8a56]439                               'test/1d_data/*',
440                               'test/2d_data/*',
[27109e5]441                               'test/convertible_files/*',
442                               'test/coordinate_data/*',
443                               'test/image_data/*',
444                               'test/media/*',
445                               'test/other_files/*',
[bbb8a56]446                               'test/save_states/*',
[7152c82]447                               'test/sesans_data/*',
448                               'test/upcoming_formats/*',
[27109e5]449                               ]
[3a39c2e]450packages.append("sas.sasview")
[d6bc28cf]451
[9f32c57]452required = [
[36ca21e]453    'bumps>=0.7.5.9', 'periodictable>=1.5.0', 'pyparsing<2.0.0',
[9f32c57]454
455    # 'lxml>=2.2.2',
[db74ee8]456    'lxml', 'h5py',
[9f32c57]457
[f36e01f]458    # The following dependecies won't install automatically, so assume them
459    # The numbers should be bumped up for matplotlib and wxPython as well.
[9f32c57]460    # 'numpy>=1.4.1', 'scipy>=0.7.2', 'matplotlib>=0.99.1.1',
461    # 'wxPython>=2.8.11', 'pil',
[f36e01f]462]
[213b445]463
[f36e01f]464if os.name == 'nt':
[7a211030]465    required.extend(['html5lib', 'reportlab'])
[7f59928e]466else:
[775d06f]467    # 'pil' is now called 'pillow'
[5f6336f]468    required.extend(['pillow'])
[5881b17]469
[18e7309]470# Set up SasView
[d6bc28cf]471setup(
[c329f4d]472    name="sasview",
[f36e01f]473    version=VERSION,
474    description="SasView application",
475    author="SasView Team",
476    author_email="developers@sasview.org",
477    url="http://sasview.org",
478    license="PSF",
479    keywords="small-angle x-ray and neutron scattering analysis",
480    download_url="https://github.com/SasView/sasview.git",
481    package_dir=package_dir,
482    packages=packages,
483    package_data=package_data,
484    ext_modules=ext_modules,
485    install_requires=required,
486    zip_safe=False,
487    entry_points={
488        'console_scripts': [
[985ad94]489            "sasview = sas.run",
[f36e01f]490        ]
491    },
492    cmdclass={'build_ext': build_ext_subclass,
493              'docs': BuildSphinxCommand,
494              'disable_openmp': DisableOpenMPCommand}
495)
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