1 | |
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2 | |
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3 | import time |
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4 | import numpy |
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5 | import copy |
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6 | import math |
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7 | import sys |
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8 | import wx |
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9 | |
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10 | from data_util.calcthread import CalcThread |
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11 | from sans.fit.AbstractFitEngine import FitData2D, FitData1D, SansAssembly |
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12 | |
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13 | |
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14 | class CalcChisqr1D(CalcThread): |
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15 | """ |
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16 | Compute chisqr |
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17 | """ |
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18 | def __init__(self, data1d, model, |
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19 | smearer=None, |
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20 | qmin=None, |
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21 | qmax=None, |
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22 | completefn = None, |
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23 | updatefn = None, |
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24 | yieldtime = 0.01, |
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25 | worktime = 0.01 |
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26 | ): |
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27 | CalcThread.__init__(self,completefn, |
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28 | updatefn, |
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29 | yieldtime, |
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30 | worktime) |
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31 | |
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32 | if model ==None or data1d ==None: |
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33 | raise ValueError, "Need data and model to compute chisqr" |
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34 | |
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35 | if data1d.__class__.__name__ !="Data1D": |
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36 | msg= str(data1d.__class__.__name__) |
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37 | raise ValueError, "need Data1D to compute chisqr. Current class %s"%msg |
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38 | |
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39 | self.fitdata= FitData1D(data1d, smearer=smearer) |
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40 | self.fitdata.setFitRange(qmin=qmin,qmax=qmax) |
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41 | self.model = model |
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42 | |
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43 | self.starttime = 0 |
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44 | |
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45 | def isquit(self): |
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46 | """ |
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47 | @raise KeyboardInterrupt: when the thread is interrupted |
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48 | """ |
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49 | try: |
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50 | CalcThread.isquit(self) |
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51 | except KeyboardInterrupt: |
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52 | raise KeyboardInterrupt |
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53 | |
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54 | |
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55 | def compute(self): |
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56 | """ |
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57 | Compute the data given a model function |
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58 | """ |
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59 | self.starttime = time.time() |
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60 | |
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61 | output= None |
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62 | res=[] |
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63 | try: |
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64 | res = self.fitdata.residuals(self.model.evalDistribution) |
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65 | sum=0 |
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66 | for item in res: |
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67 | # Check whether we need to bail out |
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68 | self.isquit() |
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69 | if numpy.isfinite(item): |
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70 | sum +=item*item |
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71 | if len(res)>0: |
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72 | output = sum/ len(res) |
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73 | |
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74 | elapsed = time.time()-self.starttime |
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75 | self.complete(output= output, elapsed=elapsed) |
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76 | |
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77 | except KeyboardInterrupt: |
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78 | # Thread was interrupted, just proceed and re-raise. |
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79 | # Real code should not print, but this is an example... |
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80 | raise |
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81 | |
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82 | |
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83 | class CalcChisqr2D(CalcThread): |
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84 | """ |
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85 | Compute chisqr |
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86 | """ |
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87 | |
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88 | def __init__(self,data2d, model, |
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89 | qmin, |
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90 | qmax, |
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91 | completefn = None, |
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92 | updatefn = None, |
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93 | yieldtime = 0.01, |
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94 | worktime = 0.01 |
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95 | ): |
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96 | CalcThread.__init__(self,completefn, |
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97 | updatefn, |
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98 | yieldtime, |
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99 | worktime) |
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100 | |
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101 | if model ==None or data2d ==None: |
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102 | raise ValueError, "Need data and model to compute chisqr" |
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103 | |
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104 | if data2d.__class__.__name__ !="Data2D": |
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105 | msg= str(data2d.__class__.__name__) |
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106 | raise ValueError, "need Data2D to compute chisqr. Current class %s"%msg |
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107 | |
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108 | self.fitdata = FitData2D(data2d) |
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109 | self.fitdata.setFitRange(qmin=qmin,qmax=qmax) |
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110 | |
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111 | self.model = model |
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112 | |
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113 | self.starttime = 0 |
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114 | |
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115 | def isquit(self): |
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116 | """ |
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117 | @raise KeyboardInterrupt: when the thread is interrupted |
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118 | """ |
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119 | try: |
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120 | CalcThread.isquit(self) |
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121 | except KeyboardInterrupt: |
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122 | raise KeyboardInterrupt |
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123 | |
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124 | |
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125 | def compute(self): |
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126 | """ |
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127 | Compute the data given a model function |
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128 | """ |
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129 | self.starttime = time.time() |
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130 | |
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131 | output= None |
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132 | res=[] |
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133 | try: |
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134 | res = self.fitdata.residuals(self.model.evalDistribution) |
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135 | sum=0 |
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136 | for item in res: |
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137 | # Check whether we need to bail out |
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138 | self.isquit() |
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139 | if numpy.isfinite(item): |
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140 | sum +=item*item |
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141 | if len(res)>0: |
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142 | output = sum/ len(res) |
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143 | |
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144 | elapsed = time.time()-self.starttime |
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145 | self.complete(output= output, elapsed=elapsed) |
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146 | |
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147 | except KeyboardInterrupt: |
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148 | # Thread was interrupted, just proceed and re-raise. |
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149 | # Real code should not print, but this is an example... |
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150 | raise |
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151 | |
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