utest_other_models.py @ 1b28ff5

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload

Last change on this file since 1b28ff5 was 1e40ed1, checked in by Kieran Campbell <kieranrcampbell@…>, 12 years ago
Small problem with the maths in starpolymer
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Rev	Line
[9ce41c6]	1	"""
	2	Unit tests for specific models.
	3	@since: 08/25/2009
	4	@note: The models are running also with numpy array as input.
	5	Some models return limit of the function at critical point .
	6	So the user should expect finite value for some critical points.
[7ef319e]	7	Only critical q=0 will be tested.
	8
	9	Critical points tests that fail. the user is responsible of changing
	10	the model tested or document the failure.
	11
[9ce41c6]	12	Initial values for models are given as the one of Igo software.
	13	@author: Gervaise Alina / UTK
[7ef319e]	14	@summary: Run by G. Alina 10/21/2009
	15	Most of the lamellar tests are not passing. Check lamellar im
	16	plementation.
	17	critial points tested not passing for:
	18	- Flexible Cylinder
	19	- PeakLorenzt
	20	- Squarewell Structure
	21	- StickyHstructure
	22	- hardSphereStructure
	23
[64f0c5d]	24	@ Note: We don't use matrix for 2D anymore so testEval2D can be ignored (JC)
[7ef319e]	25
[9ce41c6]	26	"""
	27
	28	import unittest
	29	import numpy
	30	import math
	31
	32	class TestCoreShell(unittest.TestCase):
	33	""" Unit tests for coreshell model """
	34
	35	def setUp(self):
	36	from sans.models.CoreShellModel import CoreShellModel
	37	self.comp = CoreShellModel()
	38	#Give initial value to model
	39	self.comp.setParam("scale", 1.0)
	40	self.comp.setParam("radius", 60.0)
	41	self.comp.setParam("thickness", 10.0)
	42	self.comp.setParam("core_sld", 1.0e-6)
	43	self.comp.setParam("shell_sld",2.0e-6)
	44	self.comp.setParam("solvent_sld",3.0e-6)
	45	self.comp.setParam("Background", 0.001)
	46
	47	self.x = numpy.array([0.4, 1.3])
	48	self.y = numpy.array([0.5, 1.57])
	49	self.x_array = self.comp.evalDistribution(self.x)
	50	self.y_array = self.comp.evalDistribution(self.y)
[64f0c5d]	51
[9ce41c6]	52	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	53	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	54	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	55
	56	def test1D(self):
	57	""" Test 1D model for a coreshell """
	58	self.assertAlmostEquals(self.comp.run(0.4),0.00169, 4)
	59
	60	def test1D_2(self):
	61	""" Test 2D model for a coreshell """
	62	self.assertAlmostEquals(self.comp.run([0.4, 1.3]),0.00169, 4)
	63
	64	def testEval_1D(self):
	65	""" Test 1D model for a coreshell with evalDistribution"""
	66	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	67	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	68
	69	def testEval_2D(self):
	70	""" Test 2D model for a coreshell with evalDistribution"""
[64f0c5d]	71	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	72	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	73
	74	# No more singular point
	75	#def testCriticalPoint(self):
	76	# """ Test coreshell at the critical point"""
	77	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	78
	79	class TestMultiShellModel(unittest.TestCase):
	80	""" Unit tests for MultiShell Model """
	81
	82	def setUp(self):
	83	from sans.models.MultiShellModel import MultiShellModel
	84	self.comp = MultiShellModel()
	85	#Give initial value to model
	86	self.comp.setParam("scale", 1.0)
	87	self.comp.setParam("core_radius", 60.0)
	88	self.comp.setParam("s_thickness", 10.0)
	89	self.comp.setParam("w_thickness",10.0 )
	90	self.comp.setParam("core_sld",6.4e-6)
	91	self.comp.setParam("shell_sld",4e-7)
	92	self.comp.setParam("n_pairs", 2)
	93	self.comp.setParam("Background", 0.001)
	94
	95	self.x = numpy.array([0.4, 1.3])
	96	self.y = numpy.array([0.5, 1.57])
	97	self.x_array = self.comp.evalDistribution(self.x)
	98	self.y_array = self.comp.evalDistribution(self.y)
	99	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	100	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	101	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	102
	103	def test1D(self):
	104	""" Test 1D model for a MultiShell Model """
	105	self.assertAlmostEquals(self.comp.run(0.001), 2442.81, 2)
	106
	107	def test1D_2(self):
	108	""" Test 2D model for a MultiShell Model"""
	109	self.assertAlmostEquals(self.comp.run([0.001, 0.30903]), 2442.81, 2)
	110
	111	def testEval_1D(self):
	112	""" Test 1D model for a MultiShell with evalDistribution"""
	113	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	114	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	115
	116	def testEval_2D(self):
	117	""" Test 2D model for a MultiShell with evalDistribution"""
[64f0c5d]	118	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	119	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	120
	121	# No more singular point
	122	#def testCriticalPoint(self):
	123	# """ Test multishell at the critical point"""
	124	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	125
	126	class TestVesicleModel(unittest.TestCase):
	127	""" Unit tests for Vesicle Model """
	128
	129	def setUp(self):
	130	from sans.models.VesicleModel import VesicleModel
	131	self.comp = VesicleModel()
	132	#Give initial value to model
	133	self.comp.setParam("scale", 1.0)
	134	self.comp.setParam("radius", 100.0)
[6e2d708]	135	self.comp.setParam("solv_sld", 6.36e-6)
[9ce41c6]	136	self.comp.setParam("shell_sld",5e-7)
	137	self.comp.setParam("thickness",30.0 )
	138	self.comp.setParam("Background", 0.001)
	139
	140	self.x = numpy.array([0.4, 1.3])
	141	self.y = numpy.array([0.5, 1.57])
	142	self.x_array = self.comp.evalDistribution(self.x)
	143	self.y_array = self.comp.evalDistribution(self.y)
[64f0c5d]	144	#qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	145	#qy_prime = numpy.reshape(self.y, [len(self.y),1])
	146	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	147
	148	def test1D(self):
	149	""" Test 1D model for a Vesicle Model """
	150	self.assertAlmostEquals(self.comp.run(0.001), 1.71399e4,1)
	151
	152	def test1D_2(self):
	153	""" Test 2D model for a Vesicle Model"""
	154	self.assertAlmostEquals(self.comp.run([0.001, 1.3]), 1.71399e4,1)
	155
	156	def testEval_1D(self):
	157	""" Test 1D model for a Vesicle with evalDistribution"""
	158	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	159	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	160
	161	def testEval_2D(self):
	162	""" Test 2D model for a Vesicle with evalDistribution"""
[64f0c5d]	163	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	164	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	165
[9ce41c6]	166
[7ef319e]	167	def testCriticalPoint(self):
	168	""" Test vesicle at the critical point"""
	169	self.assert_(numpy.isfinite(self.comp.run(0.0)))
	170
	171
[9ce41c6]	172	class TestBinaryHSModel(unittest.TestCase):
	173	""" Unit tests for BinaryHS Model"""
	174
	175	def setUp(self):
	176	from sans.models.BinaryHSModel import BinaryHSModel
	177	self.comp = BinaryHSModel()
	178	#Give initial value to model
	179	self.comp.setParam("l_radius", 100.0)
	180	self.comp.setParam("ls_sld", 3.5e-6)
	181	self.comp.setParam("s_radius",25)
	182	self.comp.setParam("solvent_sld",6.36e-6 )
	183	self.comp.setParam("ss_sld", 5e-7)
	184	self.comp.setParam("vol_frac_ss", 0.1)
	185	self.comp.setParam("vol_frac_ls", 0.2)
	186	self.comp.setParam("Background", 0.001)
	187
	188	self.x = numpy.array([0.4, 1.3])
	189	self.y = numpy.array([0.5, 1.57])
	190	self.x_array = self.comp.evalDistribution(self.x)
	191	self.y_array = self.comp.evalDistribution(self.y)
[64f0c5d]	192	#qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	193	#qy_prime = numpy.reshape(self.y, [len(self.y),1])
	194	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	195
	196	def test1D(self):
	197	""" Test 1D model for a BinaryHS Model"""
	198	self.assertAlmostEquals(self.comp.run(0.001),60.6785, 4)
	199
	200	def test1D_2(self):
	201	""" Test 2D model for a BinaryHS Model"""
	202	self.assertAlmostEquals(self.comp.run([0.001, 1.3]),60.6785, 4)
	203
	204	def testEval_1D(self):
	205	""" Test 1D model for a BinaryHS with evalDistribution"""
	206	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	207	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	208
	209	def testEval_2D(self):
	210	""" Test 2D model for a BinaryHS with evalDistribution"""
[64f0c5d]	211	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	212	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	213
	214	# No more singular point
	215	#def testCriticalPoint(self):
	216	# """ Test BinaryHS at the critical point"""
	217	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[7ef319e]	218
[9ce41c6]	219
	220	class TestCoreShellCylinderModel(unittest.TestCase):
	221	""" Unit tests for CoreShellCylinder Model"""
	222
	223	def setUp(self):
	224	from sans.models.CoreShellCylinderModel import CoreShellCylinderModel
	225	self.comp = CoreShellCylinderModel()
	226	#Give initial value to model
	227	self.comp.setParam("scale", 1.0)
	228	self.comp.setParam("core_sld", 1e-6)
	229	self.comp.setParam("length", 400)
	230	self.comp.setParam("radius",20)
	231	self.comp.setParam("solvent_sld",1e-6 )
	232	self.comp.setParam("shell_sld", 4e-6)
	233	self.comp.setParam("thickness", 10.0)
	234	self.comp.setParam("Background", 0.01)
	235
	236	self.x = numpy.array([0.4, 1.3])
	237	self.y = numpy.array([0.5, 1.57])
	238	self.x_array = self.comp.evalDistribution(self.x)
	239	self.y_array = self.comp.evalDistribution(self.y)
	240
	241	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	242	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	243	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	244
	245	self.q = 0.001
	246	self.phi= math.pi/2
	247	self.qx= self.q*math.cos(self.phi)
	248	self.qy= self.q*math.sin(self.phi)
	249
	250	def test1D(self):
	251	""" Test 1D model for a CoreShellCylinder Model"""
	252	self.assertAlmostEqual(self.comp.run(0.001), 353.56,1)
	253
	254	def test1D_2(self):
	255	""" Test 2D model for a CoreShellCylinder Model"""
	256	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	257	self.comp.runXY([self.qx, self.qy]),1)
	258
	259	def testEval_1D(self):
	260	""" Test 1D model for a CoreShellCylinder with evalDistribution"""
	261	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	262	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	263
	264	def testEval_2D(self):
	265	""" Test 2D model for a CoreShellCylinder with evalDistribution"""
[64f0c5d]	266	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	267	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	268
	269	# No more singular point
	270	#def testCriticalPoint(self):
	271	# """ Test CoreShellCylinder at the critical point"""
	272	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[7ef319e]	273
[543d1bd]	274
	275	class TestCoreShellBicelleModel(unittest.TestCase):
	276	""" Unit tests for CoreShellBicelle Model"""
	277
	278	def setUp(self):
	279	from sans.models.CoreShellCylinderModel import CoreShellCylinderModel
	280	from sans.models.CoreShellBicelleModel import CoreShellBicelleModel
	281	self.comp1 = CoreShellCylinderModel()
	282	self.comp2 = CoreShellBicelleModel()
	283	# Using the default values of CSBiselle is same as CSCylinder
	284
	285	def testcompare1D(self):
	286	""" Test 1D model for a CoreShellBicelle Model"""
	287	self.assertAlmostEqual(self.comp1.run(0.01), self.comp2.run(0.01), 8)
	288
	289	def testcompareEval_2D(self):
	290	""" Test 2D model for a CoreShellBicelle with evalDistribution"""
	291	self.assertAlmostEquals(self.comp1.runXY([0.4, 0.5]),self.comp2.runXY([0.4, 0.5]),8)
	292	self.assertAlmostEquals(self.comp1.runXY([1.3,1.57]),self.comp2.runXY([1.3,1.57]),8)
	293
	294
[9ce41c6]	295	class TestHollowCylinderModel(unittest.TestCase):
	296	""" Unit tests for HollowCylinder Model"""
	297
	298	def setUp(self):
	299	from sans.models.HollowCylinderModel import HollowCylinderModel
	300	self.comp = HollowCylinderModel()
	301	#Give initial value to model
	302	self.comp.setParam("scale", 1.0)
	303	self.comp.setParam("core_radius",20.0)
	304	self.comp.setParam("radius",30)
	305	self.comp.setParam("length", 400)
[64f0c5d]	306	self.comp.setParam("sldCyl",6.3e-6 )
	307	self.comp.setParam("sldSolv",1e-6 )
[9ce41c6]	308	self.comp.setParam("Background", 0.01)
	309
	310	self.x = numpy.array([0.4, 1.3])
	311	self.y = numpy.array([0.5, 1.57])
	312	self.x_array = self.comp.evalDistribution(self.x)
	313	self.y_array = self.comp.evalDistribution(self.y)
	314	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	315	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	316	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	317
	318	self.q = 0.001
	319	self.phi= math.pi/2
	320	self.qx= self.q*math.cos(self.phi)
	321	self.qy= self.q*math.sin(self.phi)
	322
	323	def test1D(self):
	324	""" Test 1D model for a HollowCylinder Model"""
	325	self.assertAlmostEqual(self.comp.run(0.001), 1756.76, 1)
	326
	327	def test1D_2(self):
	328	""" Test 2D model for a HollowCylinder Model"""
	329	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	330	self.comp.runXY([self.qx, self.qy]),1)
	331
	332	def testEval_1D(self):
	333	""" Test 1D model for a HollowCylinder with evalDistribution"""
	334	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	335	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	336
	337	def testEval_2D(self):
	338	""" Test 2D model for a HollowCylinder with evalDistribution"""
[64f0c5d]	339	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
[543d1bd]	340	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1],8)
[64f0c5d]	341
	342	# No more singular point
	343	#def testCriticalPoint(self):
	344	# """ Test HollowCylinder at the critical point"""
	345	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[7ef319e]	346
[9ce41c6]	347
	348	class TestFlexibleCylinderModel(unittest.TestCase):
	349	""" Unit tests for FlexibleCylinder Model"""
	350
	351	def setUp(self):
	352	from sans.models.FlexibleCylinderModel import FlexibleCylinderModel
	353	self.comp = FlexibleCylinderModel()
	354	#Give initial value to model
	355	self.comp.setParam("scale", 1.0)
[64f0c5d]	356	self.comp.setParam("sldSolv",6.3e-6 )
	357	self.comp.setParam("sldCyl",1e-6 )
[9ce41c6]	358	self.comp.setParam("kuhn_length",100)
	359	self.comp.setParam("length", 1000)
	360	self.comp.setParam("radius",20)
	361	self.comp.setParam("Background", 0.0001)
	362
	363	self.x = numpy.array([0.4, 1.3])
	364	self.y = numpy.array([0.5, 1.57])
	365	self.x_array = self.comp.evalDistribution(self.x)
	366	self.y_array = self.comp.evalDistribution(self.y)
	367
	368	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	369	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	370	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	371
	372	self.q = 0.001
	373	self.phi= math.pi/2
	374	self.qx= self.q*math.cos(self.phi)
	375	self.qy= self.q*math.sin(self.phi)
	376
	377	def test1D(self):
	378	""" Test 1D model for a FlexibleCylinder Model"""
	379	self.assertAlmostEqual(self.comp.run(0.001), 3509.22, 1)
	380
	381	def test1D_2(self):
	382	""" Test 2D model for a FlexibleCylinder Model"""
	383	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	384	self.comp.runXY([self.qx, self.qy]),1)
	385	def testEval_1D(self):
	386	""" Test 1D model for a FlexibleCylinder Model with evalDistribution"""
	387	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	388	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	389
	390	def testEval_2D(self):
	391	""" Test 2D model for a FlexibleCylinder Model with evalDistribution"""
[64f0c5d]	392	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	393	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	394
	395	# No more singular point
	396	#def testCriticalPoint(self):
	397	# """ Test FlexibleCylinder at the critical point"""
	398	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	399
[8677607]	400	class TestFlexCylEllipXModel(unittest.TestCase):
	401	""" Unit tests for FlexCylEllipXModel"""
	402
	403	def setUp(self):
	404	from sans.models.FlexCylEllipXModel import FlexCylEllipXModel
	405	self.comp = FlexCylEllipXModel()
	406	#Give initial value to model
	407	self.comp.setParam("scale", 1.0)
	408	self.comp.setParam("sldSolv",6.3e-6 )
	409	self.comp.setParam("sldCyl",1e-6 )
	410	self.comp.setParam("kuhn_length",100)
	411	self.comp.setParam("length", 1000)
	412	self.comp.setParam("radius",20)
	413	self.comp.setParam("background", 0.0001)
	414	self.comp.setParam("axis_ratio", 1.0)
	415
	416	self.x = numpy.array([0.4, 1.3])
	417	self.y = numpy.array([0.5, 1.57])
	418	self.x_array = self.comp.evalDistribution(self.x)
	419	self.y_array = self.comp.evalDistribution(self.y)
	420
	421	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	422	qy_prime = numpy.reshape(self.y, [len(self.y),1])
	423	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
	424
	425	self.q = 0.001
	426	self.phi= math.pi/2
	427	self.qx= self.q*math.cos(self.phi)
	428	self.qy= self.q*math.sin(self.phi)
	429
	430	def test1D(self):
	431	""" Test 1D model for FlexCylEllipXModel"""
	432	self.assertAlmostEqual(self.comp.run(0.001), 3509.22, 1)
	433
	434	def test1D_2(self):
	435	""" Test 2D model for FlexCylEllipXModel"""
	436	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	437	self.comp.runXY([self.qx, self.qy]),1)
	438	def testEval_1D(self):
	439	""" Test 1D model for FlexCylEllipXModel with evalDistribution"""
	440	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	441	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	442
	443	def testEval_2D(self):
	444	""" Test 2D model for FlexCylEllipXModel with evalDistribution"""
	445	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	446	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	447
[9ce41c6]	448
	449	class TestStackedDisksModel(unittest.TestCase):
	450	""" Unit tests for StackedDisks Model"""
	451
	452	def setUp(self):
	453	from sans.models.StackedDisksModel import StackedDisksModel
	454	self.comp = StackedDisksModel()
	455	#Give initial value to model
	456	self.comp.setParam("scale", 0.01 )
	457	self.comp.setParam("radius",3000.0 )
	458	self.comp.setParam("core_thick", 10.0)
	459	self.comp.setParam("layer_thick",15.0 )
	460	self.comp.setParam("core_sld",4e-006 )
	461	self.comp.setParam("layer_sld",-4e-007 )
	462	self.comp.setParam("solvent_sld", 5e-006 )
	463	self.comp.setParam("n_stacking",1.0 )
	464	self.comp.setParam("sigma_d", 0.0)
	465	self.comp.setParam("background",0.001)
	466	self.comp.setParam("axis_theta", 0.0 )
	467	self.comp.setParam("axis_phi",0.0)
	468
	469	self.x = numpy.array([0.4, 1.3])
	470	self.y = numpy.array([0.5, 1.57])
	471	self.x_array = self.comp.evalDistribution(self.x)
	472	self.y_array = self.comp.evalDistribution(self.y)
	473
	474	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	475	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	476	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	477
	478	self.q = 0.001
	479	self.phi= math.pi/2
	480	self.qx= self.q*math.cos(self.phi)
	481	self.qy= self.q*math.sin(self.phi)
	482
	483	def test1D(self):
	484	""" Test 1D model for a StackedDisks Model"""
	485	self.assertAlmostEqual(self.comp.run(0.001), 5075.12, 1)
	486
	487	def test1D_2(self):
	488	""" Test 2D model for a StackedDisks Model"""
	489	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	490	self.comp.runXY([self.qx, self.qy]),1)
	491
	492	def testEval_1D(self):
	493	""" Test 1D model for a StackedDisks Model with evalDistribution"""
	494	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	495	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	496
	497	def testEval_2D(self):
	498	""" Test 2D model for a StackedDisks Model with evalDistribution"""
[64f0c5d]	499	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	500	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	501
	502	# No more singular point
	503	#def testCriticalPoint(self):
	504	# """ Test StackedDisks at the critical point"""
	505	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[7ef319e]	506
[9ce41c6]	507
	508	class TestParallelepipedModel(unittest.TestCase):
	509	""" Unit tests for Parallelepiped Model"""
	510
	511	def setUp(self):
	512	from sans.models.ParallelepipedModel import ParallelepipedModel
	513	self.comp = ParallelepipedModel()
	514	#Give initial value to model
	515	self.comp.setParam("background", 0.0 )
	516	self.comp.setParam("short_a",35)
	517	self.comp.setParam("short_b", 75)
	518	self.comp.setParam("long_c",400 )
[64f0c5d]	519	self.comp.setParam("sldPipe", 6.3e-006 )
	520	self.comp.setParam("sldSolv", 1e-006 )
[9ce41c6]	521	self.comp.setParam("scale",1.0 )
	522
	523	self.x = numpy.array([0.4, 1.3])
	524	self.y = numpy.array([0.5, 1.57])
	525	self.x_array = self.comp.evalDistribution(self.x)
	526	self.y_array = self.comp.evalDistribution(self.y)
	527
	528	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	529	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	530	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	531
	532	self.q = 0.001
	533	self.phi= math.pi/2
	534	self.qx= self.q*math.cos(self.phi)
	535	self.qy= self.q*math.sin(self.phi)
	536
	537
	538	def test1D(self):
	539	""" Test 1D model for a Parallelepiped Model"""
	540	self.assertAlmostEqual(self.comp.run(0.001), 2935.82, 2)
	541
	542	def test1D_2(self):
	543	""" Test 2D model for a Parallelepiped Model"""
	544	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	545	self.comp.runXY([self.qx, self.qy]),1)
	546
	547	def testEval_1D(self):
	548	""" Test 1D model for a Parallelepiped Model with evalDistribution"""
	549	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	550	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	551
	552	def testEval_2D(self):
	553	""" Test 2D model for a Parallelepiped Model with evalDistribution"""
[64f0c5d]	554	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	555	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	556
[9ce41c6]	557
[7ef319e]	558	def testCriticalPoint(self):
	559	""" Test Parallelepiped at the critical point"""
	560	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	561
	562	class TestEllipticalCylinderModel(unittest.TestCase):
	563	""" Unit tests for EllipticalCylinder Model"""
	564
	565	def setUp(self):
	566	from sans.models.EllipticalCylinderModel import EllipticalCylinderModel
	567	self.comp = EllipticalCylinderModel()
	568	self.comp.setParam("scale",1.0)
	569	self.comp.setParam("r_minor",20.0)
	570	self.comp.setParam("r_ratio",1.5)
	571	self.comp.setParam("length",400.0)
[64f0c5d]	572	self.comp.setParam("sldCyl",4e-006)
	573	self.comp.setParam("sldSolv",1e-006)
[9ce41c6]	574	self.comp.setParam("background",0.0)
	575	self.comp.setParam("cyl_theta",0.0)
	576	self.comp.setParam("cyl_phi",0.0)
	577	self.comp.setParam("cyl_psi",0.0)
	578
	579	self.x = numpy.array([0.4, 1.3])
	580	self.y = numpy.array([0.5, 1.57])
	581	self.x_array = self.comp.evalDistribution(self.x)
	582	self.y_array = self.comp.evalDistribution(self.y)
	583
	584	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	585	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	586	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	587
	588	self.q = 0.001
	589	self.phi= math.pi/2
	590	self.qx= self.q*math.cos(self.phi)
	591	self.qy= self.q*math.sin(self.phi)
	592
	593	def test1D(self):
	594	""" Test 1D model for a EllipticalCylinder Model"""
[64f0c5d]	595	self.assertAlmostEqual(self.comp.run(0.001), 675.504402, 4)
[9ce41c6]	596
	597	def test1D_2(self):
	598	""" Test 2D model for a EllipticalCylinder Model"""
	599	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	600	self.comp.runXY([self.qx, self.qy]),1)
	601
	602	def testEval_1D(self):
	603	""" Test 1D model for a EllipticalCylinder with evalDistribution"""
	604	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	605	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	606
	607	def testEval_2D(self):
	608	""" Test 2D model for a EllipticalCylinder with evalDistribution"""
[64f0c5d]	609	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	610	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	611
[7ef319e]	612
	613	def testCriticalPoint(self):
	614	""" Test EllipticalCylinder at the critical point"""
	615	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	616
	617
	618	class TestEllipsoidModel(unittest.TestCase):
	619	""" Unit tests for Ellipsoid Model"""
	620
	621	def setUp(self):
	622	from sans.models.EllipsoidModel import EllipsoidModel
	623	self.comp = EllipsoidModel()
	624	self.comp.setParam("scale",1.0)
	625	self.comp.setParam("radius_a",20.0)
	626	self.comp.setParam("radius_b",400.0)
[64f0c5d]	627	self.comp.setParam("sldEll",4e-006)
	628	self.comp.setParam("sldSolv",1e-006)
[9ce41c6]	629	self.comp.setParam("background",0.0)
	630	self.comp.setParam("axis_theta",1.57)
	631	self.comp.setParam("axis_phi",0.0)
	632
	633	self.x = numpy.array([0.4, 1.3])
	634	self.y = numpy.array([0.5, 1.57])
	635	self.x_array = self.comp.evalDistribution(self.x)
	636	self.y_array = self.comp.evalDistribution(self.y)
	637
	638	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	639	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	640	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	641
	642	self.q = 0.001
	643	self.phi= math.pi/2
	644	self.qx= self.q*math.cos(self.phi)
	645	self.qy= self.q*math.sin(self.phi)
	646
	647	def test1D(self):
	648	""" Test 1D model for a Ellipsoid Model"""
	649	self.assertAlmostEqual(self.comp.run(1.0), 0.000733968, 4)
	650
	651	def test1D_2(self):
	652	""" Test 2D model for a Ellipsoid Model"""
	653	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	654	self.comp.runXY([self.qx, self.qy]),1)
	655	def testEval_1D(self):
	656	""" Test 1D model for a Ellipsoid Model with evalDistribution"""
	657	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	658	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	659
	660	def testEval_2D(self):
	661	""" Test 2D model for a Ellipsoid Model with evalDistribution"""
[64f0c5d]	662	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	663	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	664
[7ef319e]	665
	666	def testCriticalPoint(self):
	667	""" Test Ellipsoid at the critical point"""
	668	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	669
	670	class TestCoreShellEllipsoidModel(unittest.TestCase):
	671	""" Unit tests for CoreShellEllipsoid Model"""
	672
	673	def setUp(self):
	674	from sans.models.CoreShellEllipsoidModel import CoreShellEllipsoidModel
	675	self.comp = CoreShellEllipsoidModel()
	676	#Give initial value to model
	677	self.comp.setParam("scale", 1.0)
	678	self.comp.setParam("equat_core", 200.0)
	679	self.comp.setParam("polar_core", 20.0)
	680	self.comp.setParam("equat_shell",250.0)
	681	self.comp.setParam("polar_shell", 30.0)
[64f0c5d]	682	self.comp.setParam("sld_shell",1e-006)
	683	self.comp.setParam("sld_core",2e-006)
[9ce41c6]	684	self.comp.setParam("sld_solvent",6.3e-006)
	685	self.comp.setParam("background",0.001)
	686	self.comp.setParam("axis_theta", 0.0)
	687	self.comp.setParam("axis_phi",0.0)
	688
	689	self.x = numpy.array([0.4, 1.3])
	690	self.y = numpy.array([0.5, 1.57])
	691	self.x_array = self.comp.evalDistribution(self.x)
	692	self.y_array = self.comp.evalDistribution(self.y)
	693
	694	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	695	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	696	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	697
	698	self.q = 0.001
	699	self.phi= math.pi/2
	700	self.qx= self.q*math.cos(self.phi)
	701	self.qy= self.q*math.sin(self.phi)
	702
	703	def test1D(self):
	704	""" Test 1D model for a CoreShellEllipsoid Model"""
[64f0c5d]	705	self.assertAlmostEqual(self.comp.run(1.0), 0.001894, 4)
[9ce41c6]	706
	707	def test1D_2(self):
	708	""" Test 2D model for a CoreShellEllipsoid Model"""
	709	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	710	self.comp.runXY([self.qx, self.qy]),1)
	711
	712	def testEval_1D(self):
	713	""" Test 1D model for a CoreShellEllipsoid with evalDistribution"""
	714	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	715	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	716
	717	def testEval_2D(self):
	718	""" Test 2D model for a CoreShellEllipsoid with evalDistribution"""
[64f0c5d]	719	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	720	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	721
[7ef319e]	722
	723	def testCriticalPoint(self):
	724	""" Test CoreShellEllipsoid at the critical point"""
	725	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	726
	727	class TestTriaxialEllipsoidModel(unittest.TestCase):
	728	""" Unit tests for TriaxialEllipsoid Model"""
	729
	730	def setUp(self):
	731	from sans.models.TriaxialEllipsoidModel import TriaxialEllipsoidModel
	732	self.comp = TriaxialEllipsoidModel()
	733	self.comp.setParam("scale",1.0)
	734	self.comp.setParam("semi_axisA",35.0)
	735	self.comp.setParam("semi_axisB", 100.0)
	736	self.comp.setParam("semi_axisC",400.0 )
[64f0c5d]	737	self.comp.setParam("sldSolv",6.3e-6)
	738	self.comp.setParam("sldEll",1e-6)
[9ce41c6]	739	self.comp.setParam("background",0.0)
	740	self.comp.setParam("axis_theta", 1.0)
	741	self.comp.setParam("axis_phi",0.0 )
	742	self.comp.setParam("axis_psi",0.0 )
	743
	744	self.x = numpy.array([0.4, 1.3])
	745	self.y = numpy.array([0.5, 1.57])
	746
	747	self.x_array = self.comp.evalDistribution(self.x)
	748	self.y_array = self.comp.evalDistribution(self.y)
	749	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	750	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	751	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	752
	753	self.q = 0.001
	754	self.phi= math.pi/2
	755	self.qx= self.q*math.cos(self.phi)
	756	self.qy= self.q*math.sin(self.phi)
	757
	758
	759	def test1D(self):
	760	""" Test 1D model for a TriaxialEllipsoid Model"""
	761	self.assertAlmostEquals(self.comp.run(0.001),16285.6, 1)
	762
	763	def test1D_2(self):
	764	""" Test 2D model for a TriaxialEllipsoid Model"""
	765	self.assertAlmostEqual(self.comp.run([self.q, self.phi]),
	766	self.comp.runXY([self.qx, self.qy]),1)
	767
	768	def testEval_1D(self):
	769	""" Test 1D model for a TriaxialEllipsoid Model with evalDistribution"""
	770	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	771	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	772
	773	def testEval_2D(self):
	774	""" Test 2D model for a TriaxialEllipsoid Model with evalDistribution"""
[64f0c5d]	775	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	776	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	777
[7ef319e]	778
	779	def testCriticalPoint(self):
	780	""" Test TriaxialEllipsoid at the critical point"""
	781	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	782
	783	class TestLamellarModel(unittest.TestCase):
	784	""" Unit tests for Lamellar Model"""
	785
	786	def setUp(self):
	787	from sans.models.LamellarModel import LamellarModel
	788	self.comp = LamellarModel()
	789	self.comp.setParam("scale",1.0)
	790	self.comp.setParam("bi_thick",50.0)
	791	self.comp.setParam("sld_bi",1e-006)
	792	self.comp.setParam("sld_sol",6.3e-006)
	793	self.comp.setParam("background",0.0)
	794
	795	self.x = numpy.array([0.4, 1.3])
	796	self.y = numpy.array([0.5, 1.57])
	797
	798	self.x_array = self.comp.evalDistribution(self.x)
	799	self.y_array = self.comp.evalDistribution(self.y)
	800	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	801	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	802	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	803
	804	def test1D(self):
	805	""" Test 1D model for a Lamellar Model"""
[64f0c5d]	806	self.assertAlmostEquals(self.comp.run(0.001), 882289.54309, 3)
[9ce41c6]	807
	808	def test1D_2(self):
	809	""" Test 2D model for a Lamellar Model"""
[64f0c5d]	810	self.assertAlmostEquals(self.comp.run([0.001, 1.3]),882289.54309, 3)
[9ce41c6]	811
	812	def testEval_1D(self):
	813	""" Test 1D model for a Lamellar Model with evalDistribution"""
	814	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	815	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	816
	817	def testEval_2D(self):
	818	""" Test 2D model for a Lamellar Model with evalDistribution"""
[64f0c5d]	819	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	820	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	821
	822	# No more singular point
	823	#def testCriticalPoint(self):
	824	# """ Test Lamellar at the critical point"""
	825	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	826
	827	class TestLamellarFFHGModel(unittest.TestCase):
	828	""" Unit tests for LamellarFFHG Model"""
	829
	830	def setUp(self):
	831	from sans.models.LamellarFFHGModel import LamellarFFHGModel
	832	self.comp = LamellarFFHGModel()
	833	self.comp.setParam("scale",1.0)
	834	self.comp.setParam("t_length",15.0)
	835	self.comp.setParam("h_thickness",10.0)
	836	self.comp.setParam("sld_tail",4e-007)
	837	self.comp.setParam("sld_head",3e-006)
	838	self.comp.setParam("sld_solvent",6e-006)
	839	self.comp.setParam("background",0.0)
	840
	841	self.x = numpy.array([0.4, 1.3])
	842	self.y = numpy.array([0.5, 1.57])
	843
	844	self.x_array = self.comp.evalDistribution(self.x)
	845	self.y_array = self.comp.evalDistribution(self.y)
	846	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	847	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	848	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	849
	850
	851	def test1D(self):
	852	""" Test 1D model for a LamellarFFHG Model"""
[64f0c5d]	853	self.assertAlmostEquals(self.comp.run(0.001),653143.9209, 3)
[9ce41c6]	854
	855	def test1D_2(self):
	856	""" Test 2D model for a LamellarFFHG Model"""
[64f0c5d]	857	self.assertAlmostEquals(self.comp.run([0.001, 1.3]),653143.9209, 3)
[9ce41c6]	858
	859	def testEval_1D(self):
	860	""" Test 1D model for a LamellarFFHG Model with evalDistribution"""
	861	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	862	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	863
	864	def testEval_2D(self):
	865	""" Test 2D model for a LamellarFFHG Model with evalDistribution"""
[64f0c5d]	866	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	867	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	868
	869	# No more singular point
	870	#def testCriticalPoint(self):
	871	# """ Test LamellarFFHG at the critical point"""
	872	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	873
	874	class TestLamellarPSModel(unittest.TestCase):
	875	""" Unit tests for LamellarPS Model"""
	876
	877	def setUp(self):
	878	from sans.models.LamellarPSModel import LamellarPSModel
	879	self.comp = LamellarPSModel()
	880	self.comp.setParam("scale",1.0)
	881	self.comp.setParam("spacing",400.0)
	882	self.comp.setParam("delta",30.0)
[64f0c5d]	883	self.comp.setParam("sld_bi",6.3e-006)
	884	self.comp.setParam("sld_sol",1e-006)
[9ce41c6]	885	self.comp.setParam("n_plates",20.0)
	886	self.comp.setParam("caille", 0.1)
	887	self.comp.setParam("background",0.0)
	888
	889	self.x = numpy.array([0.4, 1.3])
	890	self.y = numpy.array([0.5, 1.57])
	891
	892	self.x_array = self.comp.evalDistribution(self.x)
	893	self.y_array = self.comp.evalDistribution(self.y)
	894	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	895	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	896	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	897
	898
	899	def test1D(self):
	900	""" Test 1D model for a LamellarPS Model"""
[64f0c5d]	901	self.assertAlmostEquals(self.comp.run(0.001), 27899.30836, 1)
[9ce41c6]	902
	903	def test1D_2(self):
	904	""" Test 2D model for a LamellarPS Model"""
[64f0c5d]	905	self.assertAlmostEquals(self.comp.run([0.001, 1.3]),27899.30836, 1)
[9ce41c6]	906
	907	def testEval_1D(self):
	908	""" Test 1D model for a LamellarPS Model with evalDistribution"""
	909	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	910	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	911
	912	def testEval_2D(self):
	913	""" Test 2D model for a LamellarPS Model with evalDistribution"""
[64f0c5d]	914	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	915	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	916
	917	# No more singular point
	918	#def testCriticalPoint(self):
	919	# """ Test LamellarPS at the critical point"""
	920	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	921
	922	class TestLamellarPSHGModel(unittest.TestCase):
	923	""" Unit tests for LamellarPSHG Model"""
	924
	925	def setUp(self):
	926	from sans.models.LamellarPSHGModel import LamellarPSHGModel
	927	self.comp = LamellarPSHGModel()
	928	self.comp.setParam("scale",1.0)
	929	self.comp.setParam("spacing",40.0)
	930	self.comp.setParam("deltaT",10.0)
	931	self.comp.setParam("deltaH",2.0)
	932	self.comp.setParam("sld_tail",4e-7)
	933	self.comp.setParam("sld_head",2e-6)
	934	self.comp.setParam("sld_solvent",6e-6)
	935	self.comp.setParam("n_plates",30)
	936	self.comp.setParam("caille",0.001)
	937	self.comp.setParam("background",0.001)
	938
	939	self.x = numpy.array([0.4, 1.3])
	940	self.y = numpy.array([0.5, 1.57])
	941
	942	self.x_array = self.comp.evalDistribution(self.x)
	943	self.y_array = self.comp.evalDistribution(self.y)
	944	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	945	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	946	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	947
	948	def test1D(self):
	949	""" Test 1D model for a LamellarPSHG Model"""
[64f0c5d]	950	self.assertAlmostEquals(self.comp.run(0.001),6831387.29466, 3)
[9ce41c6]	951
	952	def test1D_2(self):
	953	""" Test 2D model for a LamellarPSHG Model"""
[64f0c5d]	954	self.assertAlmostEquals(self.comp.run([0.001, 1.3]),6831387.29466,3)
[9ce41c6]	955
	956	def testEval_1D(self):
	957	""" Test 1D model for a LamellarPSHG Model with evalDistribution"""
	958	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	959	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	960
	961	def testEval_2D(self):
	962	""" Test 2D model for a LamellarPSHG Model with evalDistribution"""
[64f0c5d]	963	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	964	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	965
	966	# No more singular point
	967	#def testCriticalPoint(self):
	968	# """ Test LamellarPSHG at the critical point"""
	969	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	970
	971	class TestSquareWellStructure(unittest.TestCase):
	972	""" Unit tests for SquareWellStructure """
	973
	974	def setUp(self):
	975	from sans.models.SquareWellStructure import SquareWellStructure
	976	self.comp = SquareWellStructure()
	977	self.comp.setParam("effect_radius",50.0)
	978	self.comp.setParam("volfraction",0.04)
	979	self.comp.setParam("welldepth",1.5 )
	980	self.comp.setParam("wellwidth",1.2)
	981
	982	self.x = numpy.array([0.4, 1.3])
	983	self.y = numpy.array([0.5, 1.57])
	984
	985	self.x_array = self.comp.evalDistribution(self.x)
	986	self.y_array = self.comp.evalDistribution(self.y)
	987	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	988	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	989	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	990
	991
	992	def test1D(self):
	993	""" Test 1D model for a SquareWellStructure"""
	994	self.assertAlmostEqual(self.comp.run(0.001), 0.976657, 2)
	995
	996	def test1D_2(self):
	997	""" Test 2D model for a SquareWellStructure"""
	998	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.9776657,2)
	999
	1000	def testEval_1D(self):
	1001	""" Test 1D model for a SquareWellStructure with evalDistribution"""
	1002	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1003	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1004
	1005	def testEval_2D(self):
	1006	""" Test 2D model for a SquareWellStructure with evalDistribution"""
[64f0c5d]	1007	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1008	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1009
	1010	# No more singular point
	1011	#def testCriticalPoint(self):
	1012	# """ Test SquareWellStructure at the critical point"""
	1013	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1014
	1015	class TestHardsphereStructure(unittest.TestCase):
	1016	""" Unit tests for HardsphereStructure"""
	1017
	1018	def setUp(self):
	1019	from sans.models.HardsphereStructure import HardsphereStructure
	1020	self.comp = HardsphereStructure()
	1021	self.comp.setParam("effect_radius",50.0)
	1022	self.comp.setParam("volfraction", 0.2)
	1023	self.x = numpy.array([0.4, 1.3])
	1024	self.y = numpy.array([0.5, 1.57])
	1025
	1026	self.x_array = self.comp.evalDistribution(self.x)
	1027	self.y_array = self.comp.evalDistribution(self.y)
	1028	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1029	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1030	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1031
	1032
	1033	def test1D(self):
	1034	""" Test 1D model for a HardsphereStructure"""
	1035	self.assertAlmostEqual(self.comp.run(0.001),0.209128, 4)
	1036
	1037	def test1D_2(self):
	1038	""" Test 2D model for a HardsphereStructure"""
	1039	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.209128, 4)
	1040
	1041	def testEval_1D(self):
	1042	""" Test 1D model for a HardsphereStructure with evalDistribution"""
	1043	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1044	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1045
	1046	def testEval_2D(self):
	1047	""" Test 2D model for a HardsphereStructure with evalDistribution"""
[64f0c5d]	1048	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1049	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1050
	1051	# No more singular point
	1052	#def testCriticalPoint(self):
	1053	# """ Test HardsphereStructure at the critical point"""
	1054	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1055
	1056	class TestStickyHSStructure(unittest.TestCase):
	1057	""" Unit tests for StickyHSStructure"""
	1058
	1059	def setUp(self):
	1060	from sans.models.StickyHSStructure import StickyHSStructure
	1061	self.comp = StickyHSStructure()
	1062	self.comp.setParam("effect_radius",50.0)
	1063	self.comp.setParam("volfraction",0.1)
	1064	self.comp.setParam("perturb",0.05)
	1065	self.comp.setParam("stickiness",0.2)
	1066
	1067	self.x = numpy.array([0.4, 1.3])
	1068	self.y = numpy.array([0.5, 1.57])
	1069
	1070	self.x_array = self.comp.evalDistribution(self.x)
	1071	self.y_array = self.comp.evalDistribution(self.y)
	1072	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1073	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1074	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1075
	1076	def test1D(self):
	1077	""" Test 1D model for a StickyHSStructure"""
	1078	self.assertAlmostEqual(self.comp.run(0.001),1.09718, 4)
	1079
	1080	def test1D_2(self):
	1081	""" Test 2D model for a StickyHSStructure"""
	1082	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),1.09718, 4)
	1083
	1084	def testEval_1D(self):
	1085	""" Test 1D model for a StickyHSStructure with evalDistribution"""
	1086	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1087	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1088
	1089	def testEval_2D(self):
	1090	""" Test 2D model for a StickyHSStructure with evalDistribution"""
[64f0c5d]	1091	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1092	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1093
	1094	# No more singular point
	1095	#def testCriticalPoint(self):
	1096	# """ Test StickyHSStructure at the critical point"""
	1097	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1098
	1099	class TestHayterMSAStructure(unittest.TestCase):
	1100	""" Unit tests for HayterMSAStructure"""
	1101
	1102	def setUp(self):
	1103	from sans.models.HayterMSAStructure import HayterMSAStructure
	1104	self.comp = HayterMSAStructure()
	1105	self.comp.setParam("effect_radius",20.75)
	1106	self.comp.setParam("charge",19.0)
	1107	self.comp.setParam("volfraction",0.0192 )
	1108	self.comp.setParam("temperature",298)
	1109	self.comp.setParam("saltconc",0.0)
	1110	self.comp.setParam("dielectconst",78)
	1111
	1112	self.x = numpy.array([0.4, 1.3])
	1113	self.y = numpy.array([0.5, 1.57])
	1114
	1115	self.x_array = self.comp.evalDistribution(self.x)
	1116	self.y_array = self.comp.evalDistribution(self.y)
	1117	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1118	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1119	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1120
	1121	def test1D(self):
	1122	""" Test 1D model for a HayterMSAStructure"""
	1123	self.assertAlmostEqual(self.comp.run(0.001),0.0712928, 4)
	1124
	1125	def test1D_2(self):
	1126	""" Test 2D model for a HayterMSAStructure"""
	1127	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.0712928, 4)
	1128
	1129	def testEval_1D(self):
	1130	""" Test 1D model for a HayterMSAStructure with evalDistribution"""
[dd0d059]	1131	self.assertTrue(math.fabs(self.comp.run(0.4)-self.x_array[0])<0.025, "Difference too big: %g" % math.fabs(self.comp.run(0.4)-self.x_array[0]))
	1132	self.assertTrue(math.fabs(self.comp.run(1.3)-self.x_array[1])<0.025, "Difference too big: %g" % math.fabs(self.comp.run(1.3)-self.x_array[1]))
[9ce41c6]	1133
	1134	def testEval_2D(self):
	1135	""" Test 2D model for a HayterMSAStructure with evalDistribution"""
[dd0d059]	1136	self.assertTrue(math.fabs(self.comp.runXY([0.4, 0.5])-self.xy_matrix[0])<0.05, "Difference too big: %g" % math.fabs(self.comp.runXY([0.4, 0.5])-self.xy_matrix[0]))
	1137	self.assertTrue(math.fabs(self.comp.runXY([1.3,1.57])-self.xy_matrix[1])<0.05, "Difference too big: %g" % math.fabs(self.comp.runXY([1.3,1.57])-self.xy_matrix[1]))
[64f0c5d]	1138
[7ef319e]	1139
	1140	def testCriticalPoint(self):
	1141	""" Test HayterMSAStructure at the critical point"""
	1142	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1143
	1144
	1145	class TestBEPolyelectrolyte(unittest.TestCase):
	1146	""" Unit tests for BEPolyelectrolyte"""
	1147
	1148	def setUp(self):
	1149	from sans.models.BEPolyelectrolyte import BEPolyelectrolyte
	1150	self.comp = BEPolyelectrolyte()
	1151
	1152	self.comp.setParam('k',10)
	1153	self.comp.setParam('lb',7.1)
	1154	self.comp.setParam('h',12)
	1155	self.comp.setParam('b',10)
	1156	self.comp.setParam('cs', 0.0)
	1157	self.comp.setParam('alpha',0.05)
	1158	self.comp.setParam('c', 0.7)
	1159	self.comp.setParam('background',0.001)
	1160
	1161	self.x = numpy.array([0.4, 1.3])
	1162	self.y = numpy.array([0.5, 1.57])
	1163
	1164	self.x_array = self.comp.evalDistribution(self.x)
	1165	self.y_array = self.comp.evalDistribution(self.y)
	1166	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1167	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1168	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
	1169
[9ce41c6]	1170	def test1D(self):
	1171	""" Test 1D model for a BEPolyelectrolyte"""
	1172	self.assertAlmostEqual(self.comp.run(0.001),0.0948, 3)
	1173
	1174	def test1D_2(self):
	1175	""" Test 2D model for a BEPolyelectrolyte"""
	1176	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.0948, 3)
	1177
	1178	def testEval_1D(self):
	1179	""" Test 1D model for a BEPolyelectrolyte with evalDistribution"""
	1180	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1181	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1182
	1183	def testEval_2D(self):
	1184	""" Test 2D model for a BEPolyelectrolyte with evalDistribution"""
[64f0c5d]	1185	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1186	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1187
[7ef319e]	1188
	1189	def testCriticalPoint(self):
	1190	""" Test BEPolyelectrolyte at the critical point"""
	1191	self.assert_(numpy.isfinite(self.comp.run(0.0)))
	1192
[9ce41c6]	1193
	1194	class TestDABModel(unittest.TestCase):
	1195	""" Unit tests for DABModel"""
	1196
	1197	def setUp(self):
	1198	from sans.models.DABModel import DABModel
	1199	self.comp = DABModel()
	1200	self.comp.setParam('length',40.0)
	1201	self.comp.setParam('scale',10.0)
	1202	self.comp.setParam('background',1.0)
	1203
	1204	self.x = numpy.array([0.4, 1.3])
	1205	self.y = numpy.array([0.5, 1.57])
	1206
	1207	self.x_array = self.comp.evalDistribution(self.x)
	1208	self.y_array = self.comp.evalDistribution(self.y)
	1209	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1210	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1211	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1212
	1213	def test1D(self):
	1214	""" Test 1D model for a DABModel"""
[64f0c5d]	1215	self.assertAlmostEqual(self.comp.run(0.001),637957.9047, 3)
[9ce41c6]	1216
	1217	def test1D_2(self):
	1218	""" Test 2D model for a DABModel"""
[64f0c5d]	1219	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),637957.90473, 3)
[9ce41c6]	1220
	1221	def testEval_1D(self):
	1222	""" Test 1D model for a DABModel with evalDistribution"""
	1223	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1224	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1225
	1226	def testEval_2D(self):
	1227	""" Test 2D model for a DABModel with evalDistribution"""
[64f0c5d]	1228	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1229	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1230
[7ef319e]	1231
	1232	def testCriticalPoint(self):
	1233	""" Test DABModel at the critical point"""
	1234	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[f1e0c1eb]	1235
[9ce41c6]	1236
	1237
	1238	class TestGuinierModel(unittest.TestCase):
	1239	""" Unit tests for Guinier Model"""
	1240
	1241	def setUp(self):
	1242	from sans.models.GuinierModel import GuinierModel
	1243	self.comp = GuinierModel()
	1244	self.comp.setParam('scale',1.0)
[a65ffcb]	1245	self.comp.setParam('rg', 1)
[9ce41c6]	1246
	1247	self.x = numpy.array([0.4, 1.3])
	1248	self.y = numpy.array([0.5, 1.57])
	1249
	1250	self.x_array = self.comp.evalDistribution(self.x)
	1251	self.y_array = self.comp.evalDistribution(self.y)
	1252	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1253	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1254	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1255
	1256	def test1D(self):
	1257	""" Test 1D model for a GuinierModel"""
[a65ffcb]	1258	self.assertAlmostEqual(self.comp.run(1.0),0.716531, 4)
[9ce41c6]	1259
	1260	def test1D_2(self):
	1261	""" Test 2D model for a GuinierModel"""
[a65ffcb]	1262	self.assertAlmostEqual(self.comp.run([1.0, 1.3]),0.716531, 4)
	1263
[9ce41c6]	1264	def testEval_1D(self):
	1265	""" Test 1D model for a GuinierModel with evalDistribution"""
	1266	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1267	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1268
	1269	def testEval_2D(self):
	1270	""" Test 2D model for a GuinierModel with evalDistribution"""
[64f0c5d]	1271	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1272	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1273
[9ce41c6]	1274
[7ef319e]	1275	def testCriticalPoint(self):
	1276	""" Test GuinierModel at the critical point"""
	1277	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1278
	1279
	1280	class TestDebyeModel(unittest.TestCase):
	1281	""" Unit tests for Debye Model"""
	1282
	1283	def setUp(self):
	1284	from sans.models.DebyeModel import DebyeModel
	1285	self.comp = DebyeModel()
	1286	self.comp.setParam('rg', 50.0)
	1287	self.comp.setParam('scale',1.0)
	1288	self.comp.setParam('background',0.001)
	1289
	1290	self.x = numpy.array([0.4, 1.3])
	1291	self.y = numpy.array([0.5, 1.57])
	1292
	1293	self.x_array = self.comp.evalDistribution(self.x)
	1294	self.y_array = self.comp.evalDistribution(self.y)
	1295	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1296	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1297	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1298
	1299	def test1D(self):
	1300	""" Test 1D model for a DebyeModel"""
	1301	self.assertAlmostEqual(self.comp.run(0.001),1.00017,4)
	1302
	1303	def test1D_2(self):
	1304	""" Test 2D model for a DebyeModel"""
	1305	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),1.00017,4)
	1306
	1307	def testEval_1D(self):
	1308	""" Test 1D model for a DebyeModel with evalDistribution"""
	1309	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1310	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1311
	1312	def testEval_2D(self):
	1313	""" Test 2D model for a DebyeModel with evalDistribution"""
[64f0c5d]	1314	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1315	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1316
[9ce41c6]	1317
[7ef319e]	1318	def testCriticalPoint(self):
	1319	""" Test DebyeModel at the critical point"""
	1320	self.assertEquals(self.comp.run(0.0),1.001)
	1321
[9ce41c6]	1322
	1323	class TestPorodModel(unittest.TestCase):
	1324	""" Unit tests for PorodModel"""
	1325
	1326	def setUp(self):
	1327	from sans.models.PorodModel import PorodModel
	1328	self.comp = PorodModel()
	1329	self.comp.setParam('scale', 1.0)
	1330	self.comp.setParam('background', 0.0)
	1331
	1332	self.x = numpy.array([0.4, 1.3])
	1333	self.y = numpy.array([0.5, 1.57])
	1334
	1335	self.x_array = self.comp.evalDistribution(self.x)
	1336	self.y_array = self.comp.evalDistribution(self.y)
	1337	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1338	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1339	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1340
	1341	def test1D(self):
	1342	""" Test 1D model for a PorodModel"""
	1343	self.assertEquals(self.comp.run(0.5), 16)
	1344
	1345	def test1D_2(self):
	1346	""" Test 2D model for a PorodModel"""
	1347	self.assertEquals(self.comp.run([0.5, 1.3]),16)
	1348
	1349	def testEval_1D(self):
	1350	""" Test 1D model for a PorodModel with evalDistribution"""
	1351	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1352	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1353
	1354	def testEval_2D(self):
	1355	""" Test 2D model for a PorodModel with evalDistribution"""
[64f0c5d]	1356	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1357	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1358
[9ce41c6]	1359
[7ef319e]	1360	def testCreaticalPoint(self):
[9ce41c6]	1361	""" Test for critical point for PorodModel run"""
	1362	self.assertRaises(ZeroDivisionError, self.comp.run, 0.0)
	1363
	1364
	1365	class TestPeakGaussModel(unittest.TestCase):
	1366	""" Unit tests for PeakGaussModel"""
	1367
	1368	def setUp(self):
	1369	from sans.models.PeakGaussModel import PeakGaussModel
	1370	self.comp = PeakGaussModel()
	1371	self.comp.setParam('scale', 100)
	1372	self.comp.setParam('B', 0.005)
	1373	self.comp.setParam('q0',0.05)
	1374	self.comp.setParam('background',1.0)
	1375
	1376	self.x = numpy.array([0.4, 1.3])
	1377	self.y = numpy.array([0.5, 1.57])
	1378
	1379	self.x_array = self.comp.evalDistribution(self.x)
	1380	self.y_array = self.comp.evalDistribution(self.y)
	1381	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1382	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1383	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1384
	1385	def test1D(self):
	1386	""" Test 1D model for a PeakGauss Model"""
	1387	self.assertEquals(self.comp.run(0.001),1)
	1388
	1389	def test1D_2(self):
	1390	""" Test 2D model for a PeakGauss Model"""
	1391	self.assertEquals(self.comp.run([0.001, 1.3]),1)
	1392
	1393	def testEval_1D(self):
	1394	""" Test 1D model for a PeakGauss Model with evalDistribution"""
	1395	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1396	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1397
	1398	def testEval_2D(self):
	1399	""" Test 2D model for a PeakGauss Model with evalDistribution"""
[64f0c5d]	1400	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1401	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
[7ef319e]	1402
	1403	def testCriticalPoint(self):
	1404	""" Test PeakGauss at the critical point"""
	1405	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1406
	1407	class TestPeakLorentzModel(unittest.TestCase):
	1408	""" Unit tests for PeakLorentzModel"""
	1409
	1410	def setUp(self):
	1411	from sans.models.PeakLorentzModel import PeakLorentzModel
	1412	self.comp = PeakLorentzModel()
	1413	self.comp.setParam('scale', 100)
	1414	self.comp.setParam('B', 0.005)
	1415	self.comp.setParam('q0',0.05)
	1416	self.comp.setParam('background',1.0)
	1417
	1418	self.x = numpy.array([0.4, 1.3])
	1419	self.y = numpy.array([0.5, 1.57])
	1420
	1421	self.x_array = self.comp.evalDistribution(self.x)
	1422	self.y_array = self.comp.evalDistribution(self.y)
	1423	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1424	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1425	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1426
	1427	def test1D(self):
	1428	""" Test 1D model for a PeakLorentz Model"""
	1429	self.assertAlmostEqual(self.comp.run(0.001), 2.0305, 3)
	1430
	1431	def test1D_2(self):
	1432	""" Test 2D model for a PeakLorentz Model"""
	1433	self.assertAlmostEqual(self.comp.run([0.001, 1.3]), 2.0305, 3)
	1434
	1435	def testEval_1D(self):
	1436	""" Test 1D model for a PeakLorentz Model with evalDistribution"""
	1437	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1438	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1439
	1440	def testEval_2D(self):
	1441	""" Test 2D model for a PeakLorentz Model with evalDistribution"""
[64f0c5d]	1442	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1443	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1444
[9ce41c6]	1445
[7ef319e]	1446	def testCriticalPoint(self):
	1447	""" Test PeakLorentz at the critical point"""
	1448	self.comp.setParam('B', 0.0)
	1449	self.assertRaises(ZeroDivisionError, self.comp.run, 10)
[279e371]	1450	#self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1451
	1452	class TestFractalModel(unittest.TestCase):
	1453	""" Unit tests for FractalModel"""
	1454
	1455	def setUp(self):
	1456	from sans.models.FractalModel import FractalModel
	1457	self.comp = FractalModel()
	1458	self.comp.setParam('scale', 0.05)
	1459	self.comp.setParam('radius', 5.0)
	1460	self.comp.setParam('fractal_dim', 2.0)
[64f0c5d]	1461	self.comp.setParam('cor_length',100.0)
	1462	self.comp.setParam('sldBlock', 2.0e-6)
	1463	self.comp.setParam('sldSolv', 6.35e-6)
[9ce41c6]	1464	self.comp.setParam('background',0.0)
	1465
	1466	self.x = numpy.array([0.4, 1.3])
	1467	self.y = numpy.array([0.5, 1.57])
	1468
	1469	self.x_array = self.comp.evalDistribution(self.x)
	1470	self.y_array = self.comp.evalDistribution(self.y)
	1471	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1472	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1473	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1474
	1475	def test1D(self):
	1476	""" Test 1D model for a Fractal Model"""
	1477	self.assertAlmostEqual(self.comp.run(0.001), 39.2881, 3)
	1478
	1479	def test1D_2(self):
	1480	""" Test 2D model for a Fractal Model"""
	1481	self.assertAlmostEqual(self.comp.run([0.001, 1.3]), 39.2881, 3)
	1482
	1483	def testEval_1D(self):
	1484	""" Test 1D model for a Fractal Model with evalDistribution"""
	1485	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1486	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1487
	1488	def testEval_2D(self):
	1489	""" Test 2D model for a Fractal Model with evalDistribution"""
[64f0c5d]	1490	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1491	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1492
	1493	# No more singular point
	1494	#def testCriticalPoint(self):
	1495	# """ Test Fractal at the critical point"""
	1496	# self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1497
	1498	class TestLorentzModel(unittest.TestCase):
	1499	""" Unit tests for LorentzModel"""
	1500
	1501	def setUp(self):
	1502	from sans.models.LorentzModel import LorentzModel
	1503	self.comp = LorentzModel()
	1504	self.comp.setParam("background",1)
	1505	self.comp.setParam("length",50)
	1506	self.comp.setParam("scale",100)
	1507
	1508	self.x = numpy.array([0.4, 1.3])
	1509	self.y = numpy.array([0.5, 1.57])
	1510
	1511	self.x_array = self.comp.evalDistribution(self.x)
	1512	self.y_array = self.comp.evalDistribution(self.y)
	1513	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1514	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1515	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1516
	1517	def test1D(self):
	1518	""" Test 1D model for a Lorentz Model"""
	1519	self.assertAlmostEqual(self.comp.run(0.001),100.751, 2)
	1520
	1521	def test1D_2(self):
	1522	""" Test 2D model for a Lorentz Model"""
	1523	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),100.751, 2)
	1524
	1525	def testEval_1D(self):
	1526	""" Test 1D model for a Lorentz Model with evalDistribution"""
	1527	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1528	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1529
	1530	def testEval_2D(self):
	1531	""" Test 2D model for a Lorentz Model with evalDistribution"""
[64f0c5d]	1532	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1533	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1534
[7ef319e]	1535
	1536	def testCriticalPoint(self):
	1537	""" Test Lorentz at the critical point"""
	1538	self.assert_(numpy.isfinite(self.comp.run(0.0)))
	1539
	1540
[9ce41c6]	1541	class TestPowerLawAbsModel(unittest.TestCase):
	1542	""" Unit tests for PowerLawAbsModel"""
	1543
	1544	def setUp(self):
	1545	from sans.models.PowerLawAbsModel import PowerLawAbsModel
	1546	self.comp = PowerLawAbsModel()
	1547	self.comp.setParam("background",1)
	1548	self.comp.setParam("m",4)
	1549	self.comp.setParam("scale",1e-6)
	1550
	1551	self.x = numpy.array([0.4, 1.3])
	1552	self.y = numpy.array([0.5, 1.57])
	1553	self.x_array = self.comp.evalDistribution(self.x)
	1554	self.y_array = self.comp.evalDistribution(self.y)
	1555	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1556	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1557	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1558
	1559	def test1D(self):
	1560	""" Test 1D model for a PowerLawAbs Model"""
	1561	self.assertAlmostEqual(self.comp.run(0.19189), 1.00074,4)
	1562
	1563	def test1D_2(self):
	1564	""" Test 2D model for a PowerLawAbs Model"""
	1565	self.assertAlmostEqual(self.comp.run([0.19189,1.3]), 1.00074,4)
	1566
	1567	def testEval_1D(self):
	1568	""" Test 1D model for a PowerLawAbs Model with evalDistribution"""
	1569	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1570	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1571
	1572	def testEval_2D(self):
	1573	""" Test 2D model for a PowerLawAbs Model with evalDistribution"""
[64f0c5d]	1574	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1575	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1576
[9ce41c6]	1577
[7ef319e]	1578	def testCriticalPoint(self):
	1579	""" Test PowerLawAbs at the critical point"""
	1580	self.assert_(numpy.isfinite(self.comp.run(0.0)))
	1581
	1582
[9ce41c6]	1583	class TestPowerLawModel(unittest.TestCase):
	1584	""" Unit tests for PowerLawModel"""
	1585
	1586	def setUp(self):
	1587	from sans.models.PowerLawModel import PowerLawModel
	1588	self.comp = PowerLawModel()
	1589	self.comp.setParam("background",1)
	1590	self.comp.setParam("m",4)
	1591	self.comp.setParam("scale",1e-6)
	1592
	1593	self.x = numpy.array([0.4, 1.3])
	1594	self.y = numpy.array([0.5, 1.57])
	1595	self.x_array = self.comp.evalDistribution(self.x)
	1596	self.y_array = self.comp.evalDistribution(self.y)
	1597	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1598	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1599	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1600
	1601	def test1D(self):
	1602	""" Test 1D model for a PowerLaw Model"""
	1603	self.assertAlmostEquals(self.comp.run(0.19189), 1.00074,4)
	1604
	1605	def test1D_2(self):
	1606	""" Test 2D model for a PowerLawModel"""
	1607	self.assertAlmostEquals(self.comp.run([0.19189,1.3]), 1.00074,4)
	1608
	1609	def testEval_1D(self):
	1610	""" Test 1D model for a PowerLawModel with evalDistribution"""
	1611	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1612	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1613
	1614	def testEval_2D(self):
	1615	""" Test 2D model for a PowerLawModel with evalDistribution"""
[64f0c5d]	1616	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1617	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1618
[7ef319e]	1619
	1620	def testCriticalPoint(self):
	1621	""" Test PowerLawModel at the critical point"""
	1622	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9ce41c6]	1623
	1624
	1625	class TestTeubnerStreyModel(unittest.TestCase):
	1626	""" Unit tests for TeubnerStreyModel"""
	1627
	1628	def setUp(self):
	1629	from sans.models.TeubnerStreyModel import TeubnerStreyModel
	1630	self.comp = TeubnerStreyModel()
	1631	self.comp.setParam("background",0.1)
	1632	self.comp.setParam("c1",-30)
	1633	self.comp.setParam("c2",5000)
	1634	self.comp.setParam("scale",0.1)
	1635
	1636	self.x = numpy.array([0.4, 1.3])
	1637	self.y = numpy.array([0.5, 1.57])
	1638	self.x_array = self.comp.evalDistribution(self.x)
	1639	self.y_array = self.comp.evalDistribution(self.y)
	1640	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1641	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1642	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1643
	1644	def test1D(self):
	1645	""" Test 1D model for a TeubnerStrey Model"""
	1646	self.assertAlmostEqual(self.comp.run(0.001),10.103, 1)
	1647
	1648	def test1D_2(self):
	1649	""" Test 2D model for a TeubnerStrey Model"""
	1650	self.assertAlmostEqual(self.comp.run([0.001, 1.3]),10.103, 1)
	1651
	1652	def testEval_1D(self):
	1653	""" Test 1D model for a TeubnerStrey with evalDistribution"""
	1654	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1655	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1656
	1657	def testEval_2D(self):
	1658	""" Test 2D model for a TeubnerStrey with evalDistribution"""
[64f0c5d]	1659	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0],8)
	1660	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1661
[7ef319e]	1662
	1663	def testCriticalPoint(self):
	1664	""" Test TeubnerStrey at the critical point"""
	1665	self.assert_(numpy.isfinite(self.comp.run(0.0)))
	1666
[9ce41c6]	1667
	1668	class TestLineModel(unittest.TestCase):
	1669	""" Unit tests for LineModel"""
	1670
	1671	def setUp(self):
	1672	from sans.models.LineModel import LineModel
	1673	self.comp = LineModel()
	1674	self.comp.setParam("A",1)
	1675	self.comp.setParam("B",1)
	1676
	1677	self.x = numpy.array([0.4, 1.3])
	1678	self.y = numpy.array([0.5, 1.57])
	1679	self.x_array = self.comp.evalDistribution(self.x)
	1680	self.y_array = self.comp.evalDistribution(self.y)
	1681	qx_prime = numpy.reshape(self.x, [1,len(self.x)])
	1682	qy_prime = numpy.reshape(self.y, [len(self.y),1])
[64f0c5d]	1683	self.xy_matrix = self.comp.evalDistribution([self.x, self.y])
[9ce41c6]	1684
	1685	def test1D(self):
	1686	""" Test 1D model for a Line Model"""
	1687	self.assertEquals(self.comp.run(1.0),2)
	1688
	1689	def testEval_1D(self):
	1690	""" Test 1D model for a Line with evalDistribution"""
	1691	self.assertEquals(self.comp.run(0.4),self.x_array[0])
	1692	self.assertEquals(self.comp.run(1.3),self.x_array[1])
	1693
	1694	def testEval_2D(self):
	1695	""" Test 2D model for a Line with evalDistribution"""
[64f0c5d]	1696	self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0], 8)
	1697	self.assertAlmostEquals(self.comp.runXY([1.3,1.57]),self.xy_matrix[1], 8)
	1698
[7ef319e]	1699
	1700	def testCriticalPoint(self):
	1701	""" Test line at the critical point"""
	1702	self.assert_(numpy.isfinite(self.comp.run(0.0)))
[9fafa39]	1703
	1704	class TestMassFractalModel(unittest.TestCase):
	1705	""" Unit tests for MassFractalModel: Need to verify the test value"""
	1706
	1707	def setUp(self):
	1708	from sans.models.MassFractalModel import MassFractalModel
	1709	self.comp = MassFractalModel()
	1710
	1711	def testEval_1D(self):
	1712	""" Test 1D model for a MassFractalModel"""
	1713	self.assertAlmostEquals(self.comp.run(0.05), 279.59322, 4)
	1714
	1715	class TestSurfaceFractalModel(unittest.TestCase):
	1716	""" Unit tests for SurfaceFractalModel: Need to verify the test value"""
	1717
	1718	def setUp(self):
	1719	from sans.models.SurfaceFractalModel import SurfaceFractalModel
	1720	self.comp = SurfaceFractalModel()
	1721
	1722	def testEval_1D(self):
	1723	""" Test 1D model for a SurfaceFractal"""
	1724	self.assertAlmostEquals(self.comp.run(0.05), 301428.65916, 4)
	1725
	1726	class TestMassSurfaceFractal(unittest.TestCase):
	1727	""" Unit tests for MassSurfaceFractal: Need to verify the test value"""
	1728
	1729	def setUp(self):
	1730	from sans.models.MassSurfaceFractal import MassSurfaceFractal
	1731	self.comp = MassSurfaceFractal()
	1732
	1733	def testEval_1D(self):
	1734	""" Test 1D model for a MassSurfaceFractal"""
	1735	self.assertAlmostEquals(self.comp.run(0.05), 1.77537e-05, 4)
	1736
[9ce41c6]	1737	if __name__ == '__main__':
[f1e0c1eb]	1738	unittest.main()

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SasView

source: sasview/sansmodels/test/utest_other_models.py @ 1b28ff5

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