source: sasview/sansmodels/test/utest_model_onionexpshell.py @ d59cb8c

"""
    Unit tests for specific models
    @author: JHJ Cho / UTK
"""

import unittest

class TestOnionExpShell1(unittest.TestCase):
    """ 
        Unit tests for OnionExpShellModel
    """
    def setUp(self):

        from sans.models.OnionExpShellModel import OnionExpShellModel
        from sans.models.CoreMultiShellModel import CoreMultiShellModel
        from sans.models.VesicleModel import VesicleModel 
        
        # intit models and the multifactor
        self.model = OnionExpShellModel(1)
        self.model2 = OnionExpShellModel(1).model
        self.model3 = CoreMultiShellModel(1)
        self.model4 = VesicleModel()
        self.model5 = OnionExpShellModel(9)
        
    def test_compare_Exp0_flat(self):
        """
        Check if Exp function with A_shell=0 gives the same value as Flat function
        """
        print "\n*****Note: All tests (test_compare_Exp0_flat and test_compare_Expsmall_line) were passes since Sept. 18, 2010..."
        # Exp: func_shell = 2, Line: func_shell =1 , Flat: func_shell = 0.
        # A_shell = The coefficient of the exponential function: exp(A_shell*(r-ro)/thick_shell)
        # exp function by default
        # exp function crosses over to flat func at A_shell=0
        self.model.setParam("A_shell1", 0)
        # set A_shell=1
        self.model2.setParam("A_shell1", 1)
        # change the function to flat function
        self.model2.setParam("func_shell1", 0)
        #self.model2.setParam("sld_in_shell1", 1.7e-006)
        #self.model2.setParam("sld_out_shell1", 1.7e-006)
        
        # model3: set param values as same as the model2
        self.model3.setParam("background", 0.0)
        self.model3.setParam("rad_core0", 200.0)
        self.model3.setParam("scale", 1.0)
        self.model3.setParam("sld_core0", 1.0e-006)
        self.model3.setParam("sld_shell1", 1.7e-006)
        self.model3.setParam("sld_solv", 6.4e-006)
        self.model3.setParam("thick_shell1", 50.0)
        
        #Compare exp(A=0) to flat (where A_shell is null) function
        self.assertEqual(self.model.run(0.1),self.model2.run(0.1))
        self.assertAlmostEqual(self.model2.run(0.1),self.model3.run(0.1),10)
        

  
    def test_compare_Expsmall_line(self):
        """
        Check if Exp function with A_shell-->0 gives the same value 
        as a linear function
        """
        # exp function crosses over to line func as A_shell-->0
        self.model.setParam("A_shell1", 0.000001)
        self.model2.setParam("A_shell1", 1)
        # change the function to a line function
        self.model2.setParam("func_shell1", 1)
        
        #Compare exp(A=0.000001) to linear (where A_shell is null) function   
        self.assertAlmostEqual(self.model.run(0.1),self.model2.run(0.1),4)
        
    def test_compare_time_linear_flat_functions(self):
        """
        Compare the calculation time between func=1(linear) , and 2 (step).
        """
        from time import time
        # using linear func
        self.model5.model.setParam("func_shell1", 1)
        #input
        input = [0.01,0.01]
        st = time()
        for iter in range(0,100000):
            self.model5.model.run(0.01)
        time_linear = time()-st
        
        # using flat function
        self.model5.model.setParam("func_shell1", 0)
        st = time()
        for iter in range(0,100000):
            self.model5.model.run(0.01)
        time_flat = time()-st
        
        print "time (linear) = %s, \n time (flat) = %s"% (time_linear,time_flat)
        
        #Compare time of the calculation: time_linear takes a bit longer
        # but they are not much different  
        self.assertAlmostEqual(time_linear,time_flat,0)
  
    # this feature removed!!!
    """
    def test_compare_Exp0_flat_vesicle(self):
    """
    """
        Check if Exp function with A_shell=0 gives the same value as Flat 
        function of vesicle model when sld_solv=sld_core
        """
    """
        print "\n*****Note: All tests (test_compare_Exp0_flat and \
            test_compare_Expsmall_line) were passes since Sept. 18, 2010..."
        # Exp: func_shell = 2, Line: func_shell =1 , Flat: func_shell = 0.
        # A_shell = The coefficient of the exponential function: exp(A_shell*(r-ro)/thick_shell)
        # exp function by default
        # exp function crosses over to flat func at A_shell=0
        self.model.setParam("A_shell1", 0)
                # set A_shell=1
        self.model2.setParam("A_shell1", 1)
        # change the function to flat function
        self.model2.setParam("func_shell1", 0)
        
        # model: set param values as same as the model2
        self.model.setParam("background", 0.0)
        self.model.setParam("rad_core0", 100.0)
        self.model.setParam("scale", 1.0)
        self.model.setParam("sld_core0", 6.36e-006)
        self.model.setParam("sld_in_shell1", 5e-007)
        self.model.setParam("sld_solv", 6.36e-006)
        self.model.setParam("thick_shell1", 30.0)
        # model2: set param values as same as the model2
        self.model2.setParam("background", 0.0)
        self.model2.setParam("rad_core0", 100.0)
        self.model2.setParam("scale", 1.0)
        self.model2.setParam("sld_core0", 6.36e-006)
        self.model2.setParam("sld_in_shell1", 5e-007)
        self.model2.setParam("sld_solv", 6.36e-006)
        self.model2.setParam("thick_shell1", 30.0)
        #Compare exp(A=0) to flat (where A_shell is null) function
        self.assertEqual(self.model.run(0.1),self.model4.run(0.1))
        self.assertEqual(self.model2.run(0.1),self.model4.run(0.1))
        #self.assertAlmostEqual(self.model2.run(0.1),self.model3.run(0.1),10)
    """               
if __name__ == '__main__':
    unittest.main()