source: sasview/sansmodels/src/setup.py @ 35aface

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Last change on this file since 35aface was 35aface, checked in by Jae Cho <jhjcho@…>, 14 years ago

addede new models and attr. non_fittable
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Line 
1"""
2 Installation script for SANS models
3
4  - To compile and install:
5      python setup.py install
6  - To create distribution:
7      python setup.py bdist_wininst
8  - To create odb files:
9      python setup.py odb
10
11"""
12import sys
13import os
14if len(sys.argv) == 1:
15    sys.argv.append('install')
16from numpy.distutils.misc_util import get_numpy_include_dirs
17numpy_incl_path = os.path.join(get_numpy_include_dirs()[0], "numpy")
18
19def createODBcontent(class_name):
20    """
21        Return the content of the Pyre odb file for a given class
22        @param class_name: Name of the class to write an odb file for [string]
23        @return: content of the file [string]
24    """
25    content  = "\"\"\"\n"
26    content += "  Facility for SANS model\n\n"
27    content += "  WARNING: THIS FILE WAS AUTOGENERATED AT INSTALL TIME\n"
28    content += "           DO NOT MODIFY\n\n"
29    content += "  This code was written as part of the DANSE project\n"
30    content += "  http://danse.us/trac/sans/\n"
31    content += "  @copyright 2007:"
32    content += "  SANS/DANSE Group (University of Tennessee), for the DANSE project\n\n"
33    content += "\"\"\"\n"
34    content += "def model():\n"
35    content += "    from ScatteringIntensityFactory import ScatteringIntensityFactory\n"
36    content += "    from sans.models.%s import %s\n" % (class_name, class_name)
37    content += "    return ScatteringIntensityFactory(%s)('%s')\n"\
38                 % (class_name, class_name)
39
40    return content
41
42def createODBfiles():
43    """
44       Create odb files for all available models
45    """
46    from sans.models.ModelFactory import ModelFactory
47   
48    class_list = ModelFactory().getAllModels()
49    for name in class_list:
50        odb = open("sans/models/pyre/%s.odb" % name, 'w')
51        odb.write(createODBcontent(name))
52        odb.close()
53        print "sans/models/pyre/%s.odb created" % name
54       
55#
56# Proceed with installation
57#
58
59# First, create the odb files
60if len(sys.argv) > 1 and sys.argv[1].lower() == 'odb':
61    print "Creating odb files"
62    try:
63        createODBfiles()
64    except:   
65        print "ERROR: could not create odb files"
66        print sys.exc_value
67    sys.exit()
68
69# Then build and install the modules
70from distutils.core import setup, Extension
71
72
73# Build the module name
74srcdir  = "sans/models/c_extensions"
75igordir = "libigor"
76
77print "Installing SANS models"
78
79
80setup(
81    name="models",
82    version = "0.4",
83    description = "Python module for SANS scattering models",
84    author = "Mathieu Doucet",
85    author_email = "doucet@nist.gov",
86    url = "http://danse.us/trac/sans",
87   
88    # Place this module under the sans package
89    #ext_package = "sans",
90   
91    # Use the pure python modules
92    package_dir = {"sans_extension":"sans/models/c_extensions"},
93   
94    packages = ["sans","sans.models","sans.models.test",
95                "sans_extension","sans.models.pyre"],
96   
97    ext_modules = [ Extension("sans_extension.c_models",
98     sources = [
99        "sans/models/c_models/c_models.cpp",
100        #srcdir+"/CSphereModel.c",
101        #srcdir+"/sphere.c",
102        "sans/models/c_models/CSphereModel.cpp",
103        "sans/models/c_models/COnionModel.cpp",
104        "sans/models/c_models/onion.cpp",
105        srcdir+"/onion.c",
106        "sans/models/c_models/CReflModel.cpp",
107        "sans/models/c_models/refl.cpp",
108        srcdir+"/refl.c",
109        srcdir+"/SquareWell.c",
110        "sans/models/c_models/CSquareWellStructure.cpp", 
111        "sans/models/c_models/SquareWell.cpp", 
112        srcdir+"/StickyHS.c",         
113        "sans/models/c_models/CStickyHSStructure.cpp", 
114        "sans/models/c_models/StickyHS.cpp",     
115        srcdir+"/Hardsphere.c",         
116        "sans/models/c_models/CHardsphereStructure.cpp", 
117        "sans/models/c_models/Hardsphere.cpp",   
118        srcdir+"/DiamCyl.c",         
119        "sans/models/c_models/CDiamCylFunc.cpp", 
120        "sans/models/c_models/DiamCyl.cpp",   
121        srcdir+"/DiamEllip.c",         
122        "sans/models/c_models/CDiamEllipFunc.cpp", 
123        "sans/models/c_models/DiamEllip.cpp",     
124        srcdir+"/HayterMSA.c",         
125        "sans/models/c_models/CHayterMSAStructure.cpp", 
126        "sans/models/c_models/HayterMSA.cpp",             
127        "sans/models/c_models/sphere.cpp",
128        srcdir+"/fuzzysphere.c",
129        "sans/models/c_models/CFuzzySphereModel.cpp",
130        "sans/models/c_models/fuzzysphere.cpp",
131        #srcdir+"/CCylinderModel.c",
132        "sans/models/c_models/CCylinderModel.cpp",
133        "sans/models/c_models/cylinder.cpp",
134        "sans/models/c_models/parameters.cpp",
135        "sans/models/c_models/dispersion_visitor.cpp",
136        srcdir+"/cylinder.c",
137        #srcdir+"/CParallelepiped.c",
138        "sans/models/c_models/CParallelepipedModel.cpp",
139        "sans/models/c_models/parallelepiped.cpp",
140        srcdir+"/parallelepiped.c",
141        #srcdir+"/CCoreShellCylinderModel.c",
142        "sans/models/c_models/CCoreShellCylinderModel.cpp",
143        "sans/models/c_models/coreshellcylinder.cpp",
144        srcdir+"/core_shell_cylinder.c",
145        #srcdir+"/CHollowCylinderModel.c",
146        "sans/models/c_models/CHollowCylinderModel.cpp",
147        "sans/models/c_models/hollowcylinder.cpp",
148        srcdir+"/hollow_cylinder.c",
149        #srcdir+"/CCoreShellModel.c",
150        #srcdir+"/core_shell.c",
151        "sans/models/c_models/CCoreShellModel.cpp",
152        "sans/models/c_models/coreshellsphere.cpp",
153        #srcdir+"/CEllipsoidModel.c",
154        "sans/models/c_models/CEllipsoidModel.cpp",
155        "sans/models/c_models/ellipsoid.cpp",       
156        srcdir+"/ellipsoid.c",
157        "sans/models/c_models/CCoreFourShellModel.cpp",
158        "sans/models/c_models/corefourshell.cpp",
159        srcdir+"/corefourshell.c",
160        #srcdir+"/CEllipticalCylinderModel.c",
161        "sans/models/c_models/CEllipticalCylinderModel.cpp",
162        "sans/models/c_models/ellipticalcylinder.cpp",               
163        srcdir+"/elliptical_cylinder.c",
164        #srcdir+"/CTriaxialEllipsoidModel.c",
165        "sans/models/c_models/CTriaxialEllipsoidModel.cpp",
166        "sans/models/c_models/triaxialellipsoid.cpp",               
167        srcdir+"/triaxial_ellipsoid.c",
168        #srcdir+"/CFlexibleCylinderModel.c",
169        "sans/models/c_models/CFlexibleCylinderModel.cpp",
170        "sans/models/c_models/flexiblecylinder.cpp",               
171        srcdir+"/flexible_cylinder.c",
172        "sans/models/c_models/CFlexCylEllipXModel.cpp",
173        "sans/models/c_models/flexcyl_ellipX.cpp",         
174        srcdir+"/flexcyl_ellipX.c",
175        #srcdir+"/CStakedDisksModel.c",
176        "sans/models/c_models/CStackedDisksModel.cpp",
177        "sans/models/c_models/stackeddisks.cpp",               
178        srcdir+"/stacked_disks.c",
179        #srcdir+"/CLamellarModel.c",
180        "sans/models/c_models/CLamellarModel.cpp",
181        "sans/models/c_models/lamellar.cpp",               
182        srcdir+"/lamellar.c",
183        #srcdir+"/CLamellarFFHGModel.c",
184        "sans/models/c_models/CLamellarFFHGModel.cpp",
185        "sans/models/c_models/lamellarFF_HG.cpp",               
186        srcdir+"/lamellarFF_HG.c",
187        #srcdir+"/CLamellarPSModel.c",
188        "sans/models/c_models/CLamellarPSModel.cpp",
189        "sans/models/c_models/lamellarPS.cpp",               
190        srcdir+"/lamellarPS.c",
191        #srcdir+"/CLamellarPSHGModel.c",
192        "sans/models/c_models/CLamellarPSHGModel.cpp",
193        "sans/models/c_models/lamellarPS_HG.cpp",               
194        srcdir+"/lamellarPS_HG.c",
195        #srcdir+"/COblateModel.c",
196        "sans/models/c_models/CCoreShellEllipsoidModel.cpp",
197        "sans/models/c_models/spheroid.cpp",   
198        srcdir+"/spheroid.c",             
199        #srcdir+"/COblateModel.c",
200        #"sans/models/c_models/COblateModel.cpp",
201        #"sans/models/c_models/oblate.cpp",               
202        #srcdir+"/oblate.c",
203        #srcdir+"/CProlateModel.c",
204        #"sans/models/c_models/CProlateModel.cpp",
205        #"sans/models/c_models/prolate.cpp",               
206        #srcdir+"/prolate.c",
207        #srcdir+"/CMultishellModel.c",
208        "sans/models/c_models/CMultiShellModel.cpp",
209        "sans/models/c_models/multishell.cpp",               
210        srcdir+"/multishell.c",
211        #srcdir+"/CVesicleModel.c",
212        "sans/models/c_models/CVesicleModel.cpp",
213        "sans/models/c_models/vesicle.cpp",               
214        srcdir+"/vesicle.c",
215        #srcdir+"/CBinaryHSModel.c",
216        "sans/models/c_models/CBinaryHSModel.cpp",
217        "sans/models/c_models/binaryHS.cpp",               
218        "sans/models/c_models/CPoly_GaussCoil.cpp",
219        "sans/models/c_models/polygausscoil.cpp",   
220        srcdir+"/rpa.c",             
221        "sans/models/c_models/CRPAModel.cpp",
222        "sans/models/c_models/rpa.cpp", 
223        srcdir+"/fractal.c",             
224        "sans/models/c_models/CFractalModel.cpp",
225        "sans/models/c_models/fractal.cpp", 
226       
227        #gammainc function need to imported from somewhere 
228        #srcdir+"/polyexclvol.c",             
229        #"sans/models/c_models/CPolymerExclVolModel.cpp",
230        #"sans/models/c_models/polyexclvol.cpp", 
231         
232        srcdir+"/polygausscoil.c",             
233        srcdir+"/binaryHS.c",
234        srcdir+"/disperser.c",
235        igordir+"/libCylinder.c",
236        igordir+"/libStructureFactor.c",
237        igordir+"/libSphere.c",
238        igordir+"/libTwoPhase.c",
239        srcdir+"/gaussian.c",
240        srcdir+"/CGaussian.c",
241        srcdir+"/logNormal.c",
242        srcdir+"/CLogNormal.c",
243        srcdir+"/schulz.c",
244        srcdir+"/CSchulz.c",
245        srcdir+"/lorentzian.c",
246        srcdir+"/CLorentzian.c"
247            ],
248         include_dirs=[igordir,srcdir,"sans/models/c_models",numpy_incl_path])])
249       
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