1 | """ |
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2 | Unit tests for specific models. |
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3 | @since: 08/25/2009 |
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4 | @note: The models are running also with numpy array as input. |
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5 | Some models return limit of the function at critical point . |
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6 | So the user should expect finite value for some critical points. |
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7 | Initial values for models are given as the one of Igo software. |
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8 | @author: Gervaise Alina / UTK |
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9 | """ |
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10 | |
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11 | import unittest |
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12 | import numpy |
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13 | import math |
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14 | |
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15 | class TestCoreShell(unittest.TestCase): |
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16 | """ Unit tests for coreshell model """ |
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17 | |
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18 | def setUp(self): |
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19 | from sans.models.CoreShellModel import CoreShellModel |
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20 | self.comp = CoreShellModel() |
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21 | #Give initial value to model |
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22 | self.comp.setParam("scale", 1.0) |
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23 | self.comp.setParam("radius", 60.0) |
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24 | self.comp.setParam("thickness", 10.0) |
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25 | self.comp.setParam("core_sld", 1.0e-6) |
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26 | self.comp.setParam("shell_sld",2.0e-6) |
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27 | self.comp.setParam("solvent_sld",3.0e-6) |
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28 | self.comp.setParam("Background", 0.001) |
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29 | |
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30 | self.x = numpy.array([0.4, 1.3]) |
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31 | self.y = numpy.array([0.5, 1.57]) |
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32 | self.x_array = self.comp.evalDistribution(self.x) |
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33 | self.y_array = self.comp.evalDistribution(self.y) |
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34 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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35 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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36 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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37 | |
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38 | def test1D(self): |
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39 | """ Test 1D model for a coreshell """ |
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40 | self.assertAlmostEquals(self.comp.run(0.4),0.00169, 4) |
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41 | |
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42 | def test1D_2(self): |
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43 | """ Test 2D model for a coreshell """ |
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44 | self.assertAlmostEquals(self.comp.run([0.4, 1.3]),0.00169, 4) |
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45 | |
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46 | def testEval_1D(self): |
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47 | """ Test 1D model for a coreshell with evalDistribution""" |
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48 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
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49 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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50 | |
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51 | def testEval_2D(self): |
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52 | """ Test 2D model for a coreshell with evalDistribution""" |
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53 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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54 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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55 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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56 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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57 | |
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58 | |
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59 | |
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60 | class TestMultiShellModel(unittest.TestCase): |
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61 | """ Unit tests for MultiShell Model """ |
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62 | |
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63 | def setUp(self): |
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64 | from sans.models.MultiShellModel import MultiShellModel |
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65 | self.comp = MultiShellModel() |
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66 | #Give initial value to model |
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67 | self.comp.setParam("scale", 1.0) |
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68 | self.comp.setParam("core_radius", 60.0) |
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69 | self.comp.setParam("s_thickness", 10.0) |
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70 | self.comp.setParam("w_thickness",10.0 ) |
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71 | self.comp.setParam("core_sld",6.4e-6) |
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72 | self.comp.setParam("shell_sld",4e-7) |
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73 | self.comp.setParam("n_pairs", 2) |
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74 | self.comp.setParam("Background", 0.001) |
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75 | |
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76 | self.x = numpy.array([0.4, 1.3]) |
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77 | self.y = numpy.array([0.5, 1.57]) |
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78 | self.x_array = self.comp.evalDistribution(self.x) |
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79 | self.y_array = self.comp.evalDistribution(self.y) |
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80 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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81 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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82 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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83 | |
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84 | def test1D(self): |
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85 | """ Test 1D model for a MultiShell Model """ |
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86 | self.assertAlmostEquals(self.comp.run(0.001), 2442.81, 2) |
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87 | |
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88 | def test1D_2(self): |
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89 | """ Test 2D model for a MultiShell Model""" |
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90 | self.assertAlmostEquals(self.comp.run([0.001, 0.30903]), 2442.81, 2) |
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91 | |
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92 | def testEval_1D(self): |
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93 | """ Test 1D model for a MultiShell with evalDistribution""" |
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94 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
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95 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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96 | |
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97 | def testEval_2D(self): |
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98 | """ Test 2D model for a MultiShell with evalDistribution""" |
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99 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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100 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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101 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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102 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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103 | |
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104 | |
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105 | class TestVesicleModel(unittest.TestCase): |
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106 | """ Unit tests for Vesicle Model """ |
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107 | |
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108 | def setUp(self): |
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109 | from sans.models.VesicleModel import VesicleModel |
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110 | self.comp = VesicleModel() |
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111 | #Give initial value to model |
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112 | self.comp.setParam("scale", 1.0) |
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113 | self.comp.setParam("radius", 100.0) |
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114 | self.comp.setParam("core_sld", 6.36e-6) |
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115 | self.comp.setParam("shell_sld",5e-7) |
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116 | self.comp.setParam("thickness",30.0 ) |
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117 | self.comp.setParam("Background", 0.001) |
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118 | |
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119 | self.x = numpy.array([0.4, 1.3]) |
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120 | self.y = numpy.array([0.5, 1.57]) |
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121 | self.x_array = self.comp.evalDistribution(self.x) |
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122 | self.y_array = self.comp.evalDistribution(self.y) |
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123 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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124 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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125 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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126 | |
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127 | def test1D(self): |
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128 | """ Test 1D model for a Vesicle Model """ |
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129 | self.assertAlmostEquals(self.comp.run(0.001), 1.71399e4,1) |
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130 | |
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131 | def test1D_2(self): |
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132 | """ Test 2D model for a Vesicle Model""" |
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133 | self.assertAlmostEquals(self.comp.run([0.001, 1.3]), 1.71399e4,1) |
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134 | |
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135 | def testEval_1D(self): |
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136 | """ Test 1D model for a Vesicle with evalDistribution""" |
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137 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
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138 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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139 | |
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140 | def testEval_2D(self): |
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141 | """ Test 2D model for a Vesicle with evalDistribution""" |
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142 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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143 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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144 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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145 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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146 | |
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147 | |
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148 | class TestBinaryHSModel(unittest.TestCase): |
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149 | """ Unit tests for BinaryHS Model""" |
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150 | |
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151 | def setUp(self): |
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152 | from sans.models.BinaryHSModel import BinaryHSModel |
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153 | self.comp = BinaryHSModel() |
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154 | #Give initial value to model |
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155 | self.comp.setParam("l_radius", 100.0) |
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156 | self.comp.setParam("ls_sld", 3.5e-6) |
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157 | self.comp.setParam("s_radius",25) |
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158 | self.comp.setParam("solvent_sld",6.36e-6 ) |
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159 | self.comp.setParam("ss_sld", 5e-7) |
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160 | self.comp.setParam("vol_frac_ss", 0.1) |
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161 | self.comp.setParam("vol_frac_ls", 0.2) |
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162 | self.comp.setParam("Background", 0.001) |
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163 | |
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164 | self.x = numpy.array([0.4, 1.3]) |
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165 | self.y = numpy.array([0.5, 1.57]) |
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166 | self.x_array = self.comp.evalDistribution(self.x) |
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167 | self.y_array = self.comp.evalDistribution(self.y) |
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168 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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169 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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170 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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171 | |
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172 | def test1D(self): |
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173 | """ Test 1D model for a BinaryHS Model""" |
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174 | self.assertAlmostEquals(self.comp.run(0.001),60.6785, 4) |
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175 | |
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176 | def test1D_2(self): |
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177 | """ Test 2D model for a BinaryHS Model""" |
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178 | self.assertAlmostEquals(self.comp.run([0.001, 1.3]),60.6785, 4) |
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179 | |
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180 | def testEval_1D(self): |
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181 | """ Test 1D model for a BinaryHS with evalDistribution""" |
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182 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
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183 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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184 | |
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185 | def testEval_2D(self): |
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186 | """ Test 2D model for a BinaryHS with evalDistribution""" |
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187 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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188 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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189 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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190 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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191 | |
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192 | |
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193 | class TestCoreShellCylinderModel(unittest.TestCase): |
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194 | """ Unit tests for CoreShellCylinder Model""" |
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195 | |
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196 | def setUp(self): |
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197 | from sans.models.CoreShellCylinderModel import CoreShellCylinderModel |
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198 | self.comp = CoreShellCylinderModel() |
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199 | #Give initial value to model |
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200 | self.comp.setParam("scale", 1.0) |
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201 | self.comp.setParam("core_sld", 1e-6) |
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202 | self.comp.setParam("length", 400) |
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203 | self.comp.setParam("radius",20) |
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204 | self.comp.setParam("solvent_sld",1e-6 ) |
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205 | self.comp.setParam("shell_sld", 4e-6) |
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206 | self.comp.setParam("thickness", 10.0) |
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207 | self.comp.setParam("Background", 0.01) |
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208 | |
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209 | self.x = numpy.array([0.4, 1.3]) |
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210 | self.y = numpy.array([0.5, 1.57]) |
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211 | self.x_array = self.comp.evalDistribution(self.x) |
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212 | self.y_array = self.comp.evalDistribution(self.y) |
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213 | |
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214 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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215 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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216 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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217 | |
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218 | self.q = 0.001 |
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219 | self.phi= math.pi/2 |
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220 | self.qx= self.q*math.cos(self.phi) |
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221 | self.qy= self.q*math.sin(self.phi) |
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222 | |
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223 | def test1D(self): |
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224 | """ Test 1D model for a CoreShellCylinder Model""" |
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225 | self.assertAlmostEqual(self.comp.run(0.001), 353.56,1) |
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226 | |
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227 | def test1D_2(self): |
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228 | """ Test 2D model for a CoreShellCylinder Model""" |
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229 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
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230 | self.comp.runXY([self.qx, self.qy]),1) |
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231 | |
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232 | def testEval_1D(self): |
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233 | """ Test 1D model for a CoreShellCylinder with evalDistribution""" |
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234 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
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235 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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236 | |
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237 | def testEval_2D(self): |
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238 | """ Test 2D model for a CoreShellCylinder with evalDistribution""" |
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239 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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240 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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241 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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242 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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243 | |
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244 | |
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245 | class TestHollowCylinderModel(unittest.TestCase): |
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246 | """ Unit tests for HollowCylinder Model""" |
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247 | |
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248 | def setUp(self): |
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249 | from sans.models.HollowCylinderModel import HollowCylinderModel |
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250 | self.comp = HollowCylinderModel() |
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251 | #Give initial value to model |
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252 | self.comp.setParam("scale", 1.0) |
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253 | self.comp.setParam("core_radius",20.0) |
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254 | self.comp.setParam("radius",30) |
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255 | self.comp.setParam("length", 400) |
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256 | self.comp.setParam("contrast",5.3e-6 ) |
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257 | self.comp.setParam("Background", 0.01) |
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258 | |
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259 | self.x = numpy.array([0.4, 1.3]) |
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260 | self.y = numpy.array([0.5, 1.57]) |
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261 | self.x_array = self.comp.evalDistribution(self.x) |
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262 | self.y_array = self.comp.evalDistribution(self.y) |
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263 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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264 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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265 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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266 | |
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267 | self.q = 0.001 |
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268 | self.phi= math.pi/2 |
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269 | self.qx= self.q*math.cos(self.phi) |
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270 | self.qy= self.q*math.sin(self.phi) |
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271 | |
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272 | def test1D(self): |
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273 | """ Test 1D model for a HollowCylinder Model""" |
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274 | self.assertAlmostEqual(self.comp.run(0.001), 1756.76, 1) |
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275 | |
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276 | def test1D_2(self): |
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277 | """ Test 2D model for a HollowCylinder Model""" |
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278 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
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279 | self.comp.runXY([self.qx, self.qy]),1) |
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280 | |
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281 | def testEval_1D(self): |
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282 | """ Test 1D model for a HollowCylinder with evalDistribution""" |
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283 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
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284 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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285 | |
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286 | def testEval_2D(self): |
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287 | """ Test 2D model for a HollowCylinder with evalDistribution""" |
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288 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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289 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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290 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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291 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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292 | |
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293 | |
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294 | class TestFlexibleCylinderModel(unittest.TestCase): |
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295 | """ Unit tests for FlexibleCylinder Model""" |
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296 | |
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297 | def setUp(self): |
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298 | from sans.models.FlexibleCylinderModel import FlexibleCylinderModel |
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299 | self.comp = FlexibleCylinderModel() |
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300 | #Give initial value to model |
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301 | self.comp.setParam("scale", 1.0) |
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302 | self.comp.setParam("contrast",5.3e-6 ) |
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303 | self.comp.setParam("kuhn_length",100) |
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304 | self.comp.setParam("length", 1000) |
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305 | self.comp.setParam("radius",20) |
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306 | self.comp.setParam("Background", 0.0001) |
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307 | |
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308 | self.x = numpy.array([0.4, 1.3]) |
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309 | self.y = numpy.array([0.5, 1.57]) |
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310 | self.x_array = self.comp.evalDistribution(self.x) |
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311 | self.y_array = self.comp.evalDistribution(self.y) |
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312 | |
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313 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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314 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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315 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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316 | |
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317 | self.q = 0.001 |
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318 | self.phi= math.pi/2 |
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319 | self.qx= self.q*math.cos(self.phi) |
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320 | self.qy= self.q*math.sin(self.phi) |
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321 | |
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322 | def test1D(self): |
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323 | """ Test 1D model for a FlexibleCylinder Model""" |
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324 | self.assertAlmostEqual(self.comp.run(0.001), 3509.22, 1) |
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325 | |
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326 | def test1D_2(self): |
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327 | """ Test 2D model for a FlexibleCylinder Model""" |
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328 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
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329 | self.comp.runXY([self.qx, self.qy]),1) |
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330 | def testEval_1D(self): |
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331 | """ Test 1D model for a FlexibleCylinder Model with evalDistribution""" |
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332 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
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333 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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334 | |
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335 | def testEval_2D(self): |
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336 | """ Test 2D model for a FlexibleCylinder Model with evalDistribution""" |
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337 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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338 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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339 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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340 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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341 | |
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342 | |
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343 | |
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344 | class TestStackedDisksModel(unittest.TestCase): |
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345 | """ Unit tests for StackedDisks Model""" |
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346 | |
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347 | def setUp(self): |
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348 | from sans.models.StackedDisksModel import StackedDisksModel |
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349 | self.comp = StackedDisksModel() |
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350 | #Give initial value to model |
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351 | self.comp.setParam("scale", 0.01 ) |
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352 | self.comp.setParam("radius",3000.0 ) |
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353 | self.comp.setParam("core_thick", 10.0) |
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354 | self.comp.setParam("layer_thick",15.0 ) |
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355 | self.comp.setParam("core_sld",4e-006 ) |
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356 | self.comp.setParam("layer_sld",-4e-007 ) |
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357 | self.comp.setParam("solvent_sld", 5e-006 ) |
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358 | self.comp.setParam("n_stacking",1.0 ) |
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359 | self.comp.setParam("sigma_d", 0.0) |
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360 | self.comp.setParam("background",0.001) |
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361 | self.comp.setParam("axis_theta", 0.0 ) |
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362 | self.comp.setParam("axis_phi",0.0) |
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363 | |
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364 | self.x = numpy.array([0.4, 1.3]) |
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365 | self.y = numpy.array([0.5, 1.57]) |
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366 | self.x_array = self.comp.evalDistribution(self.x) |
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367 | self.y_array = self.comp.evalDistribution(self.y) |
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368 | |
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369 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
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370 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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371 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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372 | |
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373 | self.q = 0.001 |
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374 | self.phi= math.pi/2 |
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375 | self.qx= self.q*math.cos(self.phi) |
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376 | self.qy= self.q*math.sin(self.phi) |
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377 | |
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378 | def test1D(self): |
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379 | """ Test 1D model for a StackedDisks Model""" |
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380 | self.assertAlmostEqual(self.comp.run(0.001), 5075.12, 1) |
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381 | |
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382 | def test1D_2(self): |
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383 | """ Test 2D model for a StackedDisks Model""" |
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384 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
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385 | self.comp.runXY([self.qx, self.qy]),1) |
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386 | |
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387 | def testEval_1D(self): |
---|
388 | """ Test 1D model for a StackedDisks Model with evalDistribution""" |
---|
389 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
390 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
391 | |
---|
392 | def testEval_2D(self): |
---|
393 | """ Test 2D model for a StackedDisks Model with evalDistribution""" |
---|
394 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
395 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
396 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
397 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
398 | |
---|
399 | |
---|
400 | class TestParallelepipedModel(unittest.TestCase): |
---|
401 | """ Unit tests for Parallelepiped Model""" |
---|
402 | |
---|
403 | def setUp(self): |
---|
404 | from sans.models.ParallelepipedModel import ParallelepipedModel |
---|
405 | self.comp = ParallelepipedModel() |
---|
406 | #Give initial value to model |
---|
407 | self.comp.setParam("background", 0.0 ) |
---|
408 | self.comp.setParam("short_a",35) |
---|
409 | self.comp.setParam("short_b", 75) |
---|
410 | self.comp.setParam("long_c",400 ) |
---|
411 | self.comp.setParam("contrast", 5.3e-006 ) |
---|
412 | self.comp.setParam("scale",1.0 ) |
---|
413 | |
---|
414 | self.x = numpy.array([0.4, 1.3]) |
---|
415 | self.y = numpy.array([0.5, 1.57]) |
---|
416 | self.x_array = self.comp.evalDistribution(self.x) |
---|
417 | self.y_array = self.comp.evalDistribution(self.y) |
---|
418 | |
---|
419 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
420 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
421 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
422 | |
---|
423 | self.q = 0.001 |
---|
424 | self.phi= math.pi/2 |
---|
425 | self.qx= self.q*math.cos(self.phi) |
---|
426 | self.qy= self.q*math.sin(self.phi) |
---|
427 | |
---|
428 | |
---|
429 | def test1D(self): |
---|
430 | """ Test 1D model for a Parallelepiped Model""" |
---|
431 | self.assertAlmostEqual(self.comp.run(0.001), 2935.82, 2) |
---|
432 | |
---|
433 | def test1D_2(self): |
---|
434 | """ Test 2D model for a Parallelepiped Model""" |
---|
435 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
---|
436 | self.comp.runXY([self.qx, self.qy]),1) |
---|
437 | |
---|
438 | def testEval_1D(self): |
---|
439 | """ Test 1D model for a Parallelepiped Model with evalDistribution""" |
---|
440 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
441 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
442 | |
---|
443 | def testEval_2D(self): |
---|
444 | """ Test 2D model for a Parallelepiped Model with evalDistribution""" |
---|
445 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
446 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
447 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
448 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
449 | |
---|
450 | |
---|
451 | class TestEllipticalCylinderModel(unittest.TestCase): |
---|
452 | """ Unit tests for EllipticalCylinder Model""" |
---|
453 | |
---|
454 | def setUp(self): |
---|
455 | from sans.models.EllipticalCylinderModel import EllipticalCylinderModel |
---|
456 | self.comp = EllipticalCylinderModel() |
---|
457 | self.comp.setParam("scale",1.0) |
---|
458 | self.comp.setParam("r_minor",20.0) |
---|
459 | self.comp.setParam("r_ratio",1.5) |
---|
460 | self.comp.setParam("length",400.0) |
---|
461 | self.comp.setParam("contrast",5.3e-006) |
---|
462 | self.comp.setParam("background",0.0) |
---|
463 | self.comp.setParam("cyl_theta",0.0) |
---|
464 | self.comp.setParam("cyl_phi",0.0) |
---|
465 | self.comp.setParam("cyl_psi",0.0) |
---|
466 | |
---|
467 | self.x = numpy.array([0.4, 1.3]) |
---|
468 | self.y = numpy.array([0.5, 1.57]) |
---|
469 | self.x_array = self.comp.evalDistribution(self.x) |
---|
470 | self.y_array = self.comp.evalDistribution(self.y) |
---|
471 | |
---|
472 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
473 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
474 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
475 | |
---|
476 | self.q = 0.001 |
---|
477 | self.phi= math.pi/2 |
---|
478 | self.qx= self.q*math.cos(self.phi) |
---|
479 | self.qy= self.q*math.sin(self.phi) |
---|
480 | |
---|
481 | def test1D(self): |
---|
482 | """ Test 1D model for a EllipticalCylinder Model""" |
---|
483 | self.assertAlmostEqual(self.comp.run(0.001),2108.32, 1) |
---|
484 | |
---|
485 | def test1D_2(self): |
---|
486 | """ Test 2D model for a EllipticalCylinder Model""" |
---|
487 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
---|
488 | self.comp.runXY([self.qx, self.qy]),1) |
---|
489 | |
---|
490 | def testEval_1D(self): |
---|
491 | """ Test 1D model for a EllipticalCylinder with evalDistribution""" |
---|
492 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
493 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
494 | |
---|
495 | def testEval_2D(self): |
---|
496 | """ Test 2D model for a EllipticalCylinder with evalDistribution""" |
---|
497 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
498 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
499 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
500 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
501 | |
---|
502 | |
---|
503 | |
---|
504 | class TestEllipsoidModel(unittest.TestCase): |
---|
505 | """ Unit tests for Ellipsoid Model""" |
---|
506 | |
---|
507 | def setUp(self): |
---|
508 | from sans.models.EllipsoidModel import EllipsoidModel |
---|
509 | self.comp = EllipsoidModel() |
---|
510 | self.comp.setParam("scale",1.0) |
---|
511 | self.comp.setParam("radius_a",20.0) |
---|
512 | self.comp.setParam("radius_b",400.0) |
---|
513 | self.comp.setParam("contrast",3e-006) |
---|
514 | self.comp.setParam("background",0.0) |
---|
515 | self.comp.setParam("axis_theta",1.57) |
---|
516 | self.comp.setParam("axis_phi",0.0) |
---|
517 | |
---|
518 | self.x = numpy.array([0.4, 1.3]) |
---|
519 | self.y = numpy.array([0.5, 1.57]) |
---|
520 | self.x_array = self.comp.evalDistribution(self.x) |
---|
521 | self.y_array = self.comp.evalDistribution(self.y) |
---|
522 | |
---|
523 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
524 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
525 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
526 | |
---|
527 | self.q = 0.001 |
---|
528 | self.phi= math.pi/2 |
---|
529 | self.qx= self.q*math.cos(self.phi) |
---|
530 | self.qy= self.q*math.sin(self.phi) |
---|
531 | |
---|
532 | def test1D(self): |
---|
533 | """ Test 1D model for a Ellipsoid Model""" |
---|
534 | self.assertAlmostEqual(self.comp.run(1.0), 0.000733968, 4) |
---|
535 | |
---|
536 | def test1D_2(self): |
---|
537 | """ Test 2D model for a Ellipsoid Model""" |
---|
538 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
---|
539 | self.comp.runXY([self.qx, self.qy]),1) |
---|
540 | def testEval_1D(self): |
---|
541 | """ Test 1D model for a Ellipsoid Model with evalDistribution""" |
---|
542 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
543 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
544 | |
---|
545 | def testEval_2D(self): |
---|
546 | """ Test 2D model for a Ellipsoid Model with evalDistribution""" |
---|
547 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
548 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
549 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
550 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
551 | |
---|
552 | |
---|
553 | class TestCoreShellEllipsoidModel(unittest.TestCase): |
---|
554 | """ Unit tests for CoreShellEllipsoid Model""" |
---|
555 | |
---|
556 | def setUp(self): |
---|
557 | from sans.models.CoreShellEllipsoidModel import CoreShellEllipsoidModel |
---|
558 | self.comp = CoreShellEllipsoidModel() |
---|
559 | #Give initial value to model |
---|
560 | self.comp.setParam("scale", 1.0) |
---|
561 | self.comp.setParam("equat_core", 200.0) |
---|
562 | self.comp.setParam("polar_core", 20.0) |
---|
563 | self.comp.setParam("equat_shell",250.0) |
---|
564 | self.comp.setParam("polar_shell", 30.0) |
---|
565 | self.comp.setParam("contrast",1e-006) |
---|
566 | self.comp.setParam("sld_solvent",6.3e-006) |
---|
567 | self.comp.setParam("background",0.001) |
---|
568 | self.comp.setParam("axis_theta", 0.0) |
---|
569 | self.comp.setParam("axis_phi",0.0) |
---|
570 | |
---|
571 | self.x = numpy.array([0.4, 1.3]) |
---|
572 | self.y = numpy.array([0.5, 1.57]) |
---|
573 | self.x_array = self.comp.evalDistribution(self.x) |
---|
574 | self.y_array = self.comp.evalDistribution(self.y) |
---|
575 | |
---|
576 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
577 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
578 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
579 | |
---|
580 | self.q = 0.001 |
---|
581 | self.phi= math.pi/2 |
---|
582 | self.qx= self.q*math.cos(self.phi) |
---|
583 | self.qy= self.q*math.sin(self.phi) |
---|
584 | |
---|
585 | def test1D(self): |
---|
586 | """ Test 1D model for a CoreShellEllipsoid Model""" |
---|
587 | self.assertAlmostEqual(self.comp.run(1.0), 0.002578943, 4) |
---|
588 | |
---|
589 | def test1D_2(self): |
---|
590 | """ Test 2D model for a CoreShellEllipsoid Model""" |
---|
591 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
---|
592 | self.comp.runXY([self.qx, self.qy]),1) |
---|
593 | |
---|
594 | def testEval_1D(self): |
---|
595 | """ Test 1D model for a CoreShellEllipsoid with evalDistribution""" |
---|
596 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
597 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
598 | |
---|
599 | def testEval_2D(self): |
---|
600 | """ Test 2D model for a CoreShellEllipsoid with evalDistribution""" |
---|
601 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
602 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
603 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
604 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
605 | |
---|
606 | |
---|
607 | class TestTriaxialEllipsoidModel(unittest.TestCase): |
---|
608 | """ Unit tests for TriaxialEllipsoid Model""" |
---|
609 | |
---|
610 | def setUp(self): |
---|
611 | from sans.models.TriaxialEllipsoidModel import TriaxialEllipsoidModel |
---|
612 | self.comp = TriaxialEllipsoidModel() |
---|
613 | self.comp.setParam("scale",1.0) |
---|
614 | self.comp.setParam("semi_axisA",35.0) |
---|
615 | self.comp.setParam("semi_axisB", 100.0) |
---|
616 | self.comp.setParam("semi_axisC",400.0 ) |
---|
617 | self.comp.setParam("contrast",5.3e-6) |
---|
618 | self.comp.setParam("background",0.0) |
---|
619 | self.comp.setParam("axis_theta", 1.0) |
---|
620 | self.comp.setParam("axis_phi",0.0 ) |
---|
621 | self.comp.setParam("axis_psi",0.0 ) |
---|
622 | |
---|
623 | self.x = numpy.array([0.4, 1.3]) |
---|
624 | self.y = numpy.array([0.5, 1.57]) |
---|
625 | |
---|
626 | self.x_array = self.comp.evalDistribution(self.x) |
---|
627 | self.y_array = self.comp.evalDistribution(self.y) |
---|
628 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
629 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
630 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
631 | |
---|
632 | self.q = 0.001 |
---|
633 | self.phi= math.pi/2 |
---|
634 | self.qx= self.q*math.cos(self.phi) |
---|
635 | self.qy= self.q*math.sin(self.phi) |
---|
636 | |
---|
637 | |
---|
638 | def test1D(self): |
---|
639 | """ Test 1D model for a TriaxialEllipsoid Model""" |
---|
640 | self.assertAlmostEquals(self.comp.run(0.001),16285.6, 1) |
---|
641 | |
---|
642 | def test1D_2(self): |
---|
643 | """ Test 2D model for a TriaxialEllipsoid Model""" |
---|
644 | self.assertAlmostEqual(self.comp.run([self.q, self.phi]), |
---|
645 | self.comp.runXY([self.qx, self.qy]),1) |
---|
646 | |
---|
647 | def testEval_1D(self): |
---|
648 | """ Test 1D model for a TriaxialEllipsoid Model with evalDistribution""" |
---|
649 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
650 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
651 | |
---|
652 | def testEval_2D(self): |
---|
653 | """ Test 2D model for a TriaxialEllipsoid Model with evalDistribution""" |
---|
654 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
655 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
656 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
657 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
658 | |
---|
659 | |
---|
660 | class TestLamellarModel(unittest.TestCase): |
---|
661 | """ Unit tests for Lamellar Model""" |
---|
662 | |
---|
663 | def setUp(self): |
---|
664 | from sans.models.LamellarModel import LamellarModel |
---|
665 | self.comp = LamellarModel() |
---|
666 | self.comp.setParam("scale",1.0) |
---|
667 | self.comp.setParam("bi_thick",50.0) |
---|
668 | self.comp.setParam("sld_bi",1e-006) |
---|
669 | self.comp.setParam("sld_sol",6.3e-006) |
---|
670 | self.comp.setParam("background",0.0) |
---|
671 | |
---|
672 | self.x = numpy.array([0.4, 1.3]) |
---|
673 | self.y = numpy.array([0.5, 1.57]) |
---|
674 | |
---|
675 | self.x_array = self.comp.evalDistribution(self.x) |
---|
676 | self.y_array = self.comp.evalDistribution(self.y) |
---|
677 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
678 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
679 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
680 | |
---|
681 | def test1D(self): |
---|
682 | """ Test 1D model for a Lamellar Model""" |
---|
683 | self.assertAlmostEquals(self.comp.run(0.001), 902120) |
---|
684 | |
---|
685 | def test1D_2(self): |
---|
686 | """ Test 2D model for a Lamellar Model""" |
---|
687 | self.assertAlmostEquals(self.comp.run([0.001, 1.3]),902120) |
---|
688 | |
---|
689 | def testEval_1D(self): |
---|
690 | """ Test 1D model for a Lamellar Model with evalDistribution""" |
---|
691 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
692 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
693 | |
---|
694 | def testEval_2D(self): |
---|
695 | """ Test 2D model for a Lamellar Model with evalDistribution""" |
---|
696 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
697 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
698 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
699 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
700 | |
---|
701 | |
---|
702 | class TestLamellarFFHGModel(unittest.TestCase): |
---|
703 | """ Unit tests for LamellarFFHG Model""" |
---|
704 | |
---|
705 | def setUp(self): |
---|
706 | from sans.models.LamellarFFHGModel import LamellarFFHGModel |
---|
707 | self.comp = LamellarFFHGModel() |
---|
708 | self.comp.setParam("scale",1.0) |
---|
709 | self.comp.setParam("t_length",15.0) |
---|
710 | self.comp.setParam("h_thickness",10.0) |
---|
711 | self.comp.setParam("sld_tail",4e-007) |
---|
712 | self.comp.setParam("sld_head",3e-006) |
---|
713 | self.comp.setParam("sld_solvent",6e-006) |
---|
714 | self.comp.setParam("background",0.0) |
---|
715 | |
---|
716 | self.x = numpy.array([0.4, 1.3]) |
---|
717 | self.y = numpy.array([0.5, 1.57]) |
---|
718 | |
---|
719 | self.x_array = self.comp.evalDistribution(self.x) |
---|
720 | self.y_array = self.comp.evalDistribution(self.y) |
---|
721 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
722 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
723 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
724 | |
---|
725 | |
---|
726 | def test1D(self): |
---|
727 | """ Test 1D model for a LamellarFFHG Model""" |
---|
728 | self.assertAlmostEquals(self.comp.run(0.001),653144) |
---|
729 | |
---|
730 | def test1D_2(self): |
---|
731 | """ Test 2D model for a LamellarFFHG Model""" |
---|
732 | self.assertAlmostEquals(self.comp.run([0.001, 1.3]),653144) |
---|
733 | |
---|
734 | def testEval_1D(self): |
---|
735 | """ Test 1D model for a LamellarFFHG Model with evalDistribution""" |
---|
736 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
737 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
738 | |
---|
739 | def testEval_2D(self): |
---|
740 | """ Test 2D model for a LamellarFFHG Model with evalDistribution""" |
---|
741 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
742 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
743 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
744 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
745 | |
---|
746 | |
---|
747 | class TestLamellarPSModel(unittest.TestCase): |
---|
748 | """ Unit tests for LamellarPS Model""" |
---|
749 | |
---|
750 | def setUp(self): |
---|
751 | from sans.models.LamellarPSModel import LamellarPSModel |
---|
752 | self.comp = LamellarPSModel() |
---|
753 | self.comp.setParam("scale",1.0) |
---|
754 | self.comp.setParam("spacing",400.0) |
---|
755 | self.comp.setParam("delta",30.0) |
---|
756 | self.comp.setParam("contrast",5.3e-006) |
---|
757 | self.comp.setParam("n_plates",20.0) |
---|
758 | self.comp.setParam("caille", 0.1) |
---|
759 | self.comp.setParam("background",0.0) |
---|
760 | |
---|
761 | self.x = numpy.array([0.4, 1.3]) |
---|
762 | self.y = numpy.array([0.5, 1.57]) |
---|
763 | |
---|
764 | self.x_array = self.comp.evalDistribution(self.x) |
---|
765 | self.y_array = self.comp.evalDistribution(self.y) |
---|
766 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
767 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
768 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
769 | |
---|
770 | |
---|
771 | def test1D(self): |
---|
772 | """ Test 1D model for a LamellarPS Model""" |
---|
773 | self.assertAlmostEquals(self.comp.run(0.001), 28526.8, 1) |
---|
774 | |
---|
775 | def test1D_2(self): |
---|
776 | """ Test 2D model for a LamellarPS Model""" |
---|
777 | self.assertAlmostEquals(self.comp.run([0.001, 1.3]),28526.8, 1) |
---|
778 | |
---|
779 | def testEval_1D(self): |
---|
780 | """ Test 1D model for a LamellarPS Model with evalDistribution""" |
---|
781 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
782 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
783 | |
---|
784 | def testEval_2D(self): |
---|
785 | """ Test 2D model for a LamellarPS Model with evalDistribution""" |
---|
786 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
787 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
788 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
789 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
790 | |
---|
791 | |
---|
792 | |
---|
793 | class TestLamellarPSHGModel(unittest.TestCase): |
---|
794 | """ Unit tests for LamellarPSHG Model""" |
---|
795 | |
---|
796 | def setUp(self): |
---|
797 | from sans.models.LamellarPSHGModel import LamellarPSHGModel |
---|
798 | self.comp = LamellarPSHGModel() |
---|
799 | self.comp.setParam("scale",1.0) |
---|
800 | self.comp.setParam("spacing",40.0) |
---|
801 | self.comp.setParam("deltaT",10.0) |
---|
802 | self.comp.setParam("deltaH",2.0) |
---|
803 | self.comp.setParam("sld_tail",4e-7) |
---|
804 | self.comp.setParam("sld_head",2e-6) |
---|
805 | self.comp.setParam("sld_solvent",6e-6) |
---|
806 | self.comp.setParam("n_plates",30) |
---|
807 | self.comp.setParam("caille",0.001) |
---|
808 | self.comp.setParam("background",0.001) |
---|
809 | |
---|
810 | self.x = numpy.array([0.4, 1.3]) |
---|
811 | self.y = numpy.array([0.5, 1.57]) |
---|
812 | |
---|
813 | self.x_array = self.comp.evalDistribution(self.x) |
---|
814 | self.y_array = self.comp.evalDistribution(self.y) |
---|
815 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
816 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
817 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
818 | |
---|
819 | def test1D(self): |
---|
820 | """ Test 1D model for a LamellarPSHG Model""" |
---|
821 | self.assertAlmostEquals(self.comp.run(0.001),6.83139e6, 3) |
---|
822 | |
---|
823 | def test1D_2(self): |
---|
824 | """ Test 2D model for a LamellarPSHG Model""" |
---|
825 | self.assertAlmostEquals(self.comp.run([0.001, 1.3]),6.83139e6,3) |
---|
826 | |
---|
827 | def testEval_1D(self): |
---|
828 | """ Test 1D model for a LamellarPSHG Model with evalDistribution""" |
---|
829 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
830 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
831 | |
---|
832 | def testEval_2D(self): |
---|
833 | """ Test 2D model for a LamellarPSHG Model with evalDistribution""" |
---|
834 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
835 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
836 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
837 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
838 | |
---|
839 | |
---|
840 | class TestSquareWellStructure(unittest.TestCase): |
---|
841 | """ Unit tests for SquareWellStructure """ |
---|
842 | |
---|
843 | def setUp(self): |
---|
844 | from sans.models.SquareWellStructure import SquareWellStructure |
---|
845 | self.comp = SquareWellStructure() |
---|
846 | self.comp.setParam("effect_radius",50.0) |
---|
847 | self.comp.setParam("volfraction",0.04) |
---|
848 | self.comp.setParam("welldepth",1.5 ) |
---|
849 | self.comp.setParam("wellwidth",1.2) |
---|
850 | |
---|
851 | self.x = numpy.array([0.4, 1.3]) |
---|
852 | self.y = numpy.array([0.5, 1.57]) |
---|
853 | |
---|
854 | self.x_array = self.comp.evalDistribution(self.x) |
---|
855 | self.y_array = self.comp.evalDistribution(self.y) |
---|
856 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
857 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
858 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
859 | |
---|
860 | |
---|
861 | def test1D(self): |
---|
862 | """ Test 1D model for a SquareWellStructure""" |
---|
863 | self.assertAlmostEqual(self.comp.run(0.001), 0.976657, 2) |
---|
864 | |
---|
865 | def test1D_2(self): |
---|
866 | """ Test 2D model for a SquareWellStructure""" |
---|
867 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.9776657,2) |
---|
868 | |
---|
869 | def testEval_1D(self): |
---|
870 | """ Test 1D model for a SquareWellStructure with evalDistribution""" |
---|
871 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
872 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
873 | |
---|
874 | def testEval_2D(self): |
---|
875 | """ Test 2D model for a SquareWellStructure with evalDistribution""" |
---|
876 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
877 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
878 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
879 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
880 | |
---|
881 | |
---|
882 | class TestHardsphereStructure(unittest.TestCase): |
---|
883 | """ Unit tests for HardsphereStructure""" |
---|
884 | |
---|
885 | def setUp(self): |
---|
886 | from sans.models.HardsphereStructure import HardsphereStructure |
---|
887 | self.comp = HardsphereStructure() |
---|
888 | self.comp.setParam("effect_radius",50.0) |
---|
889 | self.comp.setParam("volfraction", 0.2) |
---|
890 | self.x = numpy.array([0.4, 1.3]) |
---|
891 | self.y = numpy.array([0.5, 1.57]) |
---|
892 | |
---|
893 | self.x_array = self.comp.evalDistribution(self.x) |
---|
894 | self.y_array = self.comp.evalDistribution(self.y) |
---|
895 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
896 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
897 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
898 | |
---|
899 | |
---|
900 | def test1D(self): |
---|
901 | """ Test 1D model for a HardsphereStructure""" |
---|
902 | self.assertAlmostEqual(self.comp.run(0.001),0.209128, 4) |
---|
903 | |
---|
904 | def test1D_2(self): |
---|
905 | """ Test 2D model for a HardsphereStructure""" |
---|
906 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.209128, 4) |
---|
907 | |
---|
908 | def testEval_1D(self): |
---|
909 | """ Test 1D model for a HardsphereStructure with evalDistribution""" |
---|
910 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
911 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
912 | |
---|
913 | def testEval_2D(self): |
---|
914 | """ Test 2D model for a HardsphereStructure with evalDistribution""" |
---|
915 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
916 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
917 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
918 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
919 | |
---|
920 | |
---|
921 | class TestStickyHSStructure(unittest.TestCase): |
---|
922 | """ Unit tests for StickyHSStructure""" |
---|
923 | |
---|
924 | def setUp(self): |
---|
925 | from sans.models.StickyHSStructure import StickyHSStructure |
---|
926 | self.comp = StickyHSStructure() |
---|
927 | self.comp.setParam("effect_radius",50.0) |
---|
928 | self.comp.setParam("volfraction",0.1) |
---|
929 | self.comp.setParam("perturb",0.05) |
---|
930 | self.comp.setParam("stickiness",0.2) |
---|
931 | |
---|
932 | self.x = numpy.array([0.4, 1.3]) |
---|
933 | self.y = numpy.array([0.5, 1.57]) |
---|
934 | |
---|
935 | self.x_array = self.comp.evalDistribution(self.x) |
---|
936 | self.y_array = self.comp.evalDistribution(self.y) |
---|
937 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
938 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
939 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
940 | |
---|
941 | def test1D(self): |
---|
942 | """ Test 1D model for a StickyHSStructure""" |
---|
943 | self.assertAlmostEqual(self.comp.run(0.001),1.09718, 4) |
---|
944 | |
---|
945 | def test1D_2(self): |
---|
946 | """ Test 2D model for a StickyHSStructure""" |
---|
947 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),1.09718, 4) |
---|
948 | |
---|
949 | def testEval_1D(self): |
---|
950 | """ Test 1D model for a StickyHSStructure with evalDistribution""" |
---|
951 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
952 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
953 | |
---|
954 | |
---|
955 | def testEval_2D(self): |
---|
956 | """ Test 2D model for a StickyHSStructure with evalDistribution""" |
---|
957 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
958 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
959 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
960 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
961 | |
---|
962 | |
---|
963 | |
---|
964 | class TestHayterMSAStructure(unittest.TestCase): |
---|
965 | """ Unit tests for HayterMSAStructure""" |
---|
966 | |
---|
967 | def setUp(self): |
---|
968 | from sans.models.HayterMSAStructure import HayterMSAStructure |
---|
969 | self.comp = HayterMSAStructure() |
---|
970 | self.comp.setParam("effect_radius",20.75) |
---|
971 | self.comp.setParam("charge",19.0) |
---|
972 | self.comp.setParam("volfraction",0.0192 ) |
---|
973 | self.comp.setParam("temperature",298) |
---|
974 | self.comp.setParam("saltconc",0.0) |
---|
975 | self.comp.setParam("dielectconst",78) |
---|
976 | |
---|
977 | self.x = numpy.array([0.4, 1.3]) |
---|
978 | self.y = numpy.array([0.5, 1.57]) |
---|
979 | |
---|
980 | self.x_array = self.comp.evalDistribution(self.x) |
---|
981 | self.y_array = self.comp.evalDistribution(self.y) |
---|
982 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
983 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
984 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
985 | |
---|
986 | def test1D(self): |
---|
987 | """ Test 1D model for a HayterMSAStructure""" |
---|
988 | self.assertAlmostEqual(self.comp.run(0.001),0.0712928, 4) |
---|
989 | |
---|
990 | def test1D_2(self): |
---|
991 | """ Test 2D model for a HayterMSAStructure""" |
---|
992 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.0712928, 4) |
---|
993 | |
---|
994 | def testEval_1D(self): |
---|
995 | """ Test 1D model for a HayterMSAStructure with evalDistribution""" |
---|
996 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
997 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
998 | |
---|
999 | def testEval_2D(self): |
---|
1000 | """ Test 2D model for a HayterMSAStructure with evalDistribution""" |
---|
1001 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1002 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1003 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1004 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1005 | |
---|
1006 | |
---|
1007 | |
---|
1008 | class TestBEPolyelectrolyte(unittest.TestCase): |
---|
1009 | """ Unit tests for BEPolyelectrolyte""" |
---|
1010 | |
---|
1011 | def setUp(self): |
---|
1012 | from sans.models.BEPolyelectrolyte import BEPolyelectrolyte |
---|
1013 | self.comp = BEPolyelectrolyte() |
---|
1014 | |
---|
1015 | self.comp.setParam('k',10) |
---|
1016 | self.comp.setParam('lb',7.1) |
---|
1017 | self.comp.setParam('h',12) |
---|
1018 | self.comp.setParam('b',10) |
---|
1019 | self.comp.setParam('cs', 0.0) |
---|
1020 | self.comp.setParam('alpha',0.05) |
---|
1021 | self.comp.setParam('c', 0.7) |
---|
1022 | self.comp.setParam('background',0.001) |
---|
1023 | |
---|
1024 | self.x = numpy.array([0.4, 1.3]) |
---|
1025 | self.y = numpy.array([0.5, 1.57]) |
---|
1026 | |
---|
1027 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1028 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1029 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1030 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1031 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1032 | |
---|
1033 | def test1D(self): |
---|
1034 | """ Test 1D model for a BEPolyelectrolyte""" |
---|
1035 | self.assertAlmostEqual(self.comp.run(0.001),0.0948, 3) |
---|
1036 | |
---|
1037 | def test1D_2(self): |
---|
1038 | """ Test 2D model for a BEPolyelectrolyte""" |
---|
1039 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),0.0948, 3) |
---|
1040 | |
---|
1041 | def testEval_1D(self): |
---|
1042 | """ Test 1D model for a BEPolyelectrolyte with evalDistribution""" |
---|
1043 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1044 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1045 | |
---|
1046 | |
---|
1047 | def testEval_2D(self): |
---|
1048 | """ Test 2D model for a BEPolyelectrolyte with evalDistribution""" |
---|
1049 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1050 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1051 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1052 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1053 | |
---|
1054 | |
---|
1055 | class TestDABModel(unittest.TestCase): |
---|
1056 | """ Unit tests for DABModel""" |
---|
1057 | |
---|
1058 | def setUp(self): |
---|
1059 | from sans.models.DABModel import DABModel |
---|
1060 | self.comp = DABModel() |
---|
1061 | self.comp.setParam('length',40.0) |
---|
1062 | self.comp.setParam('scale',10.0) |
---|
1063 | self.comp.setParam('background',1.0) |
---|
1064 | |
---|
1065 | self.x = numpy.array([0.4, 1.3]) |
---|
1066 | self.y = numpy.array([0.5, 1.57]) |
---|
1067 | |
---|
1068 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1069 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1070 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1071 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1072 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1073 | |
---|
1074 | def test1D(self): |
---|
1075 | """ Test 1D model for a DABModel""" |
---|
1076 | self.assertAlmostEqual(self.comp.run(0.001),10.9681, 3) |
---|
1077 | |
---|
1078 | def test1D_2(self): |
---|
1079 | """ Test 2D model for a DABModel""" |
---|
1080 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),10.9681, 3) |
---|
1081 | |
---|
1082 | def testEval_1D(self): |
---|
1083 | """ Test 1D model for a DABModel with evalDistribution""" |
---|
1084 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1085 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1086 | |
---|
1087 | |
---|
1088 | def testEval_2D(self): |
---|
1089 | """ Test 2D model for a DABModel with evalDistribution""" |
---|
1090 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1091 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1092 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1093 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1094 | |
---|
1095 | |
---|
1096 | |
---|
1097 | class TestGuinierModel(unittest.TestCase): |
---|
1098 | """ Unit tests for Guinier Model""" |
---|
1099 | |
---|
1100 | def setUp(self): |
---|
1101 | from sans.models.GuinierModel import GuinierModel |
---|
1102 | self.comp = GuinierModel() |
---|
1103 | self.comp.setParam('scale',1.0) |
---|
1104 | self.comp.setParam('rg', 60) |
---|
1105 | |
---|
1106 | self.x = numpy.array([0.4, 1.3]) |
---|
1107 | self.y = numpy.array([0.5, 1.57]) |
---|
1108 | |
---|
1109 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1110 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1111 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1112 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1113 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1114 | |
---|
1115 | |
---|
1116 | def test1D(self): |
---|
1117 | """ Test 1D model for a GuinierModel""" |
---|
1118 | self.assertAlmostEqual(self.comp.run(1.0), 5.6387e-5, 4) |
---|
1119 | |
---|
1120 | def test1D_2(self): |
---|
1121 | """ Test 2D model for a GuinierModel""" |
---|
1122 | self.assertAlmostEqual(self.comp.run([1.0, 1.3]), 5.6387e-5, 4) |
---|
1123 | from sans.models.GuinierModel import GuinierModel |
---|
1124 | self.shape_indep_list.append(GuinierModel ) |
---|
1125 | |
---|
1126 | def testEval_1D(self): |
---|
1127 | """ Test 1D model for a GuinierModel with evalDistribution""" |
---|
1128 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1129 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1130 | |
---|
1131 | def testEval_2D(self): |
---|
1132 | """ Test 2D model for a GuinierModel with evalDistribution""" |
---|
1133 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1134 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1135 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1136 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1137 | |
---|
1138 | |
---|
1139 | |
---|
1140 | class TestDebyeModel(unittest.TestCase): |
---|
1141 | """ Unit tests for Debye Model""" |
---|
1142 | |
---|
1143 | def setUp(self): |
---|
1144 | from sans.models.DebyeModel import DebyeModel |
---|
1145 | self.comp = DebyeModel() |
---|
1146 | self.comp.setParam('rg', 50.0) |
---|
1147 | self.comp.setParam('scale',1.0) |
---|
1148 | self.comp.setParam('background',0.001) |
---|
1149 | |
---|
1150 | self.x = numpy.array([0.4, 1.3]) |
---|
1151 | self.y = numpy.array([0.5, 1.57]) |
---|
1152 | |
---|
1153 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1154 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1155 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1156 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1157 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1158 | |
---|
1159 | def test1D(self): |
---|
1160 | """ Test 1D model for a DebyeModel""" |
---|
1161 | self.assertAlmostEqual(self.comp.run(0.001),1.00017,4) |
---|
1162 | |
---|
1163 | def test1D_2(self): |
---|
1164 | """ Test 2D model for a DebyeModel""" |
---|
1165 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),1.00017,4) |
---|
1166 | |
---|
1167 | def testEval_1D(self): |
---|
1168 | """ Test 1D model for a DebyeModel with evalDistribution""" |
---|
1169 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1170 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1171 | |
---|
1172 | def testEval_2D(self): |
---|
1173 | """ Test 2D model for a DebyeModel with evalDistribution""" |
---|
1174 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1175 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1176 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1177 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1178 | |
---|
1179 | |
---|
1180 | class TestPorodModel(unittest.TestCase): |
---|
1181 | """ Unit tests for PorodModel""" |
---|
1182 | |
---|
1183 | def setUp(self): |
---|
1184 | from sans.models.PorodModel import PorodModel |
---|
1185 | self.comp = PorodModel() |
---|
1186 | self.comp.setParam('scale', 1.0) |
---|
1187 | self.comp.setParam('background', 0.0) |
---|
1188 | |
---|
1189 | self.x = numpy.array([0.4, 1.3]) |
---|
1190 | self.y = numpy.array([0.5, 1.57]) |
---|
1191 | |
---|
1192 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1193 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1194 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1195 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1196 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1197 | |
---|
1198 | def test1D(self): |
---|
1199 | """ Test 1D model for a PorodModel""" |
---|
1200 | self.assertEquals(self.comp.run(0.5), 16) |
---|
1201 | |
---|
1202 | def test1D_2(self): |
---|
1203 | """ Test 2D model for a PorodModel""" |
---|
1204 | self.assertEquals(self.comp.run([0.5, 1.3]),16) |
---|
1205 | |
---|
1206 | def testEval_1D(self): |
---|
1207 | """ Test 1D model for a PorodModel with evalDistribution""" |
---|
1208 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1209 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1210 | |
---|
1211 | def testEval_2D(self): |
---|
1212 | """ Test 2D model for a PorodModel with evalDistribution""" |
---|
1213 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1214 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1215 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1216 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1217 | |
---|
1218 | def testCreaticalPt(self): |
---|
1219 | """ Test for critical point for PorodModel run""" |
---|
1220 | self.assertRaises(ZeroDivisionError, self.comp.run, 0.0) |
---|
1221 | |
---|
1222 | |
---|
1223 | class TestPeakGaussModel(unittest.TestCase): |
---|
1224 | """ Unit tests for PeakGaussModel""" |
---|
1225 | |
---|
1226 | def setUp(self): |
---|
1227 | from sans.models.PeakGaussModel import PeakGaussModel |
---|
1228 | self.comp = PeakGaussModel() |
---|
1229 | self.comp.setParam('scale', 100) |
---|
1230 | self.comp.setParam('B', 0.005) |
---|
1231 | self.comp.setParam('q0',0.05) |
---|
1232 | self.comp.setParam('background',1.0) |
---|
1233 | |
---|
1234 | self.x = numpy.array([0.4, 1.3]) |
---|
1235 | self.y = numpy.array([0.5, 1.57]) |
---|
1236 | |
---|
1237 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1238 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1239 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1240 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1241 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1242 | |
---|
1243 | def test1D(self): |
---|
1244 | """ Test 1D model for a PeakGauss Model""" |
---|
1245 | self.assertEquals(self.comp.run(0.001),1) |
---|
1246 | |
---|
1247 | def test1D_2(self): |
---|
1248 | """ Test 2D model for a PeakGauss Model""" |
---|
1249 | self.assertEquals(self.comp.run([0.001, 1.3]),1) |
---|
1250 | |
---|
1251 | def testEval_1D(self): |
---|
1252 | """ Test 1D model for a PeakGauss Model with evalDistribution""" |
---|
1253 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1254 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1255 | |
---|
1256 | def testEval_2D(self): |
---|
1257 | """ Test 2D model for a PeakGauss Model with evalDistribution""" |
---|
1258 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1259 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1260 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1261 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1262 | |
---|
1263 | |
---|
1264 | class TestPeakLorentzModel(unittest.TestCase): |
---|
1265 | """ Unit tests for PeakLorentzModel""" |
---|
1266 | |
---|
1267 | def setUp(self): |
---|
1268 | from sans.models.PeakLorentzModel import PeakLorentzModel |
---|
1269 | self.comp = PeakLorentzModel() |
---|
1270 | self.comp.setParam('scale', 100) |
---|
1271 | self.comp.setParam('B', 0.005) |
---|
1272 | self.comp.setParam('q0',0.05) |
---|
1273 | self.comp.setParam('background',1.0) |
---|
1274 | |
---|
1275 | self.x = numpy.array([0.4, 1.3]) |
---|
1276 | self.y = numpy.array([0.5, 1.57]) |
---|
1277 | |
---|
1278 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1279 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1280 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1281 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1282 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1283 | |
---|
1284 | def test1D(self): |
---|
1285 | """ Test 1D model for a PeakLorentz Model""" |
---|
1286 | self.assertAlmostEqual(self.comp.run(0.001), 2.0305, 3) |
---|
1287 | |
---|
1288 | def test1D_2(self): |
---|
1289 | """ Test 2D model for a PeakLorentz Model""" |
---|
1290 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]), 2.0305, 3) |
---|
1291 | |
---|
1292 | def testEval_1D(self): |
---|
1293 | """ Test 1D model for a PeakLorentz Model with evalDistribution""" |
---|
1294 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1295 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1296 | |
---|
1297 | def testEval_2D(self): |
---|
1298 | """ Test 2D model for a PeakLorentz Model with evalDistribution""" |
---|
1299 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1300 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1301 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1302 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1303 | |
---|
1304 | |
---|
1305 | class TestFractalAbsModel(unittest.TestCase): |
---|
1306 | """ Unit tests for FractalAbsModel""" |
---|
1307 | |
---|
1308 | def setUp(self): |
---|
1309 | from sans.models.FractalAbsModel import FractalAbsModel |
---|
1310 | self.comp = FractalAbsModel() |
---|
1311 | self.comp.setParam('scale', 0.05) |
---|
1312 | self.comp.setParam('radius', 5.0) |
---|
1313 | self.comp.setParam('fractal_dim', 2.0) |
---|
1314 | self.comp.setParam('corr_length',100.0) |
---|
1315 | self.comp.setParam('block_sld', 2.0e-6) |
---|
1316 | self.comp.setParam('solvent_sld', 6.35e-6) |
---|
1317 | self.comp.setParam('background',0.0) |
---|
1318 | |
---|
1319 | self.x = numpy.array([0.4, 1.3]) |
---|
1320 | self.y = numpy.array([0.5, 1.57]) |
---|
1321 | |
---|
1322 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1323 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1324 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1325 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1326 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1327 | |
---|
1328 | def test1D(self): |
---|
1329 | """ Test 1D model for a Fractal Abs Model""" |
---|
1330 | self.assertAlmostEqual(self.comp.run(0.001), 39.2881, 3) |
---|
1331 | |
---|
1332 | def test1D_2(self): |
---|
1333 | """ Test 2D model for a Fractal Abs Model""" |
---|
1334 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]), 39.2881, 3) |
---|
1335 | |
---|
1336 | def testEval_1D(self): |
---|
1337 | """ Test 1D model for a Fractal Abs Model with evalDistribution""" |
---|
1338 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1339 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1340 | |
---|
1341 | def testEval_2D(self): |
---|
1342 | """ Test 2D model for a Fractal Abs Model with evalDistribution""" |
---|
1343 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1344 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1345 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1346 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1347 | |
---|
1348 | |
---|
1349 | class TestFractalModel(unittest.TestCase): |
---|
1350 | """ Unit tests for FractalModel""" |
---|
1351 | |
---|
1352 | def setUp(self): |
---|
1353 | from sans.models.FractalModel import FractalModel |
---|
1354 | self.comp = FractalModel() |
---|
1355 | self.comp.setParam('scale', 0.05) |
---|
1356 | self.comp.setParam('radius', 5.0) |
---|
1357 | self.comp.setParam('fractal_dim', 2.0) |
---|
1358 | self.comp.setParam('corr_length',100.0) |
---|
1359 | self.comp.setParam('block_sld', 2.0e-6) |
---|
1360 | self.comp.setParam('solvent_sld', 6.35e-6) |
---|
1361 | self.comp.setParam('background',0.0) |
---|
1362 | |
---|
1363 | self.x = numpy.array([0.4, 1.3]) |
---|
1364 | self.y = numpy.array([0.5, 1.57]) |
---|
1365 | |
---|
1366 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1367 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1368 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1369 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1370 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1371 | |
---|
1372 | def test1D(self): |
---|
1373 | """ Test 1D model for a Fractal Model""" |
---|
1374 | self.assertAlmostEqual(self.comp.run(0.001), 39.2881, 3) |
---|
1375 | |
---|
1376 | def test1D_2(self): |
---|
1377 | """ Test 2D model for a Fractal Model""" |
---|
1378 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]), 39.2881, 3) |
---|
1379 | |
---|
1380 | def testEval_1D(self): |
---|
1381 | """ Test 1D model for a Fractal Model with evalDistribution""" |
---|
1382 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1383 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1384 | |
---|
1385 | def testEval_2D(self): |
---|
1386 | """ Test 2D model for a Fractal Model with evalDistribution""" |
---|
1387 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1388 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1389 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1390 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1391 | |
---|
1392 | |
---|
1393 | class TestLorentzModel(unittest.TestCase): |
---|
1394 | """ Unit tests for LorentzModel""" |
---|
1395 | |
---|
1396 | def setUp(self): |
---|
1397 | from sans.models.LorentzModel import LorentzModel |
---|
1398 | self.comp = LorentzModel() |
---|
1399 | self.comp.setParam("background",1) |
---|
1400 | self.comp.setParam("length",50) |
---|
1401 | self.comp.setParam("scale",100) |
---|
1402 | |
---|
1403 | self.x = numpy.array([0.4, 1.3]) |
---|
1404 | self.y = numpy.array([0.5, 1.57]) |
---|
1405 | |
---|
1406 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1407 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1408 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1409 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1410 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1411 | |
---|
1412 | def test1D(self): |
---|
1413 | """ Test 1D model for a Lorentz Model""" |
---|
1414 | self.assertAlmostEqual(self.comp.run(0.001),100.751, 2) |
---|
1415 | |
---|
1416 | def test1D_2(self): |
---|
1417 | """ Test 2D model for a Lorentz Model""" |
---|
1418 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),100.751, 2) |
---|
1419 | |
---|
1420 | def testEval_1D(self): |
---|
1421 | """ Test 1D model for a Lorentz Model with evalDistribution""" |
---|
1422 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1423 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1424 | |
---|
1425 | def testEval_2D(self): |
---|
1426 | """ Test 2D model for a Lorentz Model with evalDistribution""" |
---|
1427 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1428 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1429 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1430 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1431 | |
---|
1432 | class TestPowerLawAbsModel(unittest.TestCase): |
---|
1433 | """ Unit tests for PowerLawAbsModel""" |
---|
1434 | |
---|
1435 | def setUp(self): |
---|
1436 | from sans.models.PowerLawAbsModel import PowerLawAbsModel |
---|
1437 | self.comp = PowerLawAbsModel() |
---|
1438 | self.comp.setParam("background",1) |
---|
1439 | self.comp.setParam("m",4) |
---|
1440 | self.comp.setParam("scale",1e-6) |
---|
1441 | |
---|
1442 | self.x = numpy.array([0.4, 1.3]) |
---|
1443 | self.y = numpy.array([0.5, 1.57]) |
---|
1444 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1445 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1446 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1447 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1448 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1449 | |
---|
1450 | def test1D(self): |
---|
1451 | """ Test 1D model for a PowerLawAbs Model""" |
---|
1452 | self.assertAlmostEqual(self.comp.run(0.19189), 1.00074,4) |
---|
1453 | |
---|
1454 | def test1D_2(self): |
---|
1455 | """ Test 2D model for a PowerLawAbs Model""" |
---|
1456 | self.assertAlmostEqual(self.comp.run([0.19189,1.3]), 1.00074,4) |
---|
1457 | |
---|
1458 | def testEval_1D(self): |
---|
1459 | """ Test 1D model for a PowerLawAbs Model with evalDistribution""" |
---|
1460 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1461 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1462 | |
---|
1463 | def testEval_2D(self): |
---|
1464 | """ Test 2D model for a PowerLawAbs Model with evalDistribution""" |
---|
1465 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1466 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1467 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1468 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1469 | |
---|
1470 | class TestPowerLawModel(unittest.TestCase): |
---|
1471 | """ Unit tests for PowerLawModel""" |
---|
1472 | |
---|
1473 | def setUp(self): |
---|
1474 | from sans.models.PowerLawModel import PowerLawModel |
---|
1475 | self.comp = PowerLawModel() |
---|
1476 | self.comp.setParam("background",1) |
---|
1477 | self.comp.setParam("m",4) |
---|
1478 | self.comp.setParam("scale",1e-6) |
---|
1479 | |
---|
1480 | self.x = numpy.array([0.4, 1.3]) |
---|
1481 | self.y = numpy.array([0.5, 1.57]) |
---|
1482 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1483 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1484 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1485 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1486 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1487 | |
---|
1488 | def test1D(self): |
---|
1489 | """ Test 1D model for a PowerLaw Model""" |
---|
1490 | self.assertAlmostEquals(self.comp.run(0.19189), 1.00074,4) |
---|
1491 | |
---|
1492 | def test1D_2(self): |
---|
1493 | """ Test 2D model for a PowerLawModel""" |
---|
1494 | self.assertAlmostEquals(self.comp.run([0.19189,1.3]), 1.00074,4) |
---|
1495 | |
---|
1496 | def testEval_1D(self): |
---|
1497 | """ Test 1D model for a PowerLawModel with evalDistribution""" |
---|
1498 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1499 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1500 | |
---|
1501 | def testEval_2D(self): |
---|
1502 | """ Test 2D model for a PowerLawModel with evalDistribution""" |
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1503 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
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1504 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
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1505 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
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1506 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
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1507 | |
---|
1508 | |
---|
1509 | class TestTeubnerStreyModel(unittest.TestCase): |
---|
1510 | """ Unit tests for TeubnerStreyModel""" |
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1511 | |
---|
1512 | def setUp(self): |
---|
1513 | from sans.models.TeubnerStreyModel import TeubnerStreyModel |
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1514 | self.comp = TeubnerStreyModel() |
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1515 | self.comp.setParam("background",0.1) |
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1516 | self.comp.setParam("c1",-30) |
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1517 | self.comp.setParam("c2",5000) |
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1518 | self.comp.setParam("scale",0.1) |
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1519 | |
---|
1520 | self.x = numpy.array([0.4, 1.3]) |
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1521 | self.y = numpy.array([0.5, 1.57]) |
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1522 | self.x_array = self.comp.evalDistribution(self.x) |
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1523 | self.y_array = self.comp.evalDistribution(self.y) |
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1524 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1525 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
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1526 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
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1527 | |
---|
1528 | def test1D(self): |
---|
1529 | """ Test 1D model for a TeubnerStrey Model""" |
---|
1530 | self.assertAlmostEqual(self.comp.run(0.001),10.103, 1) |
---|
1531 | |
---|
1532 | def test1D_2(self): |
---|
1533 | """ Test 2D model for a TeubnerStrey Model""" |
---|
1534 | self.assertAlmostEqual(self.comp.run([0.001, 1.3]),10.103, 1) |
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1535 | |
---|
1536 | def testEval_1D(self): |
---|
1537 | """ Test 1D model for a TeubnerStrey with evalDistribution""" |
---|
1538 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1539 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
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1540 | |
---|
1541 | def testEval_2D(self): |
---|
1542 | """ Test 2D model for a TeubnerStrey with evalDistribution""" |
---|
1543 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1544 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1545 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1546 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1547 | |
---|
1548 | |
---|
1549 | class TestLineModel(unittest.TestCase): |
---|
1550 | """ Unit tests for LineModel""" |
---|
1551 | |
---|
1552 | def setUp(self): |
---|
1553 | from sans.models.LineModel import LineModel |
---|
1554 | self.comp = LineModel() |
---|
1555 | self.comp.setParam("A",1) |
---|
1556 | self.comp.setParam("B",1) |
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1557 | |
---|
1558 | self.x = numpy.array([0.4, 1.3]) |
---|
1559 | self.y = numpy.array([0.5, 1.57]) |
---|
1560 | self.x_array = self.comp.evalDistribution(self.x) |
---|
1561 | self.y_array = self.comp.evalDistribution(self.y) |
---|
1562 | qx_prime = numpy.reshape(self.x, [1,len(self.x)]) |
---|
1563 | qy_prime = numpy.reshape(self.y, [len(self.y),1]) |
---|
1564 | self.xy_matrix = self.comp.evalDistribution([qx_prime, qy_prime]) |
---|
1565 | |
---|
1566 | def test1D(self): |
---|
1567 | """ Test 1D model for a Line Model""" |
---|
1568 | self.assertEquals(self.comp.run(1.0),2) |
---|
1569 | |
---|
1570 | def testEval_1D(self): |
---|
1571 | """ Test 1D model for a Line with evalDistribution""" |
---|
1572 | self.assertEquals(self.comp.run(0.4),self.x_array[0]) |
---|
1573 | self.assertEquals(self.comp.run(1.3),self.x_array[1]) |
---|
1574 | |
---|
1575 | def testEval_2D(self): |
---|
1576 | """ Test 2D model for a Line with evalDistribution""" |
---|
1577 | self.assertAlmostEquals(self.comp.runXY([0.4, 0.5]),self.xy_matrix[0][0],8) |
---|
1578 | self.assertAlmostEquals(self.comp.runXY([0.4,1.57]),self.xy_matrix[1][0], 8) |
---|
1579 | self.assertAlmostEquals(self.comp.runXY([1.3, 0.5]),self.xy_matrix[0][1],8) |
---|
1580 | self.assertAlmostEquals(self.comp.runXY([1.3, 1.57]),self.xy_matrix[1][1],8) |
---|
1581 | |
---|
1582 | |
---|
1583 | if __name__ == '__main__': |
---|
1584 | unittest.main() |
---|