[27a0771] | 1 | /** |
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| 2 | This software was developed by the University of Tennessee as part of the |
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| 3 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 4 | project funded by the US National Science Foundation. |
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| 5 | |
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| 6 | If you use DANSE applications to do scientific research that leads to |
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| 7 | publication, we ask that you acknowledge the use of the software with the |
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| 8 | following sentence: |
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| 9 | |
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| 10 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
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| 11 | |
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| 12 | copyright 2008, University of Tennessee |
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| 13 | */ |
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| 14 | |
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| 15 | /** |
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| 16 | * Scattering model classes |
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| 17 | * The classes use the IGOR library found in |
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| 18 | * sansmodels/src/libigor |
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| 19 | * |
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| 20 | * TODO: refactor so that we pull in the old sansmodels.c_extensions |
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| 21 | * TODO: add 2D function |
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| 22 | */ |
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| 23 | |
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| 24 | #include <math.h> |
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| 25 | #include "models.hh" |
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| 26 | #include "parameters.hh" |
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| 27 | #include <stdio.h> |
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| 28 | using namespace std; |
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| 29 | |
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| 30 | extern "C" { |
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| 31 | #include "libCylinder.h" |
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| 32 | #include "lamellarPS_HG.h" |
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| 33 | } |
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| 34 | |
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| 35 | LamellarPSHGModel :: LamellarPSHGModel() { |
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| 36 | scale = Parameter(1.0); |
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[96b59384] | 37 | spacing = Parameter(40.0, true); |
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| 38 | spacing.set_min(0.0); |
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[27a0771] | 39 | deltaT = Parameter(10.0, true); |
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| 40 | deltaT.set_min(0.0); |
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| 41 | deltaH = Parameter(2.0, true); |
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| 42 | deltaH.set_min(0.0); |
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| 43 | sld_tail = Parameter(4e-7); |
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| 44 | sld_head = Parameter(2e-6); |
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| 45 | sld_solvent = Parameter(6e-6); |
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| 46 | n_plates = Parameter(30); |
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| 47 | caille = Parameter(0.001); |
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| 48 | background = Parameter(0.001); |
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| 49 | |
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| 50 | } |
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| 51 | |
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| 52 | /** |
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| 53 | * Function to evaluate 1D scattering function |
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| 54 | * The NIST IGOR library is used for the actual calculation. |
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| 55 | * @param q: q-value |
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| 56 | * @return: function value |
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| 57 | */ |
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| 58 | double LamellarPSHGModel :: operator()(double q) { |
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| 59 | double dp[10]; |
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| 60 | |
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| 61 | // Fill parameter array for IGOR library |
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| 62 | // Add the background after averaging |
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| 63 | dp[0] = scale(); |
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| 64 | dp[1] = spacing(); |
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| 65 | dp[2] = deltaT(); |
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| 66 | dp[3] = deltaH(); |
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| 67 | dp[4] = sld_tail(); |
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| 68 | dp[5] = sld_head(); |
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| 69 | dp[6] = sld_solvent(); |
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| 70 | dp[7] = n_plates(); |
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| 71 | dp[8] = caille(); |
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[96b59384] | 72 | dp[9] = 0.0; |
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| 73 | |
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[27a0771] | 74 | |
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| 75 | // Get the dispersion points for (deltaT) thickness of the tail |
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| 76 | vector<WeightPoint> weights_deltaT; |
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| 77 | deltaT.get_weights(weights_deltaT); |
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[96b59384] | 78 | |
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[27a0771] | 79 | // Get the dispersion points for (deltaH) thickness of the head |
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| 80 | vector<WeightPoint> weights_deltaH; |
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| 81 | deltaH.get_weights(weights_deltaH); |
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| 82 | |
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[96b59384] | 83 | // Get the dispersion points for spacing |
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| 84 | vector<WeightPoint> weights_spacing; |
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| 85 | spacing.get_weights(weights_spacing); |
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| 86 | |
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[27a0771] | 87 | // Perform the computation, with all weight points |
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| 88 | double sum = 0.0; |
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| 89 | double norm = 0.0; |
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[96b59384] | 90 | |
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[27a0771] | 91 | // Loop over deltaT weight points |
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| 92 | for(int i=0; i< (int)weights_deltaT.size(); i++) { |
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| 93 | dp[2] = weights_deltaT[i].value; |
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| 94 | |
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| 95 | // Loop over deltaH weight points |
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| 96 | for(int j=0; j< (int)weights_deltaH.size(); j++) { |
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| 97 | dp[3] = weights_deltaH[j].value; |
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[96b59384] | 98 | // Loop over spacing weight points |
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| 99 | for(int k=0; k< (int)weights_spacing.size(); k++) { |
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| 100 | dp[1] = weights_spacing[k].value; |
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| 101 | |
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| 102 | sum += weights_deltaT[i].weight * weights_deltaH[j].weight *weights_spacing[k].weight |
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| 103 | *LamellarPS_HG(dp, q); |
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| 104 | norm += weights_deltaT[i].weight * weights_deltaH[j].weight * weights_spacing[k].weight; |
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| 105 | } |
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[27a0771] | 106 | } |
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| 107 | } |
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| 108 | return sum/norm + background(); |
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| 109 | } |
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| 110 | /** |
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| 111 | * Function to evaluate 2D scattering function |
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| 112 | * @param q_x: value of Q along x |
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| 113 | * @param q_y: value of Q along y |
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| 114 | * @return: function value |
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| 115 | */ |
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| 116 | double LamellarPSHGModel :: operator()(double qx, double qy) { |
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[96b59384] | 117 | double q = sqrt(qx*qx + qy*qy); |
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| 118 | return (*this).operator()(q); |
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| 119 | } |
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| 120 | |
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| 121 | /** |
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| 122 | * Function to evaluate 2D scattering function |
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| 123 | * @param pars: parameters of the lamellarPS_HG |
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| 124 | * @param q: q-value |
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| 125 | * @param phi: angle phi |
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| 126 | * @return: function value |
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| 127 | */ |
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| 128 | double LamellarPSHGModel :: evaluate_rphi(double q, double phi) { |
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| 129 | return (*this).operator()(q); |
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| 130 | } |
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[5eb9154] | 131 | /** |
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| 132 | * Function to calculate effective radius |
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| 133 | * @return: effective radius value |
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| 134 | */ |
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| 135 | double LamellarPSHGModel :: calculate_ER() { |
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| 136 | //NOT implemented yet!!! |
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[34c2649] | 137 | return 0.0; |
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[5eb9154] | 138 | } |
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[96b59384] | 139 | |
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| 140 | /* |
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| 141 | double LamellarPSHGModel :: operator()(double qx, double qy) { |
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[27a0771] | 142 | LamellarPSHGParameters dp; |
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| 143 | // Fill parameter array |
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| 144 | dp.scale = scale(); |
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| 145 | dp.spacing = spacing(); |
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| 146 | dp.deltaT = deltaT(); |
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| 147 | dp.deltaH = deltaH(); |
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| 148 | dp.sld_tail = sld_tail(); |
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| 149 | dp.sld_head = sld_head(); |
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| 150 | dp.sld_solvent = sld_solvent(); |
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| 151 | dp.n_plates = n_plates(); |
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| 152 | dp.caille = caille(); |
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| 153 | dp.background = background(); |
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[96b59384] | 154 | |
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[27a0771] | 155 | // Get the dispersion points for the deltaT |
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| 156 | vector<WeightPoint> weights_deltaT; |
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| 157 | deltaT.get_weights(weights_deltaT); |
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| 158 | |
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| 159 | // Get the dispersion points for the deltaH |
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| 160 | vector<WeightPoint> weights_deltaH; |
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| 161 | deltaH.get_weights(weights_deltaH); |
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| 162 | |
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| 163 | // Perform the computation, with all weight points |
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| 164 | double sum = 0.0; |
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| 165 | double norm = 0.0; |
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| 166 | |
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| 167 | // Loop over deltaT weight points |
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| 168 | for(int i=0; i< (int)weights_deltaT.size(); i++) { |
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| 169 | dp.deltaT = weights_deltaT[i].value; |
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[96b59384] | 170 | |
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[27a0771] | 171 | // Loop over deltaH weight points |
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| 172 | for(int j=0; j< (int)weights_deltaH.size(); j++) { |
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| 173 | dp.deltaH = weights_deltaH[j].value; |
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| 174 | |
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[96b59384] | 175 | sum += weights_deltaT[i].weight *weights_deltaH[j].weight *lamellarPS_HG_analytical_2DXY(&dp, qx, qy); |
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| 176 | norm += weights_deltaT[i].weight * weights_deltaH[j].weight; |
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[27a0771] | 177 | } |
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| 178 | } |
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| 179 | return sum/norm + background(); |
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| 180 | } |
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[96b59384] | 181 | */ |
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[27a0771] | 182 | |
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| 183 | |
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