[339ce67] | 1 | /** |
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| 2 | This software was developed by the University of Tennessee as part of the |
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| 3 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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| 4 | project funded by the US National Science Foundation. |
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| 5 | |
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| 6 | If you use DANSE applications to do scientific research that leads to |
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| 7 | publication, we ask that you acknowledge the use of the software with the |
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| 8 | following sentence: |
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| 9 | |
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| 10 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
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| 11 | |
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| 12 | copyright 2008, University of Tennessee |
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| 13 | */ |
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| 14 | |
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| 15 | /** |
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| 16 | * Scattering model classes |
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| 17 | * The classes use the IGOR library found in |
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| 18 | * sansmodels/src/libigor |
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| 19 | */ |
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| 20 | |
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| 21 | #include <math.h> |
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| 22 | #include "models.hh" |
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| 23 | #include "parameters.hh" |
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| 24 | #include <stdio.h> |
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| 25 | using namespace std; |
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| 26 | |
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| 27 | extern "C" { |
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| 28 | #include "libCylinder.h" |
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| 29 | #include "lamellarPC.h" |
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| 30 | } |
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| 31 | |
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| 32 | LamellarPCrystalModel :: LamellarPCrystalModel() { |
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| 33 | scale = Parameter(1.0); |
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| 34 | thickness = Parameter(33.0, true); |
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| 35 | thickness.set_min(0.0); |
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| 36 | Nlayers = Parameter(20.0, true); |
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| 37 | Nlayers.set_min(0.0); |
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| 38 | spacing = Parameter(250); |
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| 39 | pd_spacing = Parameter(0.0); |
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| 40 | sld_layer = Parameter(1.0e-6); |
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| 41 | sld_solvent = Parameter(6.34e-6); |
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| 42 | background = Parameter(0.0); |
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| 43 | |
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| 44 | } |
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| 45 | |
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| 46 | /** |
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| 47 | * Function to evaluate 1D scattering function |
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| 48 | * The NIST IGOR library is used for the actual calculation. |
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| 49 | * @param q: q-value |
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| 50 | * @return: function value |
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| 51 | */ |
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| 52 | double LamellarPCrystalModel :: operator()(double q) { |
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| 53 | double dp[8]; |
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| 54 | |
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| 55 | // Fill parameter array for IGOR library |
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| 56 | // Add the background after averaging |
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| 57 | dp[0] = scale(); |
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| 58 | dp[1] = thickness(); |
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| 59 | dp[2] = Nlayers(); |
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| 60 | dp[3] = spacing(); |
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| 61 | dp[4] = pd_spacing(); |
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| 62 | dp[5] = sld_layer(); |
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| 63 | dp[6] = sld_solvent(); |
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| 64 | dp[7] = 0.0; // Do not apply background here. |
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| 65 | |
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| 66 | // Get the dispersion points for the head thickness |
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| 67 | vector<WeightPoint> weights_thickness; |
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| 68 | thickness.get_weights(weights_thickness); |
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| 69 | |
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| 70 | // Let's provide from the func which is more accurate especially for small q region. |
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| 71 | // Get the dispersion points for the tail length |
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| 72 | //vector<WeightPoint> weights_spacing; |
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| 73 | //spacing.get_weights(weights_spacing); |
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| 74 | |
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| 75 | // Perform the computation, with all weight points |
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| 76 | double sum = 0.0; |
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| 77 | double norm = 0.0; |
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| 78 | |
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| 79 | // Loop over thickness and spacing weight points |
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| 80 | for(int i=0; i< (int)weights_thickness.size(); i++) { |
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| 81 | dp[1] = weights_thickness[i].value; |
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| 82 | //for (int j=0; j< (int)weights_spacing.size(); j++){ |
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| 83 | //dp[3] = weights_spacing[j].value; |
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| 84 | sum += weights_thickness[i].weight*Lamellar_ParaCrystal(dp, q); |
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| 85 | norm += weights_thickness[i].weight; |
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| 86 | //} |
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| 87 | } |
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| 88 | //apply norm and background |
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| 89 | return sum/norm + background(); |
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| 90 | } |
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| 91 | |
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| 92 | /** |
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| 93 | * Function to evaluate 2D scattering function |
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| 94 | * @param q_x: value of Q along x |
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| 95 | * @param q_y: value of Q along y |
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| 96 | * @return: function value |
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| 97 | */ |
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| 98 | |
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| 99 | double LamellarPCrystalModel :: operator()(double qx, double qy) { |
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| 100 | double q = sqrt(qx*qx + qy*qy); |
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| 101 | return (*this).operator()(q); |
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| 102 | } |
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| 103 | |
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| 104 | /** |
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| 105 | * Function to evaluate 2D scattering function |
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| 106 | * @param pars: parameters of the lamellar |
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| 107 | * @param q: q-value |
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| 108 | * @param phi: angle phi |
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| 109 | * @return: function value |
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| 110 | */ |
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| 111 | double LamellarPCrystalModel :: evaluate_rphi(double q, double phi) { |
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| 112 | return (*this).operator()(q); |
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| 113 | } |
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| 114 | /** |
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| 115 | * Function to calculate effective radius |
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| 116 | * @return: effective radius value |
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| 117 | */ |
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| 118 | double LamellarPCrystalModel :: calculate_ER() { |
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| 119 | //NOT implemented yet!!! |
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| 120 | } |
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