1 | /** |
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2 | This software was developed by the University of Tennessee as part of the |
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3 | Distributed Data Analysis of Neutron Scattering Experiments (DANSE) |
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4 | project funded by the US National Science Foundation. |
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5 | |
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6 | If you use DANSE applications to do scientific research that leads to |
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7 | publication, we ask that you acknowledge the use of the software with the |
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8 | following sentence: |
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9 | |
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10 | "This work benefited from DANSE software developed under NSF award DMR-0520547." |
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11 | |
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12 | copyright 2008, University of Tennessee |
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13 | */ |
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14 | |
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15 | /** |
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16 | * Scattering model classes |
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17 | * The classes use the IGOR library found in |
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18 | * sansmodels/src/libigor |
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19 | * |
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20 | * TODO: refactor so that we pull in the old sansmodels.c_extensions |
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21 | */ |
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22 | |
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23 | #include <math.h> |
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24 | #include "models.hh" |
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25 | #include "parameters.hh" |
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26 | #include <stdio.h> |
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27 | using namespace std; |
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28 | |
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29 | extern "C" { |
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30 | #include "libStructureFactor.h" |
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31 | #include "StickyHS.h" |
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32 | } |
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33 | |
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34 | StickyHSStructure :: StickyHSStructure() { |
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35 | radius = Parameter(50.0, true); |
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36 | radius.set_min(0.0); |
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37 | volfraction = Parameter(0.10, true); |
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38 | volfraction.set_min(0.0); |
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39 | perturb = Parameter(0.05, true); |
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40 | perturb.set_min(0.0); |
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41 | stickiness = Parameter(0.20, true);; |
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42 | stickiness.set_min(0.0); |
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43 | } |
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44 | |
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45 | /** |
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46 | * Function to evaluate 1D scattering function |
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47 | * The NIST IGOR library is used for the actual calculation. |
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48 | * @param q: q-value |
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49 | * @return: function value |
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50 | */ |
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51 | double StickyHSStructure :: operator()(double q) { |
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52 | double dp[4]; |
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53 | |
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54 | // Fill parameter array for IGOR library |
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55 | // Add the background after averaging |
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56 | dp[0] = radius(); |
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57 | dp[1] = volfraction(); |
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58 | dp[2] = perturb(); |
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59 | dp[3] = stickiness(); |
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60 | |
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61 | // Get the dispersion points for the radius |
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62 | vector<WeightPoint> weights_rad; |
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63 | radius.get_weights(weights_rad); |
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64 | |
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65 | // Perform the computation, with all weight points |
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66 | double sum = 0.0; |
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67 | double norm = 0.0; |
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68 | |
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69 | // Loop over radius weight points |
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70 | for(int i=0; i<weights_rad.size(); i++) { |
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71 | dp[0] = weights_rad[i].value; |
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72 | |
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73 | sum += weights_rad[i].weight |
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74 | * StickyHS_Struct(dp, q); |
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75 | norm += weights_rad[i].weight; |
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76 | } |
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77 | return sum/norm ; |
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78 | } |
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79 | |
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80 | /** |
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81 | * Function to evaluate 2D scattering function |
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82 | * @param q_x: value of Q along x |
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83 | * @param q_y: value of Q along y |
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84 | * @return: function value |
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85 | */ |
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86 | double StickyHSStructure :: operator()(double qx, double qy) { |
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87 | StickyHSParameters dp; |
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88 | // Fill parameter array |
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89 | dp.radius = radius(); |
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90 | dp.volfraction = volfraction(); |
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91 | dp.perturb = perturb(); |
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92 | dp.stickiness = stickiness(); |
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93 | |
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94 | // Get the dispersion points for the radius |
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95 | vector<WeightPoint> weights_rad; |
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96 | radius.get_weights(weights_rad); |
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97 | |
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98 | // Perform the computation, with all weight points |
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99 | double sum = 0.0; |
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100 | double norm = 0.0; |
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101 | |
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102 | // Loop over radius weight points |
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103 | for(int i=0; i<weights_rad.size(); i++) { |
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104 | dp.radius = weights_rad[i].value; |
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105 | |
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106 | double _ptvalue = weights_rad[i].weight |
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107 | * StickyHS_analytical_2DXY(&dp, qx, qy); |
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108 | sum += _ptvalue; |
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109 | |
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110 | norm += weights_rad[i].weight; |
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111 | } |
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112 | // Averaging in theta needs an extra normalization |
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113 | // factor to account for the sin(theta) term in the |
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114 | // integration (see documentation). |
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115 | return sum/norm; |
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116 | } |
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117 | |
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118 | /** |
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119 | * Function to evaluate 2D scattering function |
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120 | * @param pars: parameters of the cylinder |
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121 | * @param q: q-value |
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122 | * @param phi: angle phi |
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123 | * @return: function value |
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124 | */ |
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125 | double StickyHSStructure :: evaluate_rphi(double q, double phi) { |
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126 | double qx = q*cos(phi); |
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127 | double qy = q*sin(phi); |
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128 | return (*this).operator()(qx, qy); |
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129 | } |
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