source: sasview/sansmodels/src/sans/models/TriaxialEllipsoidModel.py @ 7ad9887

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Last change on this file since 7ad9887 was 7ad9887, checked in by Jae Cho <jhjcho@…>, 15 years ago

Added model descrp.s

  • Property mode set to 100644
File size: 4.5 KB
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1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\triaxial_ellipsoid.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CTriaxialEllipsoidModel
26import copy   
27   
28class TriaxialEllipsoidModel(CTriaxialEllipsoidModel, BaseComponent):
29    """ Class that evaluates a TriaxialEllipsoidModel model.
30        This file was auto-generated from ..\c_extensions\triaxial_ellipsoid.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         scale           = 1.0
35         semi_axisA      = 35.0 [A]
36         semi_axisB      = 100.0 [A]
37         semi_axisC      = 400.0 [A]
38         contrast        = 5.3e-006 [1/A²]
39         background      = 0.0 [1/cm]
40         axis_theta      = 1.0 [rad]
41         axis_phi        = 1.0 [rad]
42         axis_psi        = 0.0 [rad]
43
44    """
45       
46    def __init__(self):
47        """ Initialization """
48       
49        # Initialize BaseComponent first, then sphere
50        BaseComponent.__init__(self)
51        CTriaxialEllipsoidModel.__init__(self)
52       
53        ## Name of the model
54        self.name = "TriaxialEllipsoidModel"
55        ## Model description
56        self.description ="""Note: During fitting ensure that the inequality A<B<C is not
57                violated. Otherwise the calculation will
58                not be correct."""
59       
60                ## Parameter details [units, min, max]
61        self.details = {}
62        self.details['scale'] = ['', None, None]
63        self.details['semi_axisA'] = ['[A]', None, None]
64        self.details['semi_axisB'] = ['[A]', None, None]
65        self.details['semi_axisC'] = ['[A]', None, None]
66        self.details['contrast'] = ['[1/A²]', None, None]
67        self.details['background'] = ['[1/cm]', None, None]
68        self.details['axis_theta'] = ['[rad]', None, None]
69        self.details['axis_phi'] = ['[rad]', None, None]
70        self.details['axis_psi'] = ['[rad]', None, None]
71
72                ## fittable parameters
73        self.fixed=['axis_psi.width', 'axis_phi.width', 'axis_theta.width', 'semi_axisA.width', 'semi_axisB.width', 'semi_axisC.width']
74       
75        ## parameters with orientation
76        self.orientation_params =['axis_psi', 'axis_phi', 'axis_theta', 'axis_psi.width', 'axis_phi.width', 'axis_theta.width']
77   
78    def clone(self):
79        """ Return a identical copy of self """
80        return self._clone(TriaxialEllipsoidModel())   
81   
82    def run(self, x = 0.0):
83        """ Evaluate the model
84            @param x: input q, or [q,phi]
85            @return: scattering function P(q)
86        """
87       
88        return CTriaxialEllipsoidModel.run(self, x)
89   
90    def runXY(self, x = 0.0):
91        """ Evaluate the model in cartesian coordinates
92            @param x: input q, or [qx, qy]
93            @return: scattering function P(q)
94        """
95       
96        return CTriaxialEllipsoidModel.runXY(self, x)
97       
98    def evalDistribition(self, x = []):
99        """ Evaluate the model in cartesian coordinates
100            @param x: input q[], or [qx[], qy[]]
101            @return: scattering function P(q[])
102        """
103        return CTriaxialEllipsoidModel.evalDistribition(self, x)
104       
105    def calculate_ER(self):
106        """ Calculate the effective radius for P(q)*S(q)
107            @return: the value of the effective radius
108        """       
109        return CTriaxialEllipsoidModel.calculate_ER(self)
110       
111    def set_dispersion(self, parameter, dispersion):
112        """
113            Set the dispersion object for a model parameter
114            @param parameter: name of the parameter [string]
115            @dispersion: dispersion object of type DispersionModel
116        """
117        return CTriaxialEllipsoidModel.set_dispersion(self, parameter, dispersion.cdisp)
118       
119   
120# End of file
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