source: sasview/sansmodels/src/sans/models/StickyHSStructure.py @ 5ee2306

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Last change on this file since 5ee2306 was 1ed3834, checked in by Jae Cho <jhjcho@…>, 16 years ago

unit symbol Angst. back to A and re-organized model descriptions

  • Property mode set to 100644
File size: 3.6 KB
Line 
1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\StickyHS.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CStickyHSStructure
26import copy   
27   
28class StickyHSStructure(CStickyHSStructure, BaseComponent):
29    """ Class that evaluates a StickyHSStructure model.
30        This file was auto-generated from ..\c_extensions\StickyHS.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
34         radius          = 50.0 [A]
35         volfraction     = 0.1
36         perturb         = 0.05
37         stickiness      = 0.2
38
39    """
40       
41    def __init__(self):
42        """ Initialization """
43       
44        # Initialize BaseComponent first, then sphere
45        BaseComponent.__init__(self)
46        CStickyHSStructure.__init__(self)
47       
48        ## Name of the model
49        self.name = "StickyHSStructure"
50        ## Model description
51        self.description =""" Structure Factor for interacting particles:                               .
52               
53                The interaction potential is
54               
55                U(r)= inf , r < 2R
56                = -Uo  , 2R < r < 2R + w
57                = 0   , r >= 2R +w
58               
59                R: radius of the hardsphere
60                stickiness = [exp(Uo/kT)]/(12*perturb)
61                perturb = w/(w+ 2R) , 0.01 =< w <= 0.1
62                w: The width of the square well ,w > 0
63                v: The volume fraction , v > 0
64               
65                Ref: Menon, S. V. G.,et.al., J. Chem.
66                Phys., 1991, 95(12), 9186-9190."""
67       
68                ## Parameter details [units, min, max]
69        self.details = {}
70        self.details['radius'] = ['[A]', None, None]
71        self.details['volfraction'] = ['', None, None]
72        self.details['perturb'] = ['', None, None]
73        self.details['stickiness'] = ['', None, None]
74
75                ## fittable parameters
76        self.fixed=['radius.width']
77       
78        ## parameters with orientation
79        self.orientation_params =[]
80   
81    def clone(self):
82        """ Return a identical copy of self """
83        return self._clone(StickyHSStructure())   
84   
85    def run(self, x = 0.0):
86        """ Evaluate the model
87            @param x: input q, or [q,phi]
88            @return: scattering function P(q)
89        """
90       
91        return CStickyHSStructure.run(self, x)
92   
93    def runXY(self, x = 0.0):
94        """ Evaluate the model in cartesian coordinates
95            @param x: input q, or [qx, qy]
96            @return: scattering function P(q)
97        """
98       
99        return CStickyHSStructure.runXY(self, x)
100       
101    def set_dispersion(self, parameter, dispersion):
102        """
103            Set the dispersion object for a model parameter
104            @param parameter: name of the parameter [string]
105            @dispersion: dispersion object of type DispersionModel
106        """
107        return CStickyHSStructure.set_dispersion(self, parameter, dispersion.cdisp)
108       
109   
110# End of file
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