source: sasview/sansmodels/src/sans/models/StackedDisksModel.py @ 68c4e1f

#!/usr/bin/env python

##############################################################################
#       This software was developed by the University of Tennessee as part of the
#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
#       project funded by the US National Science Foundation.
#
#       If you use DANSE applications to do scientific research that leads to
#       publication, we ask that you acknowledge the use of the software with the
#       following sentence:
#
#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
#
#       copyright 2008, University of Tennessee
##############################################################################


""" 
Provide functionality for a C extension model

:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\stacked_disks.h
         AND RE-RUN THE GENERATOR SCRIPT

"""

from sans.models.BaseComponent import BaseComponent
from sans.models.sans_extension.c_models import CStackedDisksModel
import copy    

def create_StackedDisksModel():
    obj = StackedDisksModel()
    #CStackedDisksModel.__init__(obj) is called by StackedDisksModel constructor
    return obj

class StackedDisksModel(CStackedDisksModel, BaseComponent):
    """ 
    Class that evaluates a StackedDisksModel model. 
    This file was auto-generated from ..\c_extensions\stacked_disks.h.
    Refer to that file and the structure it contains
    for details of the model.
    List of default parameters:
         scale           = 0.01 
         radius          = 3000.0 [A]
         core_thick      = 10.0 [A]
         layer_thick     = 15.0 [A]
         core_sld        = 4e-06 [1/A^(2)]
         layer_sld       = -4e-07 [1/A^(2)]
         solvent_sld     = 5e-06 [1/A^(2)]
         n_stacking      = 1.0 
         sigma_d         = 0.0 
         background      = 0.001 [1/cm]
         axis_theta      = 0.0 [rad]
         axis_phi        = 0.0 [rad]

    """
        
    def __init__(self):
        """ Initialization """
        
        # Initialize BaseComponent first, then sphere
        BaseComponent.__init__(self)
        #apply(CStackedDisksModel.__init__, (self,)) 
        CStackedDisksModel.__init__(self)
        
        ## Name of the model
        self.name = "StackedDisksModel"
        ## Model description
        self.description =""" One layer of disk consists of a core, a top layer, and a bottom layer.
                radius =  the radius of the disk
                core_thick = thickness of the core
                layer_thick = thickness of a layer
                core_sld = the SLD of the core
                layer_sld = the SLD of the layers
                n_stacking = the number of the disks
                sigma_d =  Gaussian STD of d-spacing
                solvent_sld = the SLD of the solvent"""
       
        ## Parameter details [units, min, max]
        self.details = {}
        self.details['scale'] = ['', None, None]
        self.details['radius'] = ['[A]', None, None]
        self.details['core_thick'] = ['[A]', None, None]
        self.details['layer_thick'] = ['[A]', None, None]
        self.details['core_sld'] = ['[1/A^(2)]', None, None]
        self.details['layer_sld'] = ['[1/A^(2)]', None, None]
        self.details['solvent_sld'] = ['[1/A^(2)]', None, None]
        self.details['n_stacking'] = ['', None, None]
        self.details['sigma_d'] = ['', None, None]
        self.details['background'] = ['[1/cm]', None, None]
        self.details['axis_theta'] = ['[rad]', None, None]
        self.details['axis_phi'] = ['[rad]', None, None]

        ## fittable parameters
        self.fixed=['core_thick.width', 'layer_thick.width', 'radius.width', 'axis_theta.width', 'axis_phi.width']
        
        ## non-fittable parameters
        self.non_fittable = []
        
        ## parameters with orientation
        self.orientation_params = ['axis_phi', 'axis_theta', 'axis_phi.width', 'axis_theta.width']

    def __setstate__(self, state):
        """
        restore the state of a model from pickle
        """
        self.__dict__, self.params, self.dispersion = state
        
    def __reduce_ex__(self, proto):
        """
        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of 
        c model.
        """
        state = (self.__dict__, self.params, self.dispersion)
        return (create_StackedDisksModel,tuple(), state, None, None)
        
    def clone(self):
        """ Return a identical copy of self """
        return self._clone(StackedDisksModel())   
        
   
    def run(self, x=0.0):
        """ 
        Evaluate the model
        
        :param x: input q, or [q,phi]
        
        :return: scattering function P(q)
        
        """
        
        return CStackedDisksModel.run(self, x)
   
    def runXY(self, x=0.0):
        """ 
        Evaluate the model in cartesian coordinates
        
        :param x: input q, or [qx, qy]
        
        :return: scattering function P(q)
        
        """
        
        return CStackedDisksModel.runXY(self, x)
        
    def evalDistribution(self, x=[]):
        """ 
        Evaluate the model in cartesian coordinates
        
        :param x: input q[], or [qx[], qy[]]
        
        :return: scattering function P(q[])
        
        """
        return CStackedDisksModel.evalDistribution(self, x)
        
    def calculate_ER(self):
        """ 
        Calculate the effective radius for P(q)*S(q)
        
        :return: the value of the effective radius
        
        """       
        return CStackedDisksModel.calculate_ER(self)
        
    def set_dispersion(self, parameter, dispersion):
        """
        Set the dispersion object for a model parameter
        
        :param parameter: name of the parameter [string]
        :param dispersion: dispersion object of type DispersionModel
        
        """
        return CStackedDisksModel.set_dispersion(self, parameter, dispersion.cdisp)
        
   
# End of file