source: sasview/sansmodels/src/sans/models/StackedDisksModel.py @ 4cbaf35

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Last change on this file since 4cbaf35 was fe9c19b4, checked in by Gervaise Alina <gervyh@…>, 15 years ago

implement set and get state

  • Property mode set to 100644
File size: 5.6 KB
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[5068697]1#!/usr/bin/env python
2"""
3        This software was developed by the University of Tennessee as part of the
4        Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
5        project funded by the US National Science Foundation.
6
7        If you use DANSE applications to do scientific research that leads to
8        publication, we ask that you acknowledge the use of the software with the
9        following sentence:
10
11        "This work benefited from DANSE software developed under NSF award DMR-0520547."
12
13        copyright 2008, University of Tennessee
14"""
15
16""" Provide functionality for a C extension model
17
18        WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
19                 DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\stacked_disks.h
20                 AND RE-RUN THE GENERATOR SCRIPT
21
22"""
23
24from sans.models.BaseComponent import BaseComponent
25from sans_extension.c_models import CStackedDisksModel
26import copy   
27   
28class StackedDisksModel(CStackedDisksModel, BaseComponent):
29    """ Class that evaluates a StackedDisksModel model.
[fe9c19b4]30        This file was auto-generated from ..\c_extensions\stacked_disks.h.
31        Refer to that file and the structure it contains
32        for details of the model.
33        List of default parameters:
[5068697]34         scale           = 0.01
35         radius          = 3000.0 [A]
[975ec8e]36         core_thick      = 10.0 [A]
37         layer_thick     = 15.0 [A]
[27972c1d]38         core_sld        = 4e-006 [1/A^(2)]
39         layer_sld       = -4e-007 [1/A^(2)]
40         solvent_sld     = 5e-006 [1/A^(2)]
[975ec8e]41         n_stacking      = 1.0
42         sigma_d         = 0.0
[5068697]43         background      = 0.001 [1/cm]
[975ec8e]44         axis_theta      = 0.0 [rad]
45         axis_phi        = 0.0 [rad]
[5068697]46
47    """
48       
49    def __init__(self):
50        """ Initialization """
51       
52        # Initialize BaseComponent first, then sphere
53        BaseComponent.__init__(self)
54        CStackedDisksModel.__init__(self)
55       
56        ## Name of the model
57        self.name = "StackedDisksModel"
58        ## Model description
[7ad9887]59        self.description =""" One layer of disk consists of a core, a top layer, and a bottom layer.
60                radius =  the radius of the disk
61                core_thick = thickness of the core
62                layer_thick = thickness of a layer
63                core_sld = the SLD of the core
64                layer_sld = the SLD of the layers
65                n_stacking = the number of the disks
66                sigma_d =  Gaussian STD of d-spacing
67                solvent_sld = the SLD of the solvent"""
[5068697]68       
[fe9c19b4]69        ## Parameter details [units, min, max]
[5068697]70        self.details = {}
71        self.details['scale'] = ['', None, None]
72        self.details['radius'] = ['[A]', None, None]
[975ec8e]73        self.details['core_thick'] = ['[A]', None, None]
74        self.details['layer_thick'] = ['[A]', None, None]
[27972c1d]75        self.details['core_sld'] = ['[1/A^(2)]', None, None]
76        self.details['layer_sld'] = ['[1/A^(2)]', None, None]
77        self.details['solvent_sld'] = ['[1/A^(2)]', None, None]
[975ec8e]78        self.details['n_stacking'] = ['', None, None]
79        self.details['sigma_d'] = ['', None, None]
[5068697]80        self.details['background'] = ['[1/cm]', None, None]
81        self.details['axis_theta'] = ['[rad]', None, None]
82        self.details['axis_phi'] = ['[rad]', None, None]
83
[fe9c19b4]84        ## fittable parameters
[975ec8e]85        self.fixed=['core_thick.width', 'layer_thick.width', 'radius.width', 'axis_theta.width', 'axis_phi.width']
[5068697]86       
87        ## parameters with orientation
88        self.orientation_params =['axis_phi', 'axis_theta', 'axis_phi.width', 'axis_theta.width']
89   
90    def clone(self):
91        """ Return a identical copy of self """
92        return self._clone(StackedDisksModel())   
[fe9c19b4]93       
94    def __getstate__(self):
95        """ return object state for pickling and copying """
96        print "__dict__",self.__dict__
97        #self.__dict__['params'] = self.params
98        #self.__dict__['dispersion'] = self.dispersion
99        #self.__dict__['log'] = self.log
100        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
101       
102        return self.__dict__, model_state
103       
104    def __setstate__(self, state):
105        """ create object from pickled state """
106       
107        self.__dict__, model_state = state
108        self.params = model_state['params']
109        self.dispersion = model_state['dispersion']
110        self.log = model_state['log']
111       
[5068697]112   
113    def run(self, x = 0.0):
114        """ Evaluate the model
115            @param x: input q, or [q,phi]
116            @return: scattering function P(q)
117        """
118       
119        return CStackedDisksModel.run(self, x)
120   
121    def runXY(self, x = 0.0):
122        """ Evaluate the model in cartesian coordinates
123            @param x: input q, or [qx, qy]
124            @return: scattering function P(q)
125        """
126       
127        return CStackedDisksModel.runXY(self, x)
128       
[9bd69098]129    def evalDistribition(self, x = []):
130        """ Evaluate the model in cartesian coordinates
131            @param x: input q[], or [qx[], qy[]]
132            @return: scattering function P(q[])
133        """
134        return CStackedDisksModel.evalDistribition(self, x)
135       
[5eb9154]136    def calculate_ER(self):
137        """ Calculate the effective radius for P(q)*S(q)
138            @return: the value of the effective radius
139        """       
140        return CStackedDisksModel.calculate_ER(self)
141       
[5068697]142    def set_dispersion(self, parameter, dispersion):
143        """
144            Set the dispersion object for a model parameter
145            @param parameter: name of the parameter [string]
146            @dispersion: dispersion object of type DispersionModel
147        """
148        return CStackedDisksModel.set_dispersion(self, parameter, dispersion.cdisp)
149       
150   
151# End of file
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