source: sasview/sansmodels/src/sans/models/SquareWellStructure.py @ 463eb76e

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Last change on this file since 463eb76e was c7a7e1b, checked in by Gervaise Alina <gervyh@…>, 14 years ago

working on model pickle

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[1bbf2ac]1#!/usr/bin/env python
2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[1bbf2ac]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[1bbf2ac]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\SquareWell.h
23         AND RE-RUN THE GENERATOR SCRIPT
[1bbf2ac]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CSquareWellStructure
29import copy   
[96656e3]30
31def create_SquareWellStructure():
32    obj = SquareWellStructure()
33    #CSquareWellStructure.__init__(obj) is called by SquareWellStructure constructor
34    return obj
35
[1bbf2ac]36class SquareWellStructure(CSquareWellStructure, BaseComponent):
[79ac6f8]37    """
38    Class that evaluates a SquareWellStructure model.
39    This file was auto-generated from ..\c_extensions\SquareWell.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
[5eb9154]43         effect_radius   = 50.0 [A]
[1bbf2ac]44         volfraction     = 0.04
[0824909]45         welldepth       = 1.5 [kT]
[1bbf2ac]46         wellwidth       = 1.2
47
48    """
49       
50    def __init__(self):
51        """ Initialization """
52       
53        # Initialize BaseComponent first, then sphere
54        BaseComponent.__init__(self)
[96656e3]55        #apply(CSquareWellStructure.__init__, (self,))
[1bbf2ac]56        CSquareWellStructure.__init__(self)
57       
58        ## Name of the model
59        self.name = "SquareWellStructure"
60        ## Model description
[1ed3834]61        self.description =""" Structure Factor for interacting particles:             .
[1bbf2ac]62               
63                The interaction potential is
64               
65                U(r)= inf   , r < 2R
66                = -d    , 2R <= r <=2Rw
67                = 0     , r >= 2Rw
68               
[5eb9154]69                R: effective radius (A)of the particle
[1ed3834]70                v: volume fraction
[1bbf2ac]71                d: well depth
[1ed3834]72                w: well width; multiples of the
73                particle diameter
[1bbf2ac]74               
[1ed3834]75                Ref: Sharma, R. V.; Sharma,
76                K. C., Physica, 1977, 89A, 213."""
[1bbf2ac]77       
[fe9c19b4]78        ## Parameter details [units, min, max]
[1bbf2ac]79        self.details = {}
[5eb9154]80        self.details['effect_radius'] = ['[A]', None, None]
[1bbf2ac]81        self.details['volfraction'] = ['', None, None]
[0824909]82        self.details['welldepth'] = ['[kT]', None, None]
[1bbf2ac]83        self.details['wellwidth'] = ['', None, None]
84
[fe9c19b4]85        ## fittable parameters
[5eb9154]86        self.fixed=['effect_radius.width']
[0824909]87       
[35aface]88        ## non-fittable parameters
[96656e3]89        self.non_fittable = []
[35aface]90       
[0824909]91        ## parameters with orientation
[96656e3]92        self.orientation_params = []
[c7a7e1b]93
94    def __setstate__(self, state):
95        """
96        restore the state of a model from pickle
97        """
98        self.__dict__, self.params, self.dispersion = state
99       
[96656e3]100    def __reduce_ex__(self, proto):
[79ac6f8]101        """
[96656e3]102        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
103        c model.
[79ac6f8]104        """
[c7a7e1b]105        state = (self.__dict__, self.params, self.dispersion)
106        return (create_SquareWellStructure,tuple(), state, None, None)
[fe9c19b4]107       
[96656e3]108    def clone(self):
109        """ Return a identical copy of self """
110        return self._clone(SquareWellStructure())   
[fe9c19b4]111       
[1bbf2ac]112   
[79ac6f8]113    def run(self, x=0.0):
114        """
115        Evaluate the model
116       
117        :param x: input q, or [q,phi]
118       
119        :return: scattering function P(q)
120       
[1bbf2ac]121        """
122       
123        return CSquareWellStructure.run(self, x)
124   
[79ac6f8]125    def runXY(self, x=0.0):
126        """
127        Evaluate the model in cartesian coordinates
128       
129        :param x: input q, or [qx, qy]
130       
131        :return: scattering function P(q)
132       
[1bbf2ac]133        """
134       
135        return CSquareWellStructure.runXY(self, x)
136       
[79ac6f8]137    def evalDistribution(self, x=[]):
138        """
139        Evaluate the model in cartesian coordinates
140       
141        :param x: input q[], or [qx[], qy[]]
142       
143        :return: scattering function P(q[])
144       
[9bd69098]145        """
[f9a1279]146        return CSquareWellStructure.evalDistribution(self, x)
[9bd69098]147       
[5eb9154]148    def calculate_ER(self):
[79ac6f8]149        """
150        Calculate the effective radius for P(q)*S(q)
151       
152        :return: the value of the effective radius
153       
[5eb9154]154        """       
155        return CSquareWellStructure.calculate_ER(self)
156       
[1bbf2ac]157    def set_dispersion(self, parameter, dispersion):
158        """
[79ac6f8]159        Set the dispersion object for a model parameter
160       
161        :param parameter: name of the parameter [string]
162        :param dispersion: dispersion object of type DispersionModel
163       
[1bbf2ac]164        """
165        return CSquareWellStructure.set_dispersion(self, parameter, dispersion.cdisp)
166       
167   
168# End of file
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