source: sasview/sansmodels/src/sans/models/SquareWellStructure.py @ 20f00bed

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Last change on this file since 20f00bed was 35aface, checked in by Jae Cho <jhjcho@…>, 14 years ago

addede new models and attr. non_fittable

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[1bbf2ac]1#!/usr/bin/env python
2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[1bbf2ac]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[1bbf2ac]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\SquareWell.h
23         AND RE-RUN THE GENERATOR SCRIPT
[1bbf2ac]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CSquareWellStructure
29import copy   
30   
31class SquareWellStructure(CSquareWellStructure, BaseComponent):
[79ac6f8]32    """
33    Class that evaluates a SquareWellStructure model.
34    This file was auto-generated from ..\c_extensions\SquareWell.h.
35    Refer to that file and the structure it contains
36    for details of the model.
37    List of default parameters:
[5eb9154]38         effect_radius   = 50.0 [A]
[1bbf2ac]39         volfraction     = 0.04
[0824909]40         welldepth       = 1.5 [kT]
[1bbf2ac]41         wellwidth       = 1.2
42
43    """
44       
45    def __init__(self):
46        """ Initialization """
47       
48        # Initialize BaseComponent first, then sphere
49        BaseComponent.__init__(self)
50        CSquareWellStructure.__init__(self)
51       
52        ## Name of the model
53        self.name = "SquareWellStructure"
54        ## Model description
[1ed3834]55        self.description =""" Structure Factor for interacting particles:             .
[1bbf2ac]56               
57                The interaction potential is
58               
59                U(r)= inf   , r < 2R
60                = -d    , 2R <= r <=2Rw
61                = 0     , r >= 2Rw
62               
[5eb9154]63                R: effective radius (A)of the particle
[1ed3834]64                v: volume fraction
[1bbf2ac]65                d: well depth
[1ed3834]66                w: well width; multiples of the
67                particle diameter
[1bbf2ac]68               
[1ed3834]69                Ref: Sharma, R. V.; Sharma,
70                K. C., Physica, 1977, 89A, 213."""
[1bbf2ac]71       
[fe9c19b4]72        ## Parameter details [units, min, max]
[1bbf2ac]73        self.details = {}
[5eb9154]74        self.details['effect_radius'] = ['[A]', None, None]
[1bbf2ac]75        self.details['volfraction'] = ['', None, None]
[0824909]76        self.details['welldepth'] = ['[kT]', None, None]
[1bbf2ac]77        self.details['wellwidth'] = ['', None, None]
78
[fe9c19b4]79        ## fittable parameters
[5eb9154]80        self.fixed=['effect_radius.width']
[0824909]81       
[35aface]82        ## non-fittable parameters
83        self.non_fittable=[]
84       
[0824909]85        ## parameters with orientation
86        self.orientation_params =[]
[1bbf2ac]87   
88    def clone(self):
89        """ Return a identical copy of self """
90        return self._clone(SquareWellStructure())   
[fe9c19b4]91       
92    def __getstate__(self):
[79ac6f8]93        """
94        return object state for pickling and copying
95        """
[fe9c19b4]96        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
97       
98        return self.__dict__, model_state
99       
100    def __setstate__(self, state):
[79ac6f8]101        """
102        create object from pickled state
103       
104        :param state: the state of the current model
105       
106        """
[fe9c19b4]107       
108        self.__dict__, model_state = state
109        self.params = model_state['params']
110        self.dispersion = model_state['dispersion']
111        self.log = model_state['log']
112       
[1bbf2ac]113   
[79ac6f8]114    def run(self, x=0.0):
115        """
116        Evaluate the model
117       
118        :param x: input q, or [q,phi]
119       
120        :return: scattering function P(q)
121       
[1bbf2ac]122        """
123       
124        return CSquareWellStructure.run(self, x)
125   
[79ac6f8]126    def runXY(self, x=0.0):
127        """
128        Evaluate the model in cartesian coordinates
129       
130        :param x: input q, or [qx, qy]
131       
132        :return: scattering function P(q)
133       
[1bbf2ac]134        """
135       
136        return CSquareWellStructure.runXY(self, x)
137       
[79ac6f8]138    def evalDistribution(self, x=[]):
139        """
140        Evaluate the model in cartesian coordinates
141       
142        :param x: input q[], or [qx[], qy[]]
143       
144        :return: scattering function P(q[])
145       
[9bd69098]146        """
[f9a1279]147        return CSquareWellStructure.evalDistribution(self, x)
[9bd69098]148       
[5eb9154]149    def calculate_ER(self):
[79ac6f8]150        """
151        Calculate the effective radius for P(q)*S(q)
152       
153        :return: the value of the effective radius
154       
[5eb9154]155        """       
156        return CSquareWellStructure.calculate_ER(self)
157       
[1bbf2ac]158    def set_dispersion(self, parameter, dispersion):
159        """
[79ac6f8]160        Set the dispersion object for a model parameter
161       
162        :param parameter: name of the parameter [string]
163        :param dispersion: dispersion object of type DispersionModel
164       
[1bbf2ac]165        """
166        return CSquareWellStructure.set_dispersion(self, parameter, dispersion.cdisp)
167       
168   
169# End of file
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