source: sasview/sansmodels/src/sans/models/SphereModel.py @ c089120

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Last change on this file since c089120 was c7a7e1b, checked in by Gervaise Alina <gervyh@…>, 14 years ago

working on model pickle

  • Property mode set to 100644
File size: 4.9 KB
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1#!/usr/bin/env python
2
3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
16
17
18"""
19Provide functionality for a C extension model
20
21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\sphere.h
23         AND RE-RUN THE GENERATOR SCRIPT
24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CSphereModel
29import copy   
30
31def create_SphereModel():
32    obj = SphereModel()
33    #CSphereModel.__init__(obj) is called by SphereModel constructor
34    return obj
35
36class SphereModel(CSphereModel, BaseComponent):
37    """
38    Class that evaluates a SphereModel model.
39    This file was auto-generated from ..\c_extensions\sphere.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
43         scale           = 1.0
44         radius          = 60.0 [A]
45         sldSph          = 2e-006 [1/A^(2)]
46         sldSolv         = 1e-006 [1/A^(2)]
47         background      = 0.0 [1/cm]
48
49    """
50       
51    def __init__(self):
52        """ Initialization """
53       
54        # Initialize BaseComponent first, then sphere
55        BaseComponent.__init__(self)
56        #apply(CSphereModel.__init__, (self,))
57        CSphereModel.__init__(self)
58       
59        ## Name of the model
60        self.name = "SphereModel"
61        ## Model description
62        self.description ="""P(q)=(scale/V)*[3V(sldSph-sldSolv)*(sin(qR)-qRcos(qR))
63                /(qR)^3]^(2)+bkg
64               
65                bkg:background, R: radius of sphere
66                V:The volume of the scatter
67                sldSph: the SLD of the sphere
68                sldSolv: the SLD of the solvent
69                """
70       
71        ## Parameter details [units, min, max]
72        self.details = {}
73        self.details['scale'] = ['', None, None]
74        self.details['radius'] = ['[A]', None, None]
75        self.details['sldSph'] = ['[1/A^(2)]', None, None]
76        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
77        self.details['background'] = ['[1/cm]', None, None]
78
79        ## fittable parameters
80        self.fixed=['radius.width']
81       
82        ## non-fittable parameters
83        self.non_fittable = []
84       
85        ## parameters with orientation
86        self.orientation_params = []
87
88    def __setstate__(self, state):
89        """
90        restore the state of a model from pickle
91        """
92        self.__dict__, self.params, self.dispersion = state
93       
94    def __reduce_ex__(self, proto):
95        """
96        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
97        c model.
98        """
99        state = (self.__dict__, self.params, self.dispersion)
100        return (create_SphereModel,tuple(), state, None, None)
101       
102    def clone(self):
103        """ Return a identical copy of self """
104        return self._clone(SphereModel())   
105       
106   
107    def run(self, x=0.0):
108        """
109        Evaluate the model
110       
111        :param x: input q, or [q,phi]
112       
113        :return: scattering function P(q)
114       
115        """
116       
117        return CSphereModel.run(self, x)
118   
119    def runXY(self, x=0.0):
120        """
121        Evaluate the model in cartesian coordinates
122       
123        :param x: input q, or [qx, qy]
124       
125        :return: scattering function P(q)
126       
127        """
128       
129        return CSphereModel.runXY(self, x)
130       
131    def evalDistribution(self, x=[]):
132        """
133        Evaluate the model in cartesian coordinates
134       
135        :param x: input q[], or [qx[], qy[]]
136       
137        :return: scattering function P(q[])
138       
139        """
140        return CSphereModel.evalDistribution(self, x)
141       
142    def calculate_ER(self):
143        """
144        Calculate the effective radius for P(q)*S(q)
145       
146        :return: the value of the effective radius
147       
148        """       
149        return CSphereModel.calculate_ER(self)
150       
151    def set_dispersion(self, parameter, dispersion):
152        """
153        Set the dispersion object for a model parameter
154       
155        :param parameter: name of the parameter [string]
156        :param dispersion: dispersion object of type DispersionModel
157       
158        """
159        return CSphereModel.set_dispersion(self, parameter, dispersion.cdisp)
160       
161   
162# End of file
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