source: sasview/sansmodels/src/sans/models/SphereModel.py @ 213892bc

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Last change on this file since 213892bc was 96656e3, checked in by Jae Cho <jhjcho@…>, 14 years ago

update models due to changes of template

  • Property mode set to 100644
File size: 4.6 KB
RevLine 
[ae3ce4e]1#!/usr/bin/env python
[95986b5]2
[79ac6f8]3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
[95986b5]16
17
[79ac6f8]18"""
19Provide functionality for a C extension model
[ae3ce4e]20
[79ac6f8]21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\sphere.h
23         AND RE-RUN THE GENERATOR SCRIPT
[ae3ce4e]24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CSphereModel
29import copy   
[96656e3]30
31def create_SphereModel():
32    obj = SphereModel()
33    #CSphereModel.__init__(obj) is called by SphereModel constructor
34    return obj
35
[ae3ce4e]36class SphereModel(CSphereModel, BaseComponent):
[79ac6f8]37    """
38    Class that evaluates a SphereModel model.
39    This file was auto-generated from ..\c_extensions\sphere.h.
40    Refer to that file and the structure it contains
41    for details of the model.
42    List of default parameters:
[7dde98e]43         scale           = 1.0
[1ed3834]44         radius          = 60.0 [A]
[f10063e]45         sldSph          = 2e-006 [1/A^(2)]
46         sldSolv         = 1e-006 [1/A^(2)]
[0824909]47         background      = 0.0 [1/cm]
[ae3ce4e]48
49    """
50       
51    def __init__(self):
52        """ Initialization """
53       
54        # Initialize BaseComponent first, then sphere
55        BaseComponent.__init__(self)
[96656e3]56        #apply(CSphereModel.__init__, (self,))
[ae3ce4e]57        CSphereModel.__init__(self)
58       
59        ## Name of the model
60        self.name = "SphereModel"
[836fe6e]61        ## Model description
[f10063e]62        self.description ="""P(q)=(scale/V)*[3V(sldSph-sldSolv)*(sin(qR)-qRcos(qR))
[1ed3834]63                /(qR)^3]^(2)+bkg
64               
65                bkg:background, R: radius of sphere
[9316609]66                V:The volume of the scatter
[f10063e]67                sldSph: the SLD of the sphere
68                sldSolv: the SLD of the solvent
[1ed3834]69                """
[836fe6e]70       
[fe9c19b4]71        ## Parameter details [units, min, max]
[ae3ce4e]72        self.details = {}
73        self.details['scale'] = ['', None, None]
[1ed3834]74        self.details['radius'] = ['[A]', None, None]
[f10063e]75        self.details['sldSph'] = ['[1/A^(2)]', None, None]
76        self.details['sldSolv'] = ['[1/A^(2)]', None, None]
[0824909]77        self.details['background'] = ['[1/cm]', None, None]
[7dde98e]78
[fe9c19b4]79        ## fittable parameters
[836fe6e]80        self.fixed=['radius.width']
[25a608f5]81       
[35aface]82        ## non-fittable parameters
[96656e3]83        self.non_fittable = []
[35aface]84       
[25a608f5]85        ## parameters with orientation
[96656e3]86        self.orientation_params = []
[ae3ce4e]87   
[96656e3]88    def __reduce_ex__(self, proto):
[79ac6f8]89        """
[96656e3]90        Overwrite the __reduce_ex__ of PyTypeObject *type call in the init of
91        c model.
[79ac6f8]92        """
[96656e3]93        return (create_SphereModel,tuple())
[fe9c19b4]94       
[96656e3]95    def clone(self):
96        """ Return a identical copy of self """
97        return self._clone(SphereModel())   
[fe9c19b4]98       
[ae3ce4e]99   
[79ac6f8]100    def run(self, x=0.0):
101        """
102        Evaluate the model
103       
104        :param x: input q, or [q,phi]
105       
106        :return: scattering function P(q)
107       
[ae3ce4e]108        """
109       
110        return CSphereModel.run(self, x)
111   
[79ac6f8]112    def runXY(self, x=0.0):
113        """
114        Evaluate the model in cartesian coordinates
115       
116        :param x: input q, or [qx, qy]
117       
118        :return: scattering function P(q)
119       
[ae3ce4e]120        """
121       
122        return CSphereModel.runXY(self, x)
[95986b5]123       
[79ac6f8]124    def evalDistribution(self, x=[]):
125        """
126        Evaluate the model in cartesian coordinates
127       
128        :param x: input q[], or [qx[], qy[]]
129       
130        :return: scattering function P(q[])
131       
[9bd69098]132        """
[f9a1279]133        return CSphereModel.evalDistribution(self, x)
[9bd69098]134       
[5eb9154]135    def calculate_ER(self):
[79ac6f8]136        """
137        Calculate the effective radius for P(q)*S(q)
138       
139        :return: the value of the effective radius
140       
[5eb9154]141        """       
142        return CSphereModel.calculate_ER(self)
143       
[95986b5]144    def set_dispersion(self, parameter, dispersion):
145        """
[79ac6f8]146        Set the dispersion object for a model parameter
147       
148        :param parameter: name of the parameter [string]
149        :param dispersion: dispersion object of type DispersionModel
150       
[95986b5]151        """
152        return CSphereModel.set_dispersion(self, parameter, dispersion.cdisp)
153       
[ae3ce4e]154   
155# End of file
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