source: sasview/sansmodels/src/sans/models/ReflModel.py @ 5650ebf

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Last change on this file since 5650ebf was 4b3d25b, checked in by Jae Cho <jhjcho@…>, 14 years ago

new model and some bug fixes
  • Property mode set to 100644
File size: 9.4 KB
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1#!/usr/bin/env python
2
3##############################################################################
4#       This software was developed by the University of Tennessee as part of the
5#       Distributed Data Analysis of Neutron Scattering Experiments (DANSE)
6#       project funded by the US National Science Foundation.
7#
8#       If you use DANSE applications to do scientific research that leads to
9#       publication, we ask that you acknowledge the use of the software with the
10#       following sentence:
11#
12#       "This work benefited from DANSE software developed under NSF award DMR-0520547."
13#
14#       copyright 2008, University of Tennessee
15##############################################################################
16
17
18"""
19Provide functionality for a C extension model
20
21:WARNING: THIS FILE WAS GENERATED BY WRAPPERGENERATOR.PY
22         DO NOT MODIFY THIS FILE, MODIFY ..\c_extensions\refl.h
23         AND RE-RUN THE GENERATOR SCRIPT
24
25"""
26
27from sans.models.BaseComponent import BaseComponent
28from sans_extension.c_models import CReflModel
29import copy   
30   
31class ReflModel(CReflModel, BaseComponent):
32    """
33    Class that evaluates a ReflModel model.
34    This file was auto-generated from ..\c_extensions\refl.h.
35    Refer to that file and the structure it contains
36    for details of the model.
37    List of default parameters:
38         n_layers        = 1.0
39         scale           = 1.0
40         thick_inter0    = 1.0 [A]
41         func_inter0     = 0.0
42         sld_bottom0     = 2.07e-006 [1/A^(2)]
43         sld_medium      = 1e-006 [1/A^(2)]
44         background      = 0.0
45         sld_flat1       = 4e-006 [1/A^(2)]
46         sld_flat2       = 3.5e-006 [1/A^(2)]
47         sld_flat3       = 4e-006 [1/A^(2)]
48         sld_flat4       = 3.5e-006 [1/A^(2)]
49         sld_flat5       = 4e-006 [1/A^(2)]
50         sld_flat6       = 3.5e-006 [1/A^(2)]
51         sld_flat7       = 4e-006 [1/A^(2)]
52         sld_flat8       = 3.5e-006 [1/A^(2)]
53         sld_flat9       = 4e-006 [1/A^(2)]
54         sld_flat10      = 3.5e-006 [1/A^(2)]
55         thick_inter1    = 1.0 [A]
56         thick_inter2    = 1.0 [A]
57         thick_inter3    = 1.0 [A]
58         thick_inter4    = 1.0 [A]
59         thick_inter5    = 1.0 [A]
60         thick_inter6    = 1.0 [A]
61         thick_inter7    = 1.0 [A]
62         thick_inter8    = 1.0 [A]
63         thick_inter9    = 1.0 [A]
64         thick_inter10   = 1.0 [A]
65         thick_flat1     = 10.0 [A]
66         thick_flat2     = 100.0 [A]
67         thick_flat3     = 100.0 [A]
68         thick_flat4     = 100.0 [A]
69         thick_flat5     = 100.0 [A]
70         thick_flat6     = 100.0 [A]
71         thick_flat7     = 100.0 [A]
72         thick_flat8     = 100.0 [A]
73         thick_flat9     = 100.0 [A]
74         thick_flat10    = 100.0 [A]
75         func_inter1     = 0.0
76         func_inter2     = 0.0
77         func_inter3     = 0.0
78         func_inter4     = 0.0
79         func_inter5     = 0.0
80         func_inter6     = 0.0
81         func_inter7     = 0.0
82         func_inter8     = 0.0
83         func_inter9     = 0.0
84         func_inter10    = 0.0
85
86    """
87       
88    def __init__(self):
89        """ Initialization """
90       
91        # Initialize BaseComponent first, then sphere
92        BaseComponent.__init__(self)
93        CReflModel.__init__(self)
94       
95        ## Name of the model
96        self.name = "ReflModel"
97        ## Model description
98        self.description ="""Calculate neutron reflectivity using the Parratt iterative formula
99                Parameters:
100                background:background
101                scale: scale factor
102                sld_bottom0: the SLD of the substrate
103                sld_medium: the SLD of the incident medium
104                or superstrate
105                sld_flatN: the SLD of the flat region of
106                the N'th layer
107                thick_flatN: the thickness of the flat
108                region of the N'th layer
109                func_interN: the function used to describe
110                the interface of the N'th layer
111                thick_interN: the thickness of the interface
112                of the N'th layer
113                Note: the layer number starts to increase
114                from the bottom (substrate) to the top."""
115       
116        ## Parameter details [units, min, max]
117        self.details = {}
118        self.details['n_layers'] = ['', None, None]
119        self.details['scale'] = ['', None, None]
120        self.details['thick_inter0'] = ['[A]', None, None]
121        self.details['func_inter0'] = ['', None, None]
122        self.details['sld_bottom0'] = ['[1/A^(2)]', None, None]
123        self.details['sld_medium'] = ['[1/A^(2)]', None, None]
124        self.details['background'] = ['', None, None]
125        self.details['sld_flat1'] = ['[1/A^(2)]', None, None]
126        self.details['sld_flat2'] = ['[1/A^(2)]', None, None]
127        self.details['sld_flat3'] = ['[1/A^(2)]', None, None]
128        self.details['sld_flat4'] = ['[1/A^(2)]', None, None]
129        self.details['sld_flat5'] = ['[1/A^(2)]', None, None]
130        self.details['sld_flat6'] = ['[1/A^(2)]', None, None]
131        self.details['sld_flat7'] = ['[1/A^(2)]', None, None]
132        self.details['sld_flat8'] = ['[1/A^(2)]', None, None]
133        self.details['sld_flat9'] = ['[1/A^(2)]', None, None]
134        self.details['sld_flat10'] = ['[1/A^(2)]', None, None]
135        self.details['thick_inter1'] = ['[A]', None, None]
136        self.details['thick_inter2'] = ['[A]', None, None]
137        self.details['thick_inter3'] = ['[A]', None, None]
138        self.details['thick_inter4'] = ['[A]', None, None]
139        self.details['thick_inter5'] = ['[A]', None, None]
140        self.details['thick_inter6'] = ['[A]', None, None]
141        self.details['thick_inter7'] = ['[A]', None, None]
142        self.details['thick_inter8'] = ['[A]', None, None]
143        self.details['thick_inter9'] = ['[A]', None, None]
144        self.details['thick_inter10'] = ['[A]', None, None]
145        self.details['thick_flat1'] = ['[A]', None, None]
146        self.details['thick_flat2'] = ['[A]', None, None]
147        self.details['thick_flat3'] = ['[A]', None, None]
148        self.details['thick_flat4'] = ['[A]', None, None]
149        self.details['thick_flat5'] = ['[A]', None, None]
150        self.details['thick_flat6'] = ['[A]', None, None]
151        self.details['thick_flat7'] = ['[A]', None, None]
152        self.details['thick_flat8'] = ['[A]', None, None]
153        self.details['thick_flat9'] = ['[A]', None, None]
154        self.details['thick_flat10'] = ['[A]', None, None]
155        self.details['func_inter1'] = ['', None, None]
156        self.details['func_inter2'] = ['', None, None]
157        self.details['func_inter3'] = ['', None, None]
158        self.details['func_inter4'] = ['', None, None]
159        self.details['func_inter5'] = ['', None, None]
160        self.details['func_inter6'] = ['', None, None]
161        self.details['func_inter7'] = ['', None, None]
162        self.details['func_inter8'] = ['', None, None]
163        self.details['func_inter9'] = ['', None, None]
164        self.details['func_inter10'] = ['', None, None]
165
166        ## fittable parameters
167        self.fixed=[]
168       
169        ## non-fittable parameters
170        self.non_fittable=['n_layers', 'func_inter0', 'func_inter1', 'func_inter2', 'func_inter3', 'func_inter4', 'func_inter5', 'func_inter5', 'func_inter7', 'func_inter8', 'func_inter9', 'func_inter10']
171       
172        ## parameters with orientation
173        self.orientation_params =[]
174   
175    def clone(self):
176        """ Return a identical copy of self """
177        return self._clone(ReflModel())   
178       
179    def __getstate__(self):
180        """
181        return object state for pickling and copying
182        """
183        model_state = {'params': self.params, 'dispersion': self.dispersion, 'log': self.log}
184       
185        return self.__dict__, model_state
186       
187    def __setstate__(self, state):
188        """
189        create object from pickled state
190       
191        :param state: the state of the current model
192       
193        """
194       
195        self.__dict__, model_state = state
196        self.params = model_state['params']
197        self.dispersion = model_state['dispersion']
198        self.log = model_state['log']
199       
200   
201    def run(self, x=0.0):
202        """
203        Evaluate the model
204       
205        :param x: input q, or [q,phi]
206       
207        :return: scattering function P(q)
208       
209        """
210       
211        return CReflModel.run(self, x)
212   
213    def runXY(self, x=0.0):
214        """
215        Evaluate the model in cartesian coordinates
216       
217        :param x: input q, or [qx, qy]
218       
219        :return: scattering function P(q)
220       
221        """
222       
223        return CReflModel.runXY(self, x)
224       
225    def evalDistribution(self, x=[]):
226        """
227        Evaluate the model in cartesian coordinates
228       
229        :param x: input q[], or [qx[], qy[]]
230       
231        :return: scattering function P(q[])
232       
233        """
234        return CReflModel.evalDistribution(self, x)
235       
236    def calculate_ER(self):
237        """
238        Calculate the effective radius for P(q)*S(q)
239       
240        :return: the value of the effective radius
241       
242        """       
243        return CReflModel.calculate_ER(self)
244       
245    def set_dispersion(self, parameter, dispersion):
246        """
247        Set the dispersion object for a model parameter
248       
249        :param parameter: name of the parameter [string]
250        :param dispersion: dispersion object of type DispersionModel
251       
252        """
253        return CReflModel.set_dispersion(self, parameter, dispersion.cdisp)
254       
255   
256# End of file
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