RPA10Model.py @ 045b567c

ESS_GUIESS_GUI_DocsESS_GUI_batch_fittingESS_GUI_bumps_abstractionESS_GUI_iss1116ESS_GUI_iss879ESS_GUI_iss959ESS_GUI_openclESS_GUI_orderingESS_GUI_sync_sascalccostrafo411magnetic_scattrelease-4.1.1release-4.1.2release-4.2.2release_4.0.1ticket-1009ticket-1094-headlessticket-1242-2d-resolutionticket-1243ticket-1249ticket885unittest-saveload

Last change on this file since 045b567c was 339ce67, checked in by Jae Cho <jhjcho@…>, 14 years ago
added some models and tests
Property mode set to `100644`
File size: 9.6 KB

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1
2	from sans.models.BaseComponent import BaseComponent
3	from sans.models.RPAModel import RPAModel
4	from copy import deepcopy
5	max_case_n = 10
6	class RPA10Model(BaseComponent):
7	"""
8	This multi-model is based on Parratt formalism and provides the capability
9	of changing the number of layers between 0 and 10.
10	"""
11	def __init__(self, multfactor=1):
12	BaseComponent.__init__(self)
13	"""
14	:param multfactor: number of cases in the model, assumes 0<= case# <=10.
15	"""
16
17	## Setting model name model description
18	self.description=""
19	model = RPAModel()
20	self.model = model
21	self.name = "RPA10Model"
22	self.description=model.description
23	self.case_num = multfactor
24	## Define parameters
25	self.params = {}
26
27	## Parameter details [units, min, max]
28	self.details = {}
29
30	# non-fittable parameters
31	self.non_fittable = model.non_fittable
32
33	# list of function in order of the function number
34	self.fun_list = self._get_func_list()
35	## dispersion
36	self._set_dispersion()
37	## Define parameters
38	self._set_params()
39
40	## Parameter details [units, min, max]
41	self._set_details()
42
43	#list of parameter that can be fitted
44	self._set_fixed_params()
45	self.model.params['lcase_n'] = self.case_num
46
47	## functional multiplicity of the model
48	self.multiplicity_info = [max_case_n,"Case No.:",["C/D Binary Mixture of Homopolymers",
49	"C-D Diblock Copolymer",
50	"B/C/D Ternary Mixture of Homopolymers",
51	"B/C-D Mixture of Homopolymer B and Diblock Copolymer C-D",
52	"B-C-D Triblock Copolymer",
53	"A/B/C/D Quaternary Mixture of Homopolymers",
54	"A/B/C-D Mixture of Homopolymer A/B and Diblock C-D",
55	"A/B-C-D Mixture of Homopolymer A and triblock B-C-D",
56	"A-B/C-D Mixture of Diblock Copolymer A-B and Diblock C-D",
57	"A-B-C-D Four-block Copolymer"],
58	[]]
59
60	def _clone(self, obj):
61	"""
62	Internal utility function to copy the internal
63	data members to a fresh copy.
64	"""
65	obj.params = deepcopy(self.params)
66	obj.non_fittable = deepcopy(self.non_fittable)
67	obj.description = deepcopy(self.description)
68	obj.details = deepcopy(self.details)
69	obj.dispersion = deepcopy(self.dispersion)
70	obj.model = self.model.clone()
71
72	return obj
73
74
75	def _set_dispersion(self):
76	"""
77	model dispersions
78	"""
79	##set dispersion from model
80	self.dispersion = {}
81
82
83	def _set_params(self):
84	"""
85	Concatenate the parameters of the model to create
86	this model parameters
87	"""
88	# set the case number first
89	self.model.params['lcase_n'] = self.case_num
90	# rearrange the parameters for the given # of shells
91	for name , value in self.model.params.iteritems():
92	if name == 'lcase_n':
93	continue
94	elif name.lower() == 'scale' or \
95	name.lower() == 'background':
96	self.params[name] = value
97	elif self.case_num <= 1:
98	if name.lower() == 'nc' or \
99	name.lower() == 'phic' or \
100	name.lower() == 'vc' or \
101	name.lower() == 'lc' or \
102	name.lower() == 'bc' or \
103	name.lower() == 'nd' or \
104	name.lower() == 'phid' or \
105	name.lower() == 'vd' or \
106	name.lower() == 'ld' or \
107	name.lower() == 'bd' or \
108	name.lower() == 'kcd':
109	self.params[name] = value
110	elif self.case_num > 1 and self.case_num <= 4:
111	if name.lower() == 'nb' or \
112	name.lower() == 'phib' or \
113	name.lower() == 'vb' or \
114	name.lower() == 'lb' or \
115	name.lower() == 'bb' or \
116	name.lower() == 'nc' or \
117	name.lower() == 'phic' or \
118	name.lower() == 'vc' or \
119	name.lower() == 'lc' or \
120	name.lower() == 'bc' or \
121	name.lower() == 'nd' or \
122	name.lower() == 'phid' or \
123	name.lower() == 'vd' or \
124	name.lower() == 'ld' or \
125	name.lower() == 'bd' or \
126	name.lower() == 'kbc' or \
127	name.lower() == 'kbd' or \
128	name.lower() == 'kcd' :
129	self.params[name] = value
130	else:
131	if name.lower() == 'na' or \
132	name.lower() == 'phia' or \
133	name.lower() == 'va' or \
134	name.lower() == 'la' or \
135	name.lower() == 'ba' or \
136	name.lower() == 'nb' or \
137	name.lower() == 'phib' or \
138	name.lower() == 'vb' or \
139	name.lower() == 'lb' or \
140	name.lower() == 'bb' or \
141	name.lower() == 'nc' or \
142	name.lower() == 'phic' or \
143	name.lower() == 'vc' or \
144	name.lower() == 'lc' or \
145	name.lower() == 'bc' or \
146	name.lower() == 'nd' or \
147	name.lower() == 'phid' or \
148	name.lower() == 'vd' or \
149	name.lower() == 'ld' or \
150	name.lower() == 'bd' or \
151	name.lower() == 'kab' or \
152	name.lower() == 'kac' or \
153	name.lower() == 'kad' or \
154	name.lower() == 'kbc' or \
155	name.lower() == 'kbd' or \
156	name.lower() == 'kcd' :
157	self.params[name] = value
158
159
160
161	def _set_details(self):
162	"""
163	Concatenate details of the original model to create
164	this model details
165	"""
166	for name ,detail in self.model.details.iteritems():
167	if name in self.params.iterkeys():
168	self.details[name]= detail
169
170	def _get_func_list(self):
171	"""
172	Get the list of functions in each cases
173	"""
174	func_list = {}
175	return func_list
176
177	def getProfile(self):
178	"""
179	Get SLD profile
180
181	: return: None, No SLD profile supporting for this model
182	"""
183	return None
184
185	def setParam(self, name, value):
186	"""
187	Set the value of a model parameter
188
189	: param name: name of the parameter
190	: param value: value of the parameter
191	"""
192	# set param to new model
193	self._setParamHelper( name, value)
194
195	self.model.setParam( name, value)
196
197	def _setParamHelper(self, name, value):
198	"""
199	Helper function to setParam
200	"""
201
202	# Look for standard parameter
203	for item in self.params.keys():
204	if item.lower()==name.lower():
205	self.params[item] = value
206	return
207
208	raise ValueError, "Model does not contain parameter %s" % name
209
210
211	def _set_fixed_params(self):
212	"""
213	Fill the self.fixed list with the model fixed list
214	"""
215	pass
216
217	def run(self, x = 0.0):
218	"""
219	Evaluate the model
220
221	:param x: input q, or [q,phi]
222
223	:return: scattering function P(q)
224
225	"""
226
227	return self.model.run(x)
228
229	def runXY(self, x = 0.0):
230	"""
231	Evaluate the model
232
233	: param x: input q-value (float or [float, float] as [qx, qy])
234	: return: scattering function value
235	"""
236
237	return self.model.runXY(x)
238
239	## Now (May27,10) directly uses the model eval function
240	## instead of the for-loop in Base Component.
241	def evalDistribution(self, x = []):
242	"""
243	Evaluate the model in cartesian coordinates
244
245	: param x: input q[], or [qx[], qy[]]
246	: return: scattering function P(q[])
247	"""
248	# set effective radius and scaling factor before run
249	return self.model.evalDistribution(x)
250	def calculate_ER(self):
251	"""
252	"""
253	return self.model.calculate_ER()
254	def set_dispersion(self, parameter, dispersion):
255	"""
256	Set the dispersion object for a model parameter
257
258	: param parameter: name of the parameter [string]
259	:dispersion: dispersion object of type DispersionModel
260	"""
261	pass

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source: sasview/sansmodels/src/sans/models/RPA10Model.py @ 045b567c

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